RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W ICY1Q04329 127 aa0.17□□□□□ -2.38
BRO1YPL084W BPH1P25356 2167 aa0.16□□□□□ -2.38
BRO1YPL084W UBC5P15732 148 aa0.16□□□□□ -2.38
BRO1YPL084W SNA2P56508 79 aa0.16□□□□□ -2.38
BRO1YPL084W YOR343CQ12484 108 aa0.16□□□□□ -2.38
BRO1YPL084W PAU6P0CE90 120 aa0.15□□□□□ -2.39
BRO1YPL084W PAU18P0CE91 120 aa0.15□□□□□ -2.39
BRO1YPL084W MRP17P28778 131 aa0.15□□□□□ -2.39
BRO1YPL084W YBR090CP38253 122 aa0.15□□□□□ -2.39
BRO1YPL084W YBR292CP38357 123 aa0.15□□□□□ -2.39
BRO1YPL084W YFR010W-AP0C5N0 62 aa0.14□□□□□ -2.39
BRO1YPL084W MIX14Q04341 121 aa0.14□□□□□ -2.39
BRO1YPL084W YER137CP40083 148 aaKnown RBP0.14□□□□□ -2.39
BRO1YPL084W YNR034W-AQ3E841 98 aa0.14□□□□□ -2.39
BRO1YPL084W YMR105W-AQ8TGS8 64 aa0.14□□□□□ -2.39
BRO1YPL084W PAU20Q08322 120 aa0.13□□□□□ -2.39
BRO1YPL084W RSM18P40033 138 aa0.12□□□□□ -2.39
BRO1YPL084W RSM19P53733 91 aaPredicted RBP0.12□□□□□ -2.39
BRO1YPL084W RPC10P40422 70 aa0.12□□□□□ -2.39
BRO1YPL084W YNL198CP40166 100 aa0.11□□□□□ -2.39
BRO1YPL084W YBL071CP38185 102 aa0.11□□□□□ -2.39
BRO1YPL084W KSH1Q8TGJ3 72 aa0.11□□□□□ -2.39
BRO1YPL084W AIM19P40502 157 aa0.1□□□□□ -2.39
BRO1YPL084W YHL005CP38752 130 aa0.09□□□□□ -2.39
BRO1YPL084W RGI1P40043 161 aaPredicted RBP0.09□□□□□ -2.39
BRO1YPL084W Q0017Q9ZZX8 53 aa0.09□□□□□ -2.39
BRO1YPL084W YHR214C-DP0CX93 97 aa0.09□□□□□ -2.4
BRO1YPL084W YBR016WP38216 128 aa0.09□□□□□ -2.4
BRO1YPL084W YOR289WQ12012 251 aaPredicted RBP0.09□□□□□ -2.4
BRO1YPL084W PAU1P0CE88 120 aa0.07□□□□□ -2.4
BRO1YPL084W PAU14P0CE89 120 aa0.07□□□□□ -2.4
BRO1YPL084W PAU8P0CE92 120 aa0.07□□□□□ -2.4
BRO1YPL084W PAU11P0CE93 120 aa0.07□□□□□ -2.4
BRO1YPL084W PAU13P38725 120 aa0.07□□□□□ -2.4
BRO1YPL084W PAU10Q03050 120 aa0.07□□□□□ -2.4
BRO1YPL084W PAU9Q3E770 120 aa0.07□□□□□ -2.4
BRO1YPL084W ATX1P38636 73 aa0.07□□□□□ -2.4
BRO1YPL084W HMRA1P0CY11 126 aa0.06□□□□□ -2.4
BRO1YPL084W SPC1P46965 94 aa0.06□□□□□ -2.4
BRO1YPL084W YFR009W-AP0C5M9 85 aa0.06□□□□□ -2.4
BRO1YPL084W NHP10Q03435 203 aa0.06□□□□□ -2.4
BRO1YPL084W HOR7Q05827 59 aa0.06□□□□□ -2.4
BRO1YPL084W RPS27AP35997 82 aaKnown RBP0.05□□□□□ -2.4
BRO1YPL084W RPS27BP38711 82 aa0.05□□□□□ -2.4
BRO1YPL084W EMC5P40540 141 aa0.05□□□□□ -2.4
BRO1YPL084W SGF11Q03067 99 aa0.05□□□□□ -2.4
BRO1YPL084W SIP18P50263 79 aa0.04□□□□□ -2.4
BRO1YPL084W YJR107C-AP0CT86 78 aa0.04□□□□□ -2.4
BRO1YPL084W PAU4P53427 120 aa0.04□□□□□ -2.4
BRO1YPL084W RRT15Q3E811 62 aa0.04□□□□□ -2.4
BRO1YPL084W RPL38P49167 78 aaKnown RBP0.03□□□□□ -2.41
BRO1YPL084W YNL042W-BQ3E7Z2 85 aa0.01□□□□□ -2.41
BRO1YPL084W COX7P10174 60 aa-0.01□□□□□ -2.41
BRO1YPL084W Q0032Q9ZZX7 96 aa-0.01□□□□□ -2.41
BRO1YPL084W FYV7Q12247 151 aa-0.01□□□□□ -2.41
BRO1YPL084W PDX3P38075 228 aaKnown RBP-0.02□□□□□ -2.41
BRO1YPL084W YPR010C-AA5Z2X5 72 aa-0.02□□□□□ -2.41
BRO1YPL084W SNU13P39990 126 aaKnown RBP-0.03□□□□□ -2.41
BRO1YPL084W YIL134C-AQ45U18 67 aa-0.03□□□□□ -2.41
BRO1YPL084W YBR201C-AQ2V2Q3 67 aa-0.03□□□□□ -2.41
BRO1YPL084W YDR034C-AP0C289 58 aa-0.04□□□□□ -2.42
BRO1YPL084W MSL1P40567 111 aaPredicted RBP-0.04□□□□□ -2.42
BRO1YPL084W YCR075W-AQ3E830 75 aa-0.04□□□□□ -2.42
BRO1YPL084W YLL066W-BQ8TGJ7 56 aa-0.04□□□□□ -2.42
BRO1YPL084W BSC4P53841 131 aa-0.05□□□□□ -2.42
BRO1YPL084W YDR042CQ03205 200 aa-0.06□□□□□ -2.42
BRO1YPL084W TOM6P33448 61 aa-0.08□□□□□ -2.42
BRO1YPL084W YDR029WQ12111 104 aa-0.08□□□□□ -2.42
BRO1YPL084W YMR122W-AQ3E842 84 aa-0.08□□□□□ -2.42
BRO1YPL084W SUS1Q6WNK7 96 aa-0.08□□□□□ -2.42
BRO1YPL084W YMR082CQ04276 118 aa-0.08□□□□□ -2.42
BRO1YPL084W YAL065CO13511 128 aa-0.1□□□□□ -2.42
BRO1YPL084W NCE101Q02820 53 aa-0.1□□□□□ -2.42
BRO1YPL084W NHP2P32495 156 aaPredicted RBP-0.1□□□□□ -2.43
BRO1YPL084W ZEO1Q08245 113 aa-0.11□□□□□ -2.43
BRO1YPL084W MHF2Q3E829 80 aa-0.12□□□□□ -2.43
BRO1YPL084W ATP18P81450 59 aa-0.12□□□□□ -2.43
BRO1YPL084W ERI1P62651 68 aaKnown RBP-0.13□□□□□ -2.43
BRO1YPL084W SDH6Q3E785 79 aa-0.13□□□□□ -2.43
BRO1YPL084W SCP1Q08873 200 aa-0.14□□□□□ -2.43
BRO1YPL084W YDR381C-AQ3E6R5 114 aa-0.14□□□□□ -2.43
BRO1YPL084W RPL39P04650 51 aa-0.15□□□□□ -2.43
BRO1YPL084W YML054C-AQ3E809 52 aa-0.15□□□□□ -2.43
BRO1YPL084W YCR108CQ3E819 63 aa-0.15□□□□□ -2.43
BRO1YPL084W FPR2P32472 135 aa-0.15□□□□□ -2.43
BRO1YPL084W YPL225WQ08971 146 aaKnown RBP-0.15□□□□□ -2.43
BRO1YPL084W YGR025WP53216 100 aa-0.16□□□□□ -2.43
BRO1YPL084W PAU23Q07987 124 aa-0.16□□□□□ -2.44
BRO1YPL084W PAU17Q12370 124 aa-0.16□□□□□ -2.44
BRO1YPL084W TOM7P53507 60 aa-0.17□□□□□ -2.44
BRO1YPL084W EDC1P53080 175 aaPredicted RBP-0.19□□□□□ -2.44
BRO1YPL084W ECM12O13529 151 aa-0.2□□□□□ -2.44
BRO1YPL084W YCR085WP25650 117 aa-0.2□□□□□ -2.44
BRO1YPL084W YKL068W-AQ3E826 78 aa-0.2□□□□□ -2.44
BRO1YPL084W YCL001W-BQ96VH2 84 aa-0.2□□□□□ -2.44
BRO1YPL084W YPR108W-AQ3E7B3 70 aa-0.21□□□□□ -2.44
BRO1YPL084W YMR175W-AQ3E766 64 aa-0.21□□□□□ -2.44
BRO1YPL084W NOP10Q6Q547 58 aaPredicted RBP-0.21□□□□□ -2.44
BRO1YPL084W YBR032WP38223 100 aa-0.22□□□□□ -2.44
BRO1YPL084W YOL097W-AQ3E7Y9 61 aa-0.23□□□□□ -2.45
Retrieved 100 of 5,963 RNA–protein pairs in 116.3 ms