RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP1YOR098C PRP8P33334 2413 aaKnown RBP3.62□□□□□ -1.83
NUP1YOR098C GCN1P33892 2672 aaKnown RBP3.62□□□□□ -1.83
NUP1YOR098C SVP26P38869 228 aa3.62□□□□□ -1.83
NUP1YOR098C CMC4Q3E7A9 73 aa3.62□□□□□ -1.83
NUP1YOR098C DCV1P43595 202 aa3.61□□□□□ -1.83
NUP1YOR098C YER187WP40102 141 aa3.6□□□□□ -1.83
NUP1YOR098C YOR032W-AQ8TGS1 66 aa3.59□□□□□ -1.83
NUP1YOR098C YOR034C-AQ3E735 80 aa3.59□□□□□ -1.83
NUP1YOR098C YMR175W-AQ3E766 64 aa3.59□□□□□ -1.84
NUP1YOR098C YGL149WP53116 101 aa3.58□□□□□ -1.84
NUP1YOR098C MRPL38P35996 138 aaPredicted RBP3.58□□□□□ -1.84
NUP1YOR098C HUR1P45820 110 aa3.57□□□□□ -1.84
NUP1YOR098C YJL144WP47009 104 aa3.57□□□□□ -1.84
NUP1YOR098C YHR022CP38763 256 aa3.57□□□□□ -1.84
NUP1YOR098C CCW14O13547 238 aa3.56□□□□□ -1.84
NUP1YOR098C MPC2P38857 129 aa3.56□□□□□ -1.84
NUP1YOR098C YEL014CP39999 101 aa3.56□□□□□ -1.84
NUP1YOR098C YSY6P38374 65 aa3.55□□□□□ -1.84
NUP1YOR098C EMC6Q12431 108 aa3.55□□□□□ -1.84
NUP1YOR098C YBR200W-AQ3E755 54 aa3.55□□□□□ -1.84
NUP1YOR098C MEC1P38111 2368 aa3.55□□□□□ -1.84
NUP1YOR098C URA2P07259 2214 aaKnown RBP3.54□□□□□ -1.84
NUP1YOR098C RTC6O14464 93 aa3.54□□□□□ -1.84
NUP1YOR098C SHU1P38751 150 aa3.54□□□□□ -1.84
NUP1YOR098C SED1Q01589 338 aa3.53□□□□□ -1.84
NUP1YOR098C YLR285C-AQ3E771 56 aa3.53□□□□□ -1.84
NUP1YOR098C POR2P40478 281 aa3.53□□□□□ -1.84
NUP1YOR098C EDC1P53080 175 aaPredicted RBP3.53□□□□□ -1.84
NUP1YOR098C YDR246W-AQ3E763 66 aa3.53□□□□□ -1.84
NUP1YOR098C OST5Q92316 86 aa3.53□□□□□ -1.84
NUP1YOR098C YEL008WP40001 126 aa3.52□□□□□ -1.85
NUP1YOR098C RRT15Q3E811 62 aa3.52□□□□□ -1.85
NUP1YOR098C YCL048W-AQ2V2Q2 79 aa3.51□□□□□ -1.85
NUP1YOR098C RSM19P53733 91 aaPredicted RBP3.51□□□□□ -1.85
NUP1YOR098C RGM1Q00453 211 aa3.51□□□□□ -1.85
NUP1YOR098C YOR011W-AQ3E807 68 aa3.5□□□□□ -1.85
NUP1YOR098C IRC21Q04772 201 aa3.49□□□□□ -1.85
NUP1YOR098C QCR8P08525 94 aa3.49□□□□□ -1.85
NUP1YOR098C YIR020CP40575 100 aa3.49□□□□□ -1.85
NUP1YOR098C YJL197C-AP0C5P0 93 aa3.48□□□□□ -1.85
NUP1YOR098C YJR107C-AP0CT86 78 aa3.48□□□□□ -1.85
NUP1YOR098C CUP1-1P0CX80 61 aa3.47□□□□□ -1.85
NUP1YOR098C CUP1-2P0CX81 61 aa3.47□□□□□ -1.85
NUP1YOR098C ERI1P62651 68 aaKnown RBP3.47□□□□□ -1.85
NUP1YOR098C CCW12Q12127 133 aa3.47□□□□□ -1.85
NUP1YOR098C YHR007C-AQ07074 71 aa3.46□□□□□ -1.86
NUP1YOR098C AIM4P38305 123 aaPredicted RBP3.46□□□□□ -1.86
NUP1YOR098C YBR219CP38317 127 aa3.45□□□□□ -1.86
NUP1YOR098C YHL037CP38733 133 aa3.45□□□□□ -1.86
NUP1YOR098C RPL38P49167 78 aaKnown RBP3.45□□□□□ -1.86
NUP1YOR098C YBR056W-AI2HB52 66 aa3.44□□□□□ -1.86
NUP1YOR098C COX23P38824 151 aa3.44□□□□□ -1.86
NUP1YOR098C YLL006W-AQ3E814 58 aa3.44□□□□□ -1.86
NUP1YOR098C RPL36BO14455 100 aaKnown RBP3.43□□□□□ -1.86
NUP1YOR098C RPL36AP05745 100 aaPredicted RBP3.43□□□□□ -1.86
NUP1YOR098C YAL065CO13511 128 aa3.43□□□□□ -1.86
NUP1YOR098C YNL146C-AQ3E7Z1 64 aa3.43□□□□□ -1.86
NUP1YOR098C NOP10Q6Q547 58 aaPredicted RBP3.43□□□□□ -1.86
NUP1YOR098C ATP18P81450 59 aa3.42□□□□□ -1.86
NUP1YOR098C ICY1Q04329 127 aa3.42□□□□□ -1.86
NUP1YOR098C YFR009W-AP0C5M9 85 aa3.41□□□□□ -1.86
NUP1YOR098C VAM10Q08474 114 aa3.41□□□□□ -1.86
NUP1YOR098C RSM18P40033 138 aa3.41□□□□□ -1.86
NUP1YOR098C YDR182W-AQ3E796 67 aa3.41□□□□□ -1.86
NUP1YOR098C TAR1Q8TGM6 124 aa3.4□□□□□ -1.86
NUP1YOR098C YBR027CP38220 110 aa3.4□□□□□ -1.87
NUP1YOR098C YLR162WQ06235 118 aa3.39□□□□□ -1.87
NUP1YOR098C PMP3P87284 55 aa3.38□□□□□ -1.87
NUP1YOR098C ICS3P47034 131 aa3.38□□□□□ -1.87
NUP1YOR098C YGL014C-AP0C5N1 53 aa3.37□□□□□ -1.87
NUP1YOR098C YGR121W-AQ3E816 71 aa3.37□□□□□ -1.87
NUP1YOR098C YOR314WQ12506 109 aa3.37□□□□□ -1.87
NUP1YOR098C YOL166W-AQ8TGJ1 51 aa3.37□□□□□ -1.87
NUP1YOR098C RPS11AP0CX47 156 aaKnown RBP3.36□□□□□ -1.87
NUP1YOR098C RPS11BP0CX48 156 aaKnown RBP3.36□□□□□ -1.87
NUP1YOR098C UTP20P35194 2493 aaKnown RBP3.36□□□□□ -1.87
NUP1YOR098C YHL005CP38752 130 aa3.35□□□□□ -1.87
NUP1YOR098C YMR122W-AQ3E842 84 aa3.35□□□□□ -1.87
NUP1YOR098C YKL065W-AQ2V2P2 73 aa3.34□□□□□ -1.87
NUP1YOR098C RPS30AP0CX33 63 aaKnown RBP3.34□□□□□ -1.88
NUP1YOR098C RPS30BP0CX34 63 aaKnown RBP3.34□□□□□ -1.88
NUP1YOR098C YGR035W-AQ45U48 73 aa3.32□□□□□ -1.88
NUP1YOR098C HOR7Q05827 59 aa3.32□□□□□ -1.88
NUP1YOR098C RPL33AP05744 107 aaKnown RBP3.31□□□□□ -1.88
NUP1YOR098C YMR122CQ03879 124 aa3.31□□□□□ -1.88
NUP1YOR098C YDL012CQ12489 107 aa3.31□□□□□ -1.88
NUP1YOR098C MVB12P42939 101 aa3.31□□□□□ -1.88
NUP1YOR098C YIL102CP40488 101 aa3.3□□□□□ -1.88
NUP1YOR098C RPL29P05747 59 aaPredicted RBP3.29□□□□□ -1.88
NUP1YOR098C YPR010C-AA5Z2X5 72 aa3.29□□□□□ -1.88
NUP1YOR098C YHR213W-BQ8TGK1 99 aa3.29□□□□□ -1.88
NUP1YOR098C YER188C-AP0C0V2 99 aa3.27□□□□□ -1.89
NUP1YOR098C YCR001WP25347 104 aa3.27□□□□□ -1.89
NUP1YOR098C YCL042WP25572 119 aa3.27□□□□□ -1.89
NUP1YOR098C YDR010CQ12426 110 aa3.27□□□□□ -1.89
NUP1YOR098C YHR086W-AQ3E746 53 aa3.27□□□□□ -1.89
NUP1YOR098C SPC1P46965 94 aa3.26□□□□□ -1.89
NUP1YOR098C YBR230W-AQ3E762 66 aa3.26□□□□□ -1.89
NUP1YOR098C YJL127C-BQ3E828 52 aa3.26□□□□□ -1.89
NUP1YOR098C YJL133C-AQ3E7A3 74 aa3.26□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms