RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W YIL002W-AQ3E7Z5 69 aa2.55□□□□□ -2
SSO1YPL232W YKL044WP36092 106 aa2.54□□□□□ -2
SSO1YPL232W CWC27Q02770 301 aa2.54□□□□□ -2
SSO1YPL232W YOR034C-AQ3E735 80 aa2.54□□□□□ -2
SSO1YPL232W TDA8Q6B2U8 126 aa2.54□□□□□ -2
SSO1YPL232W YJL009WP47078 108 aa2.53□□□□□ -2
SSO1YPL232W SCS22Q6Q595 175 aa2.53□□□□□ -2
SSO1YPL232W YFR057WP43625 151 aa2.52□□□□□ -2.01
SSO1YPL232W FYV7Q12247 151 aa2.52□□□□□ -2.01
SSO1YPL232W OST2P46964 130 aa2.51□□□□□ -2.01
SSO1YPL232W MRPL44P19956 98 aa2.5□□□□□ -2.01
SSO1YPL232W DSE2P38844 325 aa2.5□□□□□ -2.01
SSO1YPL232W MPC3P53311 146 aa2.5□□□□□ -2.01
SSO1YPL232W ZEO1Q08245 113 aa2.5□□□□□ -2.01
SSO1YPL232W YHR130CP38834 111 aa2.48□□□□□ -2.01
SSO1YPL232W GTT1P40582 234 aa2.48□□□□□ -2.01
SSO1YPL232W YAR1P46683 200 aa2.48□□□□□ -2.01
SSO1YPL232W CNL1Q06333 122 aa2.48□□□□□ -2.01
SSO1YPL232W RSM19P53733 91 aaPredicted RBP2.47□□□□□ -2.01
SSO1YPL232W SHH4Q06236 168 aa2.47□□□□□ -2.01
SSO1YPL232W SEC11P15367 167 aa2.46□□□□□ -2.02
SSO1YPL232W COF1Q03048 143 aaKnown RBP2.46□□□□□ -2.02
SSO1YPL232W YGL230CP53074 147 aa2.45□□□□□ -2.02
SSO1YPL232W NHP2P32495 156 aaPredicted RBP2.44□□□□□ -2.02
SSO1YPL232W YLR162WQ06235 118 aa2.44□□□□□ -2.02
SSO1YPL232W MIC10Q96VH5 97 aa2.43□□□□□ -2.02
SSO1YPL232W YHR073W-AP0C5N7 58 aa2.42□□□□□ -2.02
SSO1YPL232W YER187WP40102 141 aa2.42□□□□□ -2.02
SSO1YPL232W CGR1P53188 120 aa2.42□□□□□ -2.02
SSO1YPL232W YGL034CP53186 121 aa2.41□□□□□ -2.02
SSO1YPL232W ECM19Q06011 112 aa2.41□□□□□ -2.02
SSO1YPL232W COA6Q3E846 104 aa2.41□□□□□ -2.02
SSO1YPL232W EDC1P53080 175 aaPredicted RBP2.4□□□□□ -2.03
SSO1YPL232W MSL1P40567 111 aaPredicted RBP2.39□□□□□ -2.03
SSO1YPL232W HUR1P45820 110 aa2.39□□□□□ -2.03
SSO1YPL232W YDL012CQ12489 107 aa2.39□□□□□ -2.03
SSO1YPL232W YHR213W-BQ8TGK1 99 aa2.39□□□□□ -2.03
SSO1YPL232W YGR164WP53291 111 aa2.38□□□□□ -2.03
SSO1YPL232W TSC3Q3E790 80 aa2.38□□□□□ -2.03
SSO1YPL232W YJL133C-AQ3E7A3 74 aa2.38□□□□□ -2.03
SSO1YPL232W CUE4Q04201 117 aaPredicted RBP2.36□□□□□ -2.03
SSO1YPL232W YPR153WQ06537 140 aa2.36□□□□□ -2.03
SSO1YPL232W YLR361C-AQ3E795 98 aa2.35□□□□□ -2.03
SSO1YPL232W YFR009W-AP0C5M9 85 aa2.34□□□□□ -2.03
SSO1YPL232W YIL134C-AQ45U18 67 aa2.34□□□□□ -2.03
SSO1YPL232W YBR016WP38216 128 aa2.33□□□□□ -2.04
SSO1YPL232W ELC1Q03071 99 aa2.33□□□□□ -2.04
SSO1YPL232W YOR316C-AQ3E806 69 aa2.33□□□□□ -2.04
SSO1YPL232W YJR107C-AP0CT86 78 aa2.32□□□□□ -2.04
SSO1YPL232W ICS3P47034 131 aa2.32□□□□□ -2.04
SSO1YPL232W ATP18P81450 59 aa2.32□□□□□ -2.04
SSO1YPL232W SEN15Q04675 128 aa2.32□□□□□ -2.04
SSO1YPL232W YJL144WP47009 104 aa2.3□□□□□ -2.04
SSO1YPL232W YPL080CQ02826 108 aa2.3□□□□□ -2.04
SSO1YPL232W SSS1P35179 80 aa2.29□□□□□ -2.04
SSO1YPL232W COX23P38824 151 aa2.29□□□□□ -2.04
SSO1YPL232W POP7P38291 140 aa2.28□□□□□ -2.04
SSO1YPL232W YLR296WQ05898 108 aa2.28□□□□□ -2.04
SSO1YPL232W YER181CP40097 107 aa2.27□□□□□ -2.05
SSO1YPL232W LSM6Q06406 86 aaKnown RBP2.27□□□□□ -2.05
SSO1YPL232W RPL36AP05745 100 aaPredicted RBP2.26□□□□□ -2.05
SSO1YPL232W YBR121C-AP0C5L4 52 aa2.26□□□□□ -2.05
SSO1YPL232W YOL014WQ08110 124 aa2.25□□□□□ -2.05
SSO1YPL232W NAT5Q08689 176 aa2.25□□□□□ -2.05
SSO1YPL232W YKL183C-AQ3E765 70 aa2.25□□□□□ -2.05
SSO1YPL232W PAI3P01094 68 aa2.23□□□□□ -2.05
SSO1YPL232W RPL37AP49166 88 aaKnown RBP2.23□□□□□ -2.05
SSO1YPL232W YML054C-AQ3E809 52 aa2.23□□□□□ -2.05
SSO1YPL232W YAR064WP39563 99 aa2.22□□□□□ -2.05
SSO1YPL232W SKI6P46948 246 aaPredicted RBP2.22□□□□□ -2.05
SSO1YPL232W ISD11Q6Q560 94 aa2.22□□□□□ -2.05
SSO1YPL232W YLR255CO13574 117 aa2.19□□□□□ -2.06
SSO1YPL232W YDR381C-AQ3E6R5 114 aa2.18□□□□□ -2.06
SSO1YPL232W YLR363W-AQ3E747 85 aa2.18□□□□□ -2.06
SSO1YPL232W YOR304C-AO14468 76 aa2.17□□□□□ -2.06
SSO1YPL232W TDA2P40045 126 aa2.16□□□□□ -2.06
SSO1YPL232W YCR050CP25630 102 aa2.15□□□□□ -2.07
SSO1YPL232W HHF1P02309 103 aaKnown RBP2.14□□□□□ -2.07
SSO1YPL232W RPL38P49167 78 aaKnown RBP2.14□□□□□ -2.07
SSO1YPL232W LIP1Q03579 150 aa2.14□□□□□ -2.07
SSO1YPL232W YHL042WP38729 150 aa2.13□□□□□ -2.07
SSO1YPL232W YBL008W-AQ3E821 79 aa2.11□□□□□ -2.07
SSO1YPL232W YER078W-AQ3E7A2 54 aa2.09□□□□□ -2.07
SSO1YPL232W RPS28BP0C0X0 67 aaKnown RBP2.08□□□□□ -2.08
SSO1YPL232W YBL044WP38194 122 aa2.08□□□□□ -2.08
SSO1YPL232W RPS28AQ3E7X9 67 aaPredicted RBP2.08□□□□□ -2.08
SSO1YPL232W ATP20Q12233 115 aa2.07□□□□□ -2.08
SSO1YPL232W LSO2Q3E772 92 aaKnown RBP2.06□□□□□ -2.08
SSO1YPL232W YDL085C-AQ3E7B7 68 aaKnown RBP2.06□□□□□ -2.08
SSO1YPL232W RAD6P06104 172 aa2.05□□□□□ -2.08
SSO1YPL232W YML108WQ03759 105 aa2.05□□□□□ -2.08
SSO1YPL232W YIL102C-AQ2V2P5 75 aa2.05□□□□□ -2.08
SSO1YPL232W COX8P04039 78 aa2.04□□□□□ -2.08
SSO1YPL232W RPA12P32529 125 aaKnown RBP2.04□□□□□ -2.08
SSO1YPL232W YGR146C-AQ8TGT9 53 aa2.04□□□□□ -2.08
SSO1YPL232W RPS30AP0CX33 63 aaKnown RBP2.03□□□□□ -2.08
SSO1YPL232W RPS30BP0CX34 63 aaKnown RBP2.03□□□□□ -2.08
SSO1YPL232W YIL156W-BQ2V2P4 73 aa2.01□□□□□ -2.09
SSO1YPL232W PBI2P0CT04 75 aaKnown RBP2□□□□□ -2.09
SSO1YPL232W SAE3P89114 91 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 63.5 ms