RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W YBR230W-AQ3E762 66 aa2.43□□□□□ -2.02
MSD1YPL104W INO4P13902 151 aa2.43□□□□□ -2.02
MSD1YPL104W PBI2P0CT04 75 aaKnown RBP2.42□□□□□ -2.02
MSD1YPL104W FYV5P25585 152 aa2.42□□□□□ -2.02
MSD1YPL104W YNL042W-BQ3E7Z2 85 aa2.42□□□□□ -2.02
MSD1YPL104W YJL127C-BQ3E828 52 aa2.42□□□□□ -2.02
MSD1YPL104W ATP18P81450 59 aa2.41□□□□□ -2.02
MSD1YPL104W YGL193CP53097 103 aa2.41□□□□□ -2.02
MSD1YPL104W YDR381C-AQ3E6R5 114 aa2.41□□□□□ -2.02
MSD1YPL104W TSC3Q3E790 80 aa2.41□□□□□ -2.02
MSD1YPL104W YAL063C-AQ3E791 96 aa2.41□□□□□ -2.02
MSD1YPL104W YER039C-AP0CD97 72 aa2.4□□□□□ -2.02
MSD1YPL104W SFT1P43682 97 aa2.4□□□□□ -2.02
MSD1YPL104W SKI6P46948 246 aaPredicted RBP2.4□□□□□ -2.02
MSD1YPL104W YLR156WP0CE96 114 aa2.39□□□□□ -2.03
MSD1YPL104W YLR159WP0CE97 114 aa2.39□□□□□ -2.03
MSD1YPL104W YLR161WP0CE98 114 aa2.39□□□□□ -2.03
MSD1YPL104W BET1P22804 142 aa2.39□□□□□ -2.03
MSD1YPL104W MMS2P53152 137 aa2.39□□□□□ -2.03
MSD1YPL104W YGL034CP53186 121 aa2.39□□□□□ -2.03
MSD1YPL104W DDR2P89113 61 aa2.39□□□□□ -2.03
MSD1YPL104W YMR230W-AQ3E7B5 62 aa2.39□□□□□ -2.03
MSD1YPL104W YFR009W-AP0C5M9 85 aa2.38□□□□□ -2.03
MSD1YPL104W LCL2Q08045 131 aa2.38□□□□□ -2.03
MSD1YPL104W ISD11Q6Q560 94 aa2.38□□□□□ -2.03
MSD1YPL104W YBL008W-AQ3E821 79 aa2.38□□□□□ -2.03
MSD1YPL104W KRE1P17260 313 aa2.37□□□□□ -2.03
MSD1YPL104W EDC2P40023 145 aaPredicted RBP2.37□□□□□ -2.03
MSD1YPL104W GAT4P40569 121 aa2.37□□□□□ -2.03
MSD1YPL104W YFL065CP43539 102 aa2.37□□□□□ -2.03
MSD1YPL104W RSM19P53733 91 aaPredicted RBP2.37□□□□□ -2.03
MSD1YPL104W YPR203WQ08994 102 aa2.37□□□□□ -2.03
MSD1YPL104W YFL041W-AQ3E817 63 aa2.37□□□□□ -2.03
MSD1YPL104W BSC4P53841 131 aa2.36□□□□□ -2.03
MSD1YPL104W YOR072WQ08486 104 aa2.36□□□□□ -2.03
MSD1YPL104W YAL067W-AQ8TGK6 75 aa2.36□□□□□ -2.03
MSD1YPL104W YHR139C-AO13536 103 aa2.36□□□□□ -2.03
MSD1YPL104W RPL36BO14455 100 aaKnown RBP2.36□□□□□ -2.03
MSD1YPL104W LCL1Q02786 101 aa2.36□□□□□ -2.03
MSD1YPL104W YHR007C-AQ07074 71 aa2.36□□□□□ -2.03
MSD1YPL104W EMC6Q12431 108 aa2.36□□□□□ -2.03
MSD1YPL104W RAD6P06104 172 aa2.35□□□□□ -2.03
MSD1YPL104W EDC1P53080 175 aaPredicted RBP2.35□□□□□ -2.03
MSD1YPL104W GIS2P53849 153 aaKnown RBP RIP-Chip data2.35□□□□□ -2.03not detected
MSD1YPL104W ECM19Q06011 112 aa2.35□□□□□ -2.03
MSD1YPL104W TDA2P40045 126 aa2.34□□□□□ -2.03
MSD1YPL104W ICS3P47034 131 aa2.34□□□□□ -2.03
MSD1YPL104W YHR213W-BQ8TGK1 99 aa2.34□□□□□ -2.03
MSD1YPL104W RPL38P49167 78 aaKnown RBP2.34□□□□□ -2.04
MSD1YPL104W YJL133C-AQ3E7A3 74 aa2.34□□□□□ -2.04
MSD1YPL104W YGR121W-AQ3E816 71 aa2.34□□□□□ -2.04
MSD1YPL104W YHL042WP38729 150 aa2.33□□□□□ -2.04
MSD1YPL104W COX23P38824 151 aa2.33□□□□□ -2.04
MSD1YPL104W SPG1P50088 95 aa2.33□□□□□ -2.04
MSD1YPL104W SHH4Q06236 168 aa2.33□□□□□ -2.04
MSD1YPL104W TDA8Q6B2U8 126 aa2.33□□□□□ -2.04
MSD1YPL104W YSY6P38374 65 aa2.32□□□□□ -2.04
MSD1YPL104W YBL112CQ3E7Y4 105 aa2.32□□□□□ -2.04
MSD1YPL104W YLR285C-AQ3E771 56 aa2.32□□□□□ -2.04
MSD1YPL104W RSM18P40033 138 aa2.31□□□□□ -2.04
MSD1YPL104W YNL184CP53876 108 aa2.31□□□□□ -2.04
MSD1YPL104W YOL014WQ08110 124 aa2.31□□□□□ -2.04
MSD1YPL104W ATP20Q12233 115 aa2.3□□□□□ -2.04
MSD1YPL104W COF1Q03048 143 aaKnown RBP2.3□□□□□ -2.04
MSD1YPL104W YLR162WQ06235 118 aa2.3□□□□□ -2.04
MSD1YPL104W YJL197C-AP0C5P0 93 aa2.29□□□□□ -2.04
MSD1YPL104W YGR039WP53225 103 aa2.29□□□□□ -2.04
MSD1YPL104W YDR119W-AQ2V2P9 66 aa2.29□□□□□ -2.04
MSD1YPL104W MIC10Q96VH5 97 aa2.29□□□□□ -2.04
MSD1YPL104W YEL045CP32616 141 aa2.29□□□□□ -2.04
MSD1YPL104W YBR027CP38220 110 aa2.29□□□□□ -2.04
MSD1YPL104W YOR268CQ08734 132 aa2.29□□□□□ -2.04
MSD1YPL104W RPS28BP0C0X0 67 aaKnown RBP2.28□□□□□ -2.04
MSD1YPL104W YCR050CP25630 102 aa2.28□□□□□ -2.04
MSD1YPL104W YHL018WP38744 120 aaPredicted RBP2.28□□□□□ -2.04
MSD1YPL104W RPS28AQ3E7X9 67 aaPredicted RBP2.28□□□□□ -2.04
MSD1YPL104W YPL038W-AQ3E7B4 63 aa2.27□□□□□ -2.05
MSD1YPL104W YLR157W-DP0CE99 70 aa2.27□□□□□ -2.05
MSD1YPL104W DDR48P18899 430 aaKnown RBP2.27□□□□□ -2.05
MSD1YPL104W YGL149WP53116 101 aa2.27□□□□□ -2.05
MSD1YPL104W YOR304C-AO14468 76 aa2.26□□□□□ -2.05
MSD1YPL104W YOL097W-AQ3E7Y9 61 aa2.25□□□□□ -2.05
MSD1YPL104W YOR314WQ12506 109 aa2.25□□□□□ -2.05
MSD1YPL104W YAR064WP39563 99 aa2.24□□□□□ -2.05
MSD1YPL104W MDN1Q12019 4910 aaKnown RBP2.24□□□□□ -2.05
MSD1YPL104W YFR032C-BQ8TGU2 87 aa2.23□□□□□ -2.05
MSD1YPL104W TOM6P33448 61 aa2.22□□□□□ -2.05
MSD1YPL104W YDR246W-AQ3E763 66 aa2.22□□□□□ -2.05
MSD1YPL104W RPL36AP05745 100 aaPredicted RBP2.21□□□□□ -2.05
MSD1YPL104W KSH1Q8TGJ3 72 aa2.21□□□□□ -2.05
MSD1YPL104W YIL102CP40488 101 aa2.21□□□□□ -2.06
MSD1YPL104W NOP10Q6Q547 58 aaPredicted RBP2.21□□□□□ -2.06
MSD1YPL104W AIM4P38305 123 aaPredicted RBP2.2□□□□□ -2.06
MSD1YPL104W YHR125WP38831 101 aa2.2□□□□□ -2.06
MSD1YPL104W YER187WP40102 141 aa2.2□□□□□ -2.06
MSD1YPL104W YHL005CP38752 130 aa2.19□□□□□ -2.06
MSD1YPL104W LIP1Q03579 150 aa2.19□□□□□ -2.06
MSD1YPL104W YPR153WQ06537 140 aa2.19□□□□□ -2.06
MSD1YPL104W YDR010CQ12426 110 aa2.19□□□□□ -2.06
MSD1YPL104W YDL012CQ12489 107 aa2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 10.3 ms