RNA–Protein interactions for RNA: YPL010W

RET3, Transcript of Zeta subunit of the coatomer complex (COPI), yeastyeast

Gene RET3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RET3YPL010W YHR130CP38834 111 aa2.15□□□□□ -2.07
RET3YPL010W YNR077CP53758 84 aa2.14□□□□□ -2.07
RET3YPL010W YDL157CQ12082 118 aa2.14□□□□□ -2.07
RET3YPL010W Q0017Q9ZZX8 53 aa2.14□□□□□ -2.07
RET3YPL010W MRPL44P19956 98 aa2.13□□□□□ -2.07
RET3YPL010W YAR1P46683 200 aa2.13□□□□□ -2.07
RET3YPL010W YOL097W-AQ3E7Y9 61 aa2.13□□□□□ -2.07
RET3YPL010W NHP2P32495 156 aaPredicted RBP2.12□□□□□ -2.07
RET3YPL010W CWC27Q02770 301 aa2.12□□□□□ -2.07
RET3YPL010W FUN14P18411 198 aa2.11□□□□□ -2.07
RET3YPL010W RSM18P40033 138 aa2.11□□□□□ -2.07
RET3YPL010W SEC11P15367 167 aa2.1□□□□□ -2.07
RET3YPL010W MSL1P40567 111 aaPredicted RBP2.1□□□□□ -2.07
RET3YPL010W YOR034C-AQ3E735 80 aa2.1□□□□□ -2.07
RET3YPL010W COA6Q3E846 104 aa2.1□□□□□ -2.07
RET3YPL010W TDA8Q6B2U8 126 aa2.09□□□□□ -2.07
RET3YPL010W YGL230CP53074 147 aa2.08□□□□□ -2.08
RET3YPL010W CGR1P53188 120 aa2.08□□□□□ -2.08
RET3YPL010W MPC3P53311 146 aa2.08□□□□□ -2.08
RET3YPL010W CUE4Q04201 117 aaPredicted RBP2.08□□□□□ -2.08
RET3YPL010W TSC3Q3E790 80 aa2.08□□□□□ -2.08
RET3YPL010W RSM19P53733 91 aaPredicted RBP2.07□□□□□ -2.08
RET3YPL010W DSE2P38844 325 aa2.06□□□□□ -2.08
RET3YPL010W HUR1P45820 110 aa2.06□□□□□ -2.08
RET3YPL010W COF1Q03048 143 aaKnown RBP2.06□□□□□ -2.08
RET3YPL010W ELC1Q03071 99 aa2.06□□□□□ -2.08
RET3YPL010W SSS1P35179 80 aa2.05□□□□□ -2.08
RET3YPL010W YDR210WQ03482 75 aa2.05□□□□□ -2.08
RET3YPL010W YIL134C-AQ45U18 67 aa2.05□□□□□ -2.08
RET3YPL010W YJR128WP47162 119 aa2.04□□□□□ -2.08
RET3YPL010W YGL034CP53186 121 aa2.04□□□□□ -2.08
RET3YPL010W YLR162WQ06235 118 aa2.04□□□□□ -2.08
RET3YPL010W SHH4Q06236 168 aa2.04□□□□□ -2.08
RET3YPL010W RPS29AP41057 56 aaKnown RBP2.03□□□□□ -2.08
RET3YPL010W MIC10Q96VH5 97 aa2.03□□□□□ -2.08
RET3YPL010W YER181CP40097 107 aa2.02□□□□□ -2.09
RET3YPL010W NAT5Q08689 176 aa2.02□□□□□ -2.09
RET3YPL010W POP7P38291 140 aa2.01□□□□□ -2.09
RET3YPL010W YER187WP40102 141 aa2.01□□□□□ -2.09
RET3YPL010W YJL009WP47078 108 aa2.01□□□□□ -2.09
RET3YPL010W YHR213W-BQ8TGK1 99 aa2.01□□□□□ -2.09
RET3YPL010W YJR107C-AP0CT86 78 aa2□□□□□ -2.09
RET3YPL010W RPS29BP41058 56 aaKnown RBP2□□□□□ -2.09
RET3YPL010W ECM19Q06011 112 aa2□□□□□ -2.09
RET3YPL010W YLR361C-AQ3E795 98 aa2□□□□□ -2.09
RET3YPL010W SEN15Q04675 128 aa1.99□□□□□ -2.09
RET3YPL010W YJL133C-AQ3E7A3 74 aa1.99□□□□□ -2.09
RET3YPL010W PAI3P01094 68 aa1.98□□□□□ -2.09
RET3YPL010W YHR073W-AP0C5N7 58 aa1.98□□□□□ -2.09
RET3YPL010W ICS3P47034 131 aa1.98□□□□□ -2.09
RET3YPL010W LSM6Q06406 86 aaKnown RBP1.98□□□□□ -2.09
RET3YPL010W YOR304C-AO14468 76 aa1.97□□□□□ -2.09
RET3YPL010W ISD11Q6Q560 94 aa1.97□□□□□ -2.09
RET3YPL010W YFR009W-AP0C5M9 85 aa1.96□□□□□ -2.1
RET3YPL010W YGR164WP53291 111 aa1.96□□□□□ -2.1
RET3YPL010W ATP18P81450 59 aa1.96□□□□□ -2.1
RET3YPL010W EDC1P53080 175 aaPredicted RBP1.95□□□□□ -2.1
RET3YPL010W YLR296WQ05898 108 aa1.95□□□□□ -2.1
RET3YPL010W YLR363W-AQ3E747 85 aa1.95□□□□□ -2.1
RET3YPL010W COX23P38824 151 aa1.94□□□□□ -2.1
RET3YPL010W YPR153WQ06537 140 aa1.94□□□□□ -2.1
RET3YPL010W RPL36AP05745 100 aaPredicted RBP1.93□□□□□ -2.1
RET3YPL010W YML108WQ03759 105 aa1.93□□□□□ -2.1
RET3YPL010W TDA2P40045 126 aa1.92□□□□□ -2.1
RET3YPL010W YOR316C-AQ3E806 69 aa1.92□□□□□ -2.1
RET3YPL010W YHL042WP38729 150 aa1.91□□□□□ -2.1
RET3YPL010W YIL002W-AQ3E7Z5 69 aa1.91□□□□□ -2.1
RET3YPL010W YCR050CP25630 102 aa1.9□□□□□ -2.11
RET3YPL010W GLC8P41818 229 aa1.9□□□□□ -2.11
RET3YPL010W YML054C-AQ3E809 52 aa1.9□□□□□ -2.11
RET3YPL010W YAR064WP39563 99 aa1.89□□□□□ -2.11
RET3YPL010W SKI6P46948 246 aaPredicted RBP1.89□□□□□ -2.11
RET3YPL010W YJL144WP47009 104 aa1.89□□□□□ -2.11
RET3YPL010W SAE3P89114 91 aa1.89□□□□□ -2.11
RET3YPL010W YPL080CQ02826 108 aa1.89□□□□□ -2.11
RET3YPL010W YDR381C-AQ3E6R5 114 aa1.89□□□□□ -2.11
RET3YPL010W YDL085C-AQ3E7B7 68 aaKnown RBP1.89□□□□□ -2.11
RET3YPL010W YLR255CO13574 117 aa1.88□□□□□ -2.11
RET3YPL010W YBR016WP38216 128 aa1.88□□□□□ -2.11
RET3YPL010W RPL38P49167 78 aaKnown RBP1.88□□□□□ -2.11
RET3YPL010W YOL014WQ08110 124 aa1.88□□□□□ -2.11
RET3YPL010W YAL067W-AQ8TGK6 75 aa1.87□□□□□ -2.11
RET3YPL010W RAD6P06104 172 aa1.84□□□□□ -2.11
RET3YPL010W TIM11P81449 96 aaPredicted RBP1.84□□□□□ -2.11
RET3YPL010W ATP20Q12233 115 aa1.84□□□□□ -2.11
RET3YPL010W YIL102C-AQ2V2P5 75 aa1.84□□□□□ -2.11
RET3YPL010W LIP1Q03579 150 aa1.83□□□□□ -2.12
RET3YPL010W PBI2P0CT04 75 aaKnown RBP1.81□□□□□ -2.12
RET3YPL010W LSM8P47093 109 aaKnown RBP1.8□□□□□ -2.12
RET3YPL010W YBL008W-AQ3E821 79 aa1.8□□□□□ -2.12
RET3YPL010W COX8P04039 78 aa1.78□□□□□ -2.12
RET3YPL010W YGR039WP53225 103 aa1.78□□□□□ -2.12
RET3YPL010W YIL156W-BQ2V2P4 73 aa1.78□□□□□ -2.12
RET3YPL010W RPA12P32529 125 aaKnown RBP1.76□□□□□ -2.13
RET3YPL010W YGR146C-AQ8TGT9 53 aa1.76□□□□□ -2.13
RET3YPL010W YBL044WP38194 122 aa1.75□□□□□ -2.13
RET3YPL010W YNL198CP40166 100 aa1.75□□□□□ -2.13
RET3YPL010W RPL37AP49166 88 aaKnown RBP1.74□□□□□ -2.13
RET3YPL010W RPS30AP0CX33 63 aaKnown RBP1.73□□□□□ -2.13
RET3YPL010W RPS30BP0CX34 63 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 53.8 ms