RNA–Protein interactions for RNA: ENSMUST00000009885.13

Ubp1-201, Transcript of Upstream-binding protein 1, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ubp1, Length 3,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-201ENSMUST00000009885 Ssh2Q5SW75 1423 aa23.21■■□□□ 1.31
Ubp1-201ENSMUST00000009885 Dusp27Q148W8 1138 aa23.21■■□□□ 1.31
Ubp1-201ENSMUST00000009885 Maco1Q7TQE6 664 aaKnown RBP23.21■■□□□ 1.31
Ubp1-201ENSMUST00000009885 G3bp1P97855 465 aaKnown RBP23.2■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Ush1cQ9ES64 910 aa23.2■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Prex2Q3LAC4 1598 aa23.19■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Plch2A2AP18 1501 aa23.19■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Gm16486A0A1D5RMD1 1434 aa23.19■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Zmym3Q9JLM4 1370 aa23.19■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Casq1O09165 405 aa23.18■■□□□ 1.3
Ubp1-201ENSMUST00000009885 IqubQ8CDK3 788 aa23.18■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Stk26Q99JT2 416 aa23.18■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Tpm2P58774 284 aa23.18■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Chmp4cQ9D7F7 232 aa23.17■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Plin1Q8CGN5 517 aa23.16■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Mlh3A0A1Y7VMP7 1443 aa23.16■■□□□ 1.3
Ubp1-201ENSMUST00000009885 PtprgQ05909 1442 aa23.16■■□□□ 1.3
Ubp1-201ENSMUST00000009885 1700019A02RikA0A087WPV9 146 aa23.16■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Rnf214Q8BFU3 668 aaKnown RBP23.16■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Trappc8E9PWG2 1437 aa23.15■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Dmrtc1Q9D9R7 182 aa23.15■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Dot1lQ6XZL8 1540 aa23.15■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Becn1O88597 448 aa23.15■■□□□ 1.3
Ubp1-201ENSMUST00000009885 Map4k4P97820 1233 aaKnown RBP23.14■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Rbm25B2RY56 838 aaKnown RBP23.13■■□□□ 1.29
Ubp1-201ENSMUST00000009885 U2surpQ6NV83 1029 aaKnown RBP23.13■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Q4VA45 678 aa23.13■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Isy1Q69ZQ2 285 aaKnown RBP23.12■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Arhgap5P97393 1501 aa23.12■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Tnnt2P50752 301 aa23.11■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Kif21aQ9QXL2 1672 aa23.11■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Sbno1Q689Z5 1390 aa23.11■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Puf60Q3UEB3 564 aaKnown RBP23.1■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Cald1E9QA15 768 aaKnown RBP23.1■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Arhgef11Q68FM7 1552 aa23.1■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Kiaa1107Q80TK0 1369 aa23.09■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Lrrc9Q8CDN9 1456 aa23.09■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Stard8Q8K031 1019 aa23.09■■□□□ 1.29
Ubp1-201ENSMUST00000009885 Shroom2A2ALU4 1481 aa23.08■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Chrna2Q91X60 512 aa23.07■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Adamts12Q811B3 1600 aa23.06■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Gapvd1Q6PAR5 1458 aa23.06■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Caskin1Q6P9K8 1431 aa23.06■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Fbxo2Q80UW2 297 aa23.06■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Dhx16G3X8X0 1044 aaKnown RBP23.05■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Nsd2Q8BVE8 1365 aa23.05■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Znf521Q6KAS7 1311 aa23.05■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Tarbp1E9Q368 1579 aa23.04■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Bag4Q8CI61 457 aa23.04■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Tbc1d9Q3UYK3 1264 aa23.03■■□□□ 1.28
Ubp1-201ENSMUST00000009885 Bloc1s4Q8VED2 215 aa23.02■■□□□ 1.28
Ubp1-201ENSMUST00000009885 ErbinQ80TH2 1402 aa23.01■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Kif2cQ922S8 721 aa23.01■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Gm10093D3YYI8 482 aa23.01■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Hdac1O09106 482 aaKnown RBP23.01■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Clcn1Q64347 994 aa23■■□□□ 1.27
Ubp1-201ENSMUST00000009885 MsnP26041 577 aaKnown RBP23■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Rasa1E9PYG6 1038 aa23■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Fam135bQ9DAI6 1403 aa22.99■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Birc3O08863 600 aa22.99■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Tex2Q6ZPJ0 1128 aaKnown RBP22.99■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Triml2E9PW10 424 aa22.99■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Pcmtd1P59913 357 aa22.98■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Prdm16A2A935 1275 aa22.98■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Brd1E9PZ26 1189 aaKnown RBP22.97■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Gpatch11Q3UFS4 262 aa22.97■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Eif4g2Q62448 906 aaKnown RBP22.97■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Zranb1Q7M760 708 aa22.97■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Fez1Q8K0X8 392 aa22.97■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Kiaa1551Q5DTW7 1521 aa22.97■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Syce3B5KM66 88 aa22.97■■□□□ 1.27
Ubp1-201ENSMUST00000009885 CastP51125 788 aa22.97■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Eif4g3Q80XI3 1579 aaKnown RBP22.97■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Rbm27Q5SFM8 1060 aaKnown RBP22.97■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Chmp4bQ9D8B3 224 aaKnown RBP22.97■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Casc1Q6TDU8 730 aa22.96■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Cetn4Q8K4K1 168 aa22.96■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Trpm2Q91YD4 1506 aa22.96■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Pibf1E9Q6K3 756 aa22.96■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Irf5P56477 497 aa22.96■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Nol12Q8BG17 217 aa22.96■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Tmx3Q8BXZ1 456 aa22.96■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Zfp91Q62511 572 aa22.95■■□□□ 1.27
Ubp1-201ENSMUST00000009885 Gm14025A2AP89 1413 aa22.95■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Wdr63B2RY71 923 aa22.95■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Zkscan1Q8BGS3 561 aaKnown RBP22.95■■□□□ 1.26
Ubp1-201ENSMUST00000009885 1700010I14RikQ7TPG0 532 aa22.95■■□□□ 1.26
Ubp1-201ENSMUST00000009885 P2rx7Q9Z1M0 595 aa22.95■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Cavin4A2AMM0 362 aa22.94■■□□□ 1.26
Ubp1-201ENSMUST00000009885 HnrnpuQ8VEK3 800 aaKnown RBP22.94■■□□□ 1.26
Ubp1-201ENSMUST00000009885 CarsQ9ER72 831 aaKnown RBP22.94■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Cdc42bpaQ3UU96 1719 aa22.94■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Pank2Q3U4S0 443 aa22.94■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Hsp90b1P08113 802 aaKnown RBP22.93■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Cc2d1aQ8K1A6 943 aa22.93■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Mapkbp1Q6NS57 1503 aa22.93■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Iqgap1Q9JKF1 1657 aaKnown RBP22.93■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Col17a1Q07563 1470 aa22.92■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Gripap1Q8VD04 806 aa22.92■■□□□ 1.26
Ubp1-201ENSMUST00000009885 Ddit3P35639 168 aa22.92■■□□□ 1.26
Retrieved 100 of 22,080 RNA–protein pairs in 39.9 ms