RNA–Protein interactions for RNA: snR42

snR42, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR42, Length 351 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR42snR42 YOR072WQ08486 104 aa1.93□□□□□ -2.1
snR42snR42 NHP2P32495 156 aaPredicted RBP1.92□□□□□ -2.1
snR42snR42 YHL018WP38744 120 aaPredicted RBP1.92□□□□□ -2.1
snR42snR42 FYV7Q12247 151 aa1.92□□□□□ -2.1
snR42snR42 YAL063C-AQ3E791 96 aa1.92□□□□□ -2.1
snR42snR42 RPL36BO14455 100 aaKnown RBP1.91□□□□□ -2.1
snR42snR42 YBR027CP38220 110 aa1.91□□□□□ -2.1
snR42snR42 YER181CP40097 107 aa1.91□□□□□ -2.1
snR42snR42 PAI3P01094 68 aa1.9□□□□□ -2.11
snR42snR42 HHF1P02309 103 aaKnown RBP1.9□□□□□ -2.11
snR42snR42 SFT1P43682 97 aa1.9□□□□□ -2.11
snR42snR42 HUR1P45820 110 aa1.9□□□□□ -2.11
snR42snR42 MPC3P53311 146 aa1.9□□□□□ -2.11
snR42snR42 YLR363W-AQ3E747 85 aa1.9□□□□□ -2.11
snR42snR42 YAR1P46683 200 aa1.89□□□□□ -2.11
snR42snR42 OST2P46964 130 aa1.89□□□□□ -2.11
snR42snR42 YNL184CP53876 108 aa1.89□□□□□ -2.11
snR42snR42 SAE3P89114 91 aa1.89□□□□□ -2.11
snR42snR42 TSC3Q3E790 80 aa1.89□□□□□ -2.11
snR42snR42 YER078W-AQ3E7A2 54 aa1.89□□□□□ -2.11
snR42snR42 POP7P38291 140 aa1.88□□□□□ -2.11
snR42snR42 YHL005CP38752 130 aa1.88□□□□□ -2.11
snR42snR42 CWC27Q02770 301 aa1.88□□□□□ -2.11
snR42snR42 LSM6Q06406 86 aaKnown RBP1.88□□□□□ -2.11
snR42snR42 COX7P10174 60 aa1.87□□□□□ -2.11
snR42snR42 MSA2P36157 363 aa1.87□□□□□ -2.11
snR42snR42 LSM8P47093 109 aaKnown RBP1.87□□□□□ -2.11
snR42snR42 YDL085C-AQ3E7B7 68 aaKnown RBP1.87□□□□□ -2.11
snR42snR42 YLR157W-DP0CE99 70 aa1.86□□□□□ -2.11
snR42snR42 RSM18P40033 138 aa1.86□□□□□ -2.11
snR42snR42 GLC8P41818 229 aa1.86□□□□□ -2.11
snR42snR42 YPL080CQ02826 108 aa1.85□□□□□ -2.11
snR42snR42 YJR107C-AP0CT86 78 aa1.84□□□□□ -2.11
snR42snR42 DSE2P38844 325 aa1.83□□□□□ -2.12
snR42snR42 YNL122CP53921 115 aaPredicted RBP1.83□□□□□ -2.12
snR42snR42 YLR296WQ05898 108 aa1.83□□□□□ -2.12
snR42snR42 YOL097W-AQ3E7Y9 61 aa1.83□□□□□ -2.12
snR42snR42 TDA8Q6B2U8 126 aa1.83□□□□□ -2.12
snR42snR42 YHR213W-BQ8TGK1 99 aa1.83□□□□□ -2.12
snR42snR42 RSM19P53733 91 aaPredicted RBP1.82□□□□□ -2.12
snR42snR42 ATP18P81450 59 aa1.82□□□□□ -2.12
snR42snR42 YEL045CP32616 141 aa1.81□□□□□ -2.12
snR42snR42 YLR162WQ06235 118 aa1.81□□□□□ -2.12
snR42snR42 YIL102C-AQ2V2P5 75 aa1.81□□□□□ -2.12
snR42snR42 YJL133C-AQ3E7A3 74 aa1.81□□□□□ -2.12
snR42snR42 MIC10Q96VH5 97 aa1.81□□□□□ -2.12
snR42snR42 YFR009W-AP0C5M9 85 aa1.8□□□□□ -2.12
snR42snR42 ICS3P47034 131 aa1.8□□□□□ -2.12
snR42snR42 RPL38P49167 78 aaKnown RBP1.8□□□□□ -2.12
snR42snR42 RPL37BP51402 88 aaKnown RBP1.8□□□□□ -2.12
snR42snR42 COF1Q03048 143 aaKnown RBP1.8□□□□□ -2.12
snR42snR42 TDA2P40045 126 aa1.79□□□□□ -2.12
snR42snR42 ECM19Q06011 112 aa1.79□□□□□ -2.12
snR42snR42 YOR304C-AO14468 76 aa1.78□□□□□ -2.12
snR42snR42 YER187WP40102 141 aa1.78□□□□□ -2.12
snR42snR42 YHL042WP38729 150 aa1.77□□□□□ -2.13
snR42snR42 COX23P38824 151 aa1.77□□□□□ -2.13
snR42snR42 YNL198CP40166 100 aa1.77□□□□□ -2.13
snR42snR42 SHH4Q06236 168 aa1.77□□□□□ -2.13
snR42snR42 YLR361C-AQ3E795 98 aa1.77□□□□□ -2.13
snR42snR42 ISD11Q6Q560 94 aa1.77□□□□□ -2.13
snR42snR42 PBI2P0CT04 75 aaKnown RBP1.76□□□□□ -2.13
snR42snR42 YDR381C-AQ3E6R5 114 aa1.76□□□□□ -2.13
snR42snR42 YPR170W-BP0C5R9 85 aa1.75□□□□□ -2.13
snR42snR42 EDC1P53080 175 aaPredicted RBP1.75□□□□□ -2.13
snR42snR42 YOL014WQ08110 124 aa1.74□□□□□ -2.13
snR42snR42 FYV12Q08559 129 aa1.74□□□□□ -2.13
snR42snR42 RPL36AP05745 100 aaPredicted RBP1.73□□□□□ -2.13
snR42snR42 RAD6P06104 172 aa1.73□□□□□ -2.13
snR42snR42 RPA12P32529 125 aaKnown RBP1.73□□□□□ -2.13
snR42snR42 ATP20Q12233 115 aa1.73□□□□□ -2.13
snR42snR42 Q0017Q9ZZX8 53 aa1.73□□□□□ -2.13
snR42snR42 YHR073W-AP0C5N7 58 aa1.72□□□□□ -2.13
snR42snR42 YAR064WP39563 99 aa1.72□□□□□ -2.13
snR42snR42 YCR050CP25630 102 aa1.71□□□□□ -2.14
snR42snR42 LSO2Q3E772 92 aaKnown RBP1.71□□□□□ -2.14
snR42snR42 YAL067W-AQ8TGK6 75 aa1.71□□□□□ -2.14
snR42snR42 YBR121C-AP0C5L4 52 aa1.7□□□□□ -2.14
snR42snR42 YCR085WP25650 117 aa1.7□□□□□ -2.14
snR42snR42 SKI6P46948 246 aaPredicted RBP1.7□□□□□ -2.14
snR42snR42 YDL012CQ12489 107 aa1.7□□□□□ -2.14
snR42snR42 YOR316C-AQ3E806 69 aa1.7□□□□□ -2.14
snR42snR42 ATX1P38636 73 aa1.69□□□□□ -2.14
snR42snR42 YGL034CP53186 121 aa1.69□□□□□ -2.14
snR42snR42 YPR153WQ06537 140 aa1.69□□□□□ -2.14
snR42snR42 EMC6Q12431 108 aa1.69□□□□□ -2.14
snR42snR42 YJL144WP47009 104 aa1.68□□□□□ -2.14
snR42snR42 YJR128WP47162 119 aa1.68□□□□□ -2.14
snR42snR42 YGR164WP53291 111 aa1.68□□□□□ -2.14
snR42snR42 YLR285C-AQ3E771 56 aa1.68□□□□□ -2.14
snR42snR42 INO4P13902 151 aa1.67□□□□□ -2.14
snR42snR42 YJL009WP47078 108 aa1.67□□□□□ -2.14
snR42snR42 YKL183C-AQ3E765 70 aa1.67□□□□□ -2.14
snR42snR42 YBL008W-AQ3E821 79 aa1.66□□□□□ -2.14
snR42snR42 YIL102CP40488 101 aa1.65□□□□□ -2.15
snR42snR42 YGR039WP53225 103 aa1.65□□□□□ -2.15
snR42snR42 YFL041W-AQ3E817 63 aa1.65□□□□□ -2.15
snR42snR42 YDR210WQ03482 75 aa1.64□□□□□ -2.15
snR42snR42 YSY6P38374 65 aa1.63□□□□□ -2.15
snR42snR42 COX8P04039 78 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms