RNA–Protein interactions for RNA: YOR227W

HER1, Transcript of Protein of unknown function, yeastyeast

Gene HER1, Length 3,741 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HER1YOR227W COA3Q3E7B2 85 aa1.19□□□□□ -2.22
HER1YOR227W LSM6Q06406 86 aaKnown RBP1.18□□□□□ -2.22
HER1YOR227W YMR175W-AQ3E766 64 aa1.18□□□□□ -2.22
HER1YOR227W VPS55P47111 140 aa1.18□□□□□ -2.22
HER1YOR227W CCW12Q12127 133 aa1.18□□□□□ -2.22
HER1YOR227W RPL33AP05744 107 aaKnown RBP1.18□□□□□ -2.22
HER1YOR227W YBR013CP38215 129 aa1.18□□□□□ -2.22
HER1YOR227W RSM18P40033 138 aa1.18□□□□□ -2.22
HER1YOR227W YHR007C-AQ07074 71 aa1.18□□□□□ -2.22
HER1YOR227W YCR095W-AQ3E787 52 aa1.18□□□□□ -2.22
HER1YOR227W AQY2P0CD90 149 aa1.17□□□□□ -2.22
HER1YOR227W NRG2P38082 220 aa1.17□□□□□ -2.22
HER1YOR227W YMR122CQ03879 124 aa1.17□□□□□ -2.22
HER1YOR227W PAU8P0CE92 120 aa1.17□□□□□ -2.22
HER1YOR227W PAU11P0CE93 120 aa1.17□□□□□ -2.22
HER1YOR227W MRPL38P35996 138 aaPredicted RBP1.17□□□□□ -2.22
HER1YOR227W PAU13P38725 120 aa1.17□□□□□ -2.22
HER1YOR227W POR2P40478 281 aa1.17□□□□□ -2.22
HER1YOR227W PAU4P53427 120 aa1.17□□□□□ -2.22
HER1YOR227W MRPS12P53732 153 aa1.17□□□□□ -2.22
HER1YOR227W PAU10Q03050 120 aa1.17□□□□□ -2.22
HER1YOR227W PAU9Q3E770 120 aa1.17□□□□□ -2.22
HER1YOR227W MPC2P38857 129 aa1.16□□□□□ -2.22
HER1YOR227W COX19Q3E731 98 aa1.16□□□□□ -2.22
HER1YOR227W YGL258W-AQ3E740 77 aa1.16□□□□□ -2.22
HER1YOR227W YOR192C-CQ3E736 78 aa1.16□□□□□ -2.22
HER1YOR227W YHR086W-AQ3E746 53 aa1.16□□□□□ -2.22
HER1YOR227W YGR035W-AQ45U48 73 aa1.16□□□□□ -2.22
HER1YOR227W YBL071CP38185 102 aa1.16□□□□□ -2.22
HER1YOR227W VMA9Q3E7B6 73 aa1.16□□□□□ -2.22
HER1YOR227W COA2Q3E823 68 aa1.15□□□□□ -2.22
HER1YOR227W YHR212W-AP0CX91 67 aa1.15□□□□□ -2.23
HER1YOR227W YNL146C-AQ3E7Z1 64 aa1.15□□□□□ -2.23
HER1YOR227W YLL066W-BQ8TGJ7 56 aa1.15□□□□□ -2.23
HER1YOR227W YLR255CO13574 117 aa1.15□□□□□ -2.23
HER1YOR227W LCL2Q08045 131 aa1.14□□□□□ -2.23
HER1YOR227W MIC27P50945 234 aa1.14□□□□□ -2.23
HER1YOR227W YNR034W-AQ3E841 98 aa1.14□□□□□ -2.23
HER1YOR227W PAU20Q08322 120 aa1.14□□□□□ -2.23
HER1YOR227W PRM7Q12459 698 aa1.14□□□□□ -2.23
HER1YOR227W YDR119W-AQ2V2P9 66 aa1.14□□□□□ -2.23
HER1YOR227W PAI3P01094 68 aa1.13□□□□□ -2.23
HER1YOR227W PAU1P0CE88 120 aa1.13□□□□□ -2.23
HER1YOR227W PAU14P0CE89 120 aa1.13□□□□□ -2.23
HER1YOR227W YHL005CP38752 130 aa1.13□□□□□ -2.23
HER1YOR227W HUG1Q6Q5K6 68 aa1.13□□□□□ -2.23
HER1YOR227W SNA2P56508 79 aa1.13□□□□□ -2.23
HER1YOR227W YHR173CP38864 112 aa1.13□□□□□ -2.23
HER1YOR227W GIS2P53849 153 aaKnown RBP RIP-Chip data1.12□□□□□ -2.23not detected
HER1YOR227W YIL156W-BQ2V2P4 73 aa1.12□□□□□ -2.23
HER1YOR227W YBR292CP38357 123 aa1.12□□□□□ -2.23
HER1YOR227W MGR2Q02889 113 aa1.12□□□□□ -2.23
HER1YOR227W PFY1P07274 126 aa1.11□□□□□ -2.23
HER1YOR227W LCL1Q02786 101 aa1.11□□□□□ -2.23
HER1YOR227W YDR210WQ03482 75 aa1.11□□□□□ -2.23
HER1YOR227W YDR381C-AQ3E6R5 114 aa1.11□□□□□ -2.23
HER1YOR227W YDR010CQ12426 110 aa1.11□□□□□ -2.23
HER1YOR227W TOM6P33448 61 aa1.1□□□□□ -2.23
HER1YOR227W SSS1P35179 80 aa1.1□□□□□ -2.23
HER1YOR227W ATX1P38636 73 aa1.1□□□□□ -2.23
HER1YOR227W IRC21Q04772 201 aa1.1□□□□□ -2.23
HER1YOR227W RPS11AP0CX47 156 aaKnown RBP1.1□□□□□ -2.23
HER1YOR227W RPS11BP0CX48 156 aaKnown RBP1.1□□□□□ -2.23
HER1YOR227W YPL038W-AQ3E7B4 63 aa1.1□□□□□ -2.23
HER1YOR227W TOS6P48560 102 aa1.09□□□□□ -2.23
HER1YOR227W YDR182W-AQ3E796 67 aa1.09□□□□□ -2.23
HER1YOR227W MRX7P53869 86 aa1.09□□□□□ -2.24
HER1YOR227W YDR246W-AQ3E763 66 aa1.09□□□□□ -2.24
HER1YOR227W YLR307C-AQ3E825 87 aa1.09□□□□□ -2.24
HER1YOR227W YOR105WQ08504 108 aa1.08□□□□□ -2.24
HER1YOR227W YER188C-AP0C0V2 99 aa1.08□□□□□ -2.24
HER1YOR227W YGR025WP53216 100 aa1.08□□□□□ -2.24
HER1YOR227W YGL041C-BQ3E750 60 aa1.07□□□□□ -2.24
HER1YOR227W YGR240C-AQ3E786 66 aa1.07□□□□□ -2.24
HER1YOR227W NOP10Q6Q547 58 aaPredicted RBP1.07□□□□□ -2.24
HER1YOR227W YOL013W-AP0C272 63 aaPredicted RBP1.07□□□□□ -2.24
HER1YOR227W YNL198CP40166 100 aa1.07□□□□□ -2.24
HER1YOR227W YLR342W-AQ3E810 57 aa1.07□□□□□ -2.24
HER1YOR227W YIL134C-AQ45U18 67 aa1.07□□□□□ -2.24
HER1YOR227W YAL065CO13511 128 aa1.06□□□□□ -2.24
HER1YOR227W BSC4P53841 131 aa1.06□□□□□ -2.24
HER1YOR227W MRPL31P14063 131 aaPredicted RBP1.05□□□□□ -2.24
HER1YOR227W YGR121W-AQ3E816 71 aa1.05□□□□□ -2.24
HER1YOR227W YDL022C-AP0C5L6 82 aa1.05□□□□□ -2.24
HER1YOR227W MVB12P42939 101 aa1.05□□□□□ -2.24
HER1YOR227W QCR9P22289 66 aa1.04□□□□□ -2.24
HER1YOR227W YOR034C-AQ3E735 80 aa1.04□□□□□ -2.24
HER1YOR227W YBR200W-AQ3E755 54 aa1.04□□□□□ -2.24
HER1YOR227W YOR314WQ12506 109 aa1.04□□□□□ -2.24
HER1YOR227W YNL190WP53872 204 aa1.03□□□□□ -2.24
HER1YOR227W YNL122CP53921 115 aaPredicted RBP1.03□□□□□ -2.24
HER1YOR227W ERI1P62651 68 aaKnown RBP1.03□□□□□ -2.24
HER1YOR227W YFL041W-AQ3E817 63 aa1.03□□□□□ -2.24
HER1YOR227W YCR001WP25347 104 aa1.03□□□□□ -2.24
HER1YOR227W SHU1P38751 150 aa1.03□□□□□ -2.25
HER1YOR227W YIL102C-AQ2V2P5 75 aa1.03□□□□□ -2.25
HER1YOR227W YBR201C-AQ2V2Q3 67 aa1.03□□□□□ -2.25
HER1YOR227W YMR122W-AQ3E842 84 aa1.02□□□□□ -2.25
HER1YOR227W RPL29P05747 59 aaPredicted RBP1.02□□□□□ -2.25
HER1YOR227W HHY1P39982 102 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 1042.9 ms