RNA–Protein interactions for RNA: YPL160W

CDC60, Transcript of Cytosolic leucyl tRNA synthetase, yeastyeast

Gene CDC60, Length 3,273 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC60YPL160W YEL067CP39978 195 aa1.34□□□□□ -2.2
CDC60YPL160W DAD4P69851 72 aa1.34□□□□□ -2.2
CDC60YPL160W RDS3Q06835 107 aaPredicted RBP1.34□□□□□ -2.2
CDC60YPL160W YGL149WP53116 101 aa1.34□□□□□ -2.2
CDC60YPL160W YPR195CQ06594 109 aa1.34□□□□□ -2.2
CDC60YPL160W YCL048W-AQ2V2Q2 79 aa1.34□□□□□ -2.2
CDC60YPL160W YLR307C-AQ3E825 87 aa1.34□□□□□ -2.2
CDC60YPL160W MIC10Q96VH5 97 aa1.34□□□□□ -2.2
CDC60YPL160W LST8P41318 303 aa1.33□□□□□ -2.2
CDC60YPL160W ICS3P47034 131 aa1.33□□□□□ -2.2
CDC60YPL160W YPR013CQ12145 317 aa1.33□□□□□ -2.2
CDC60YPL160W YOL166W-AQ8TGJ1 51 aa1.33□□□□□ -2.2
CDC60YPL160W YPL261CQ08976 102 aa1.33□□□□□ -2.2
CDC60YPL160W HUG1Q6Q5K6 68 aa1.33□□□□□ -2.2
CDC60YPL160W HMRA2P0CY13 119 aa1.32□□□□□ -2.2
CDC60YPL160W HSP150P32478 413 aa1.32□□□□□ -2.2
CDC60YPL160W IMP2P46972 177 aa1.32□□□□□ -2.2
CDC60YPL160W RPL29P05747 59 aaPredicted RBP1.32□□□□□ -2.2
CDC60YPL160W YER188C-AP0C0V2 99 aa1.32□□□□□ -2.2
CDC60YPL160W FYV5P25585 152 aa1.32□□□□□ -2.2
CDC60YPL160W HUB1Q6Q546 73 aa1.32□□□□□ -2.2
CDC60YPL160W COX8P04039 78 aa1.32□□□□□ -2.2
CDC60YPL160W YCR001WP25347 104 aa1.32□□□□□ -2.2
CDC60YPL160W RGM1Q00453 211 aa1.32□□□□□ -2.2
CDC60YPL160W NCE101Q02820 53 aa1.32□□□□□ -2.2
CDC60YPL160W IRC21Q04772 201 aa1.32□□□□□ -2.2
CDC60YPL160W CDC39P25655 2108 aaKnown RBP1.31□□□□□ -2.2
CDC60YPL160W ATP18P81450 59 aa1.31□□□□□ -2.2
CDC60YPL160W YDR114CQ04597 100 aa1.31□□□□□ -2.2
CDC60YPL160W CMC4Q3E7A9 73 aa1.31□□□□□ -2.2
CDC60YPL160W GIS2P53849 153 aaKnown RBP RIP-Chip data1.31□□□□□ -2.2not detected
CDC60YPL160W SED1Q01589 338 aa1.31□□□□□ -2.2
CDC60YPL160W YBL071CP38185 102 aa1.3□□□□□ -2.2
CDC60YPL160W YMR141CP40211 102 aa1.3□□□□□ -2.2
CDC60YPL160W YIL163CP40448 117 aa1.3□□□□□ -2.2
CDC60YPL160W YJL144WP47009 104 aa1.3□□□□□ -2.2
CDC60YPL160W YOR008C-AQ3E7B9 74 aa1.3□□□□□ -2.2
CDC60YPL160W OST5Q92316 86 aa1.3□□□□□ -2.2
CDC60YPL160W ERI1P62651 68 aaKnown RBP1.3□□□□□ -2.2
CDC60YPL160W CCW12Q12127 133 aa1.3□□□□□ -2.2
CDC60YPL160W QCR10P37299 77 aa1.29□□□□□ -2.2
CDC60YPL160W COX23P38824 151 aa1.29□□□□□ -2.2
CDC60YPL160W TDA2P40045 126 aa1.29□□□□□ -2.2
CDC60YPL160W SOM1Q05676 74 aa1.29□□□□□ -2.2
CDC60YPL160W ATP17Q06405 101 aa1.29□□□□□ -2.2
CDC60YPL160W YSF3P0C074 85 aaPredicted RBP1.29□□□□□ -2.2
CDC60YPL160W Q0297Q9ZZV8 51 aa1.29□□□□□ -2.2
CDC60YPL160W CYR1P08678 2026 aaKnown RBP1.28□□□□□ -2.2
CDC60YPL160W MRX7P53869 86 aa1.28□□□□□ -2.2
CDC60YPL160W YMR122CQ03879 124 aa1.28□□□□□ -2.2
CDC60YPL160W YJR107C-AP0CT86 78 aa1.28□□□□□ -2.21
CDC60YPL160W YPR153WQ06537 140 aa1.27□□□□□ -2.21
CDC60YPL160W YNL190WP53872 204 aa1.27□□□□□ -2.21
CDC60YPL160W YOL097W-AQ3E7Y9 61 aa1.27□□□□□ -2.21
CDC60YPL160W DSE2P38844 325 aa1.27□□□□□ -2.21
CDC60YPL160W POR2P40478 281 aa1.27□□□□□ -2.21
CDC60YPL160W YIR020CP40575 100 aa1.27□□□□□ -2.21
CDC60YPL160W YOR032W-AQ8TGS1 66 aa1.27□□□□□ -2.21
CDC60YPL160W YEL008WP40001 126 aa1.26□□□□□ -2.21
CDC60YPL160W TOM7P53507 60 aa1.26□□□□□ -2.21
CDC60YPL160W HOR7Q05827 59 aa1.26□□□□□ -2.21
CDC60YPL160W YLR285C-AQ3E771 56 aa1.26□□□□□ -2.21
CDC60YPL160W RPS11AP0CX47 156 aaKnown RBP1.26□□□□□ -2.21
CDC60YPL160W RPS11BP0CX48 156 aaKnown RBP1.26□□□□□ -2.21
CDC60YPL160W EDC1P53080 175 aaPredicted RBP1.26□□□□□ -2.21
CDC60YPL160W RTC6O14464 93 aa1.25□□□□□ -2.21
CDC60YPL160W MRPL38P35996 138 aaPredicted RBP1.25□□□□□ -2.21
CDC60YPL160W NOP10Q6Q547 58 aaPredicted RBP1.25□□□□□ -2.21
CDC60YPL160W YFR009W-AP0C5M9 85 aa1.25□□□□□ -2.21
CDC60YPL160W BSC4P53841 131 aa1.25□□□□□ -2.21
CDC60YPL160W RRT15Q3E811 62 aa1.25□□□□□ -2.21
CDC60YPL160W TAR1Q8TGM6 124 aa1.25□□□□□ -2.21
CDC60YPL160W YBR027CP38220 110 aa1.24□□□□□ -2.21
CDC60YPL160W SDH6Q3E785 79 aa1.24□□□□□ -2.21
CDC60YPL160W RPS30AP0CX33 63 aaKnown RBP1.24□□□□□ -2.21
CDC60YPL160W RPS30BP0CX34 63 aaKnown RBP1.24□□□□□ -2.21
CDC60YPL160W YBR200W-AQ3E755 54 aa1.24□□□□□ -2.21
CDC60YPL160W YEL014CP39999 101 aa1.23□□□□□ -2.21
CDC60YPL160W DYN1P36022 4092 aa1.23□□□□□ -2.21
CDC60YPL160W YGR025WP53216 100 aa1.23□□□□□ -2.21
CDC60YPL160W YNL146C-AQ3E7Z1 64 aa1.23□□□□□ -2.21
CDC60YPL160W YOR011W-AQ3E807 68 aa1.23□□□□□ -2.21
CDC60YPL160W YPR010C-AA5Z2X5 72 aa1.23□□□□□ -2.21
CDC60YPL160W YIL086CP40503 102 aa1.23□□□□□ -2.21
CDC60YPL160W DDR2P89113 61 aa1.23□□□□□ -2.21
CDC60YPL160W YLL006W-AQ3E814 58 aa1.23□□□□□ -2.21
CDC60YPL160W YOL013W-AP0C272 63 aaPredicted RBP1.22□□□□□ -2.21
CDC60YPL160W AQY2P0CD90 149 aa1.22□□□□□ -2.21
CDC60YPL160W YBR230W-AQ3E762 66 aa1.22□□□□□ -2.21
CDC60YPL160W YBR219CP38317 127 aa1.22□□□□□ -2.21
CDC60YPL160W LCL2Q08045 131 aa1.22□□□□□ -2.21
CDC60YPL160W YHR086W-AQ3E746 53 aa1.22□□□□□ -2.21
CDC60YPL160W BLM10P43583 2143 aa1.22□□□□□ -2.21
CDC60YPL160W YOR192C-CQ3E736 78 aa1.21□□□□□ -2.21
CDC60YPL160W YNL042W-BQ3E7Z2 85 aa1.21□□□□□ -2.21
CDC60YPL160W YCR095W-AQ3E787 52 aa1.21□□□□□ -2.22
CDC60YPL160W YMR001C-AQ8TGS9 76 aa1.21□□□□□ -2.22
CDC60YPL160W SNA2P56508 79 aa1.21□□□□□ -2.22
CDC60YPL160W YMR122W-AQ3E842 84 aa1.21□□□□□ -2.22
CDC60YPL160W YHR007C-AQ07074 71 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms