RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W PAU13P38725 120 aa1.79□□□□□ -2.12
MSH2YOL090W PAU4P53427 120 aa1.79□□□□□ -2.12
MSH2YOL090W PAU10Q03050 120 aa1.79□□□□□ -2.12
MSH2YOL090W YDR381C-AQ3E6R5 114 aa1.79□□□□□ -2.12
MSH2YOL090W PAU9Q3E770 120 aa1.79□□□□□ -2.12
MSH2YOL090W YNR034W-AQ3E841 98 aa1.79□□□□□ -2.12
MSH2YOL090W YLR255CO13574 117 aa1.79□□□□□ -2.12
MSH2YOL090W YHR214C-DP0CX93 97 aa1.79□□□□□ -2.12
MSH2YOL090W IRC21Q04772 201 aa1.79□□□□□ -2.12
MSH2YOL090W Q0297Q9ZZV8 51 aa1.79□□□□□ -2.12
MSH2YOL090W CCW14O13547 238 aa1.78□□□□□ -2.12
MSH2YOL090W YGL041C-BQ3E750 60 aa1.78□□□□□ -2.12
MSH2YOL090W MRX7P53869 86 aa1.77□□□□□ -2.13
MSH2YOL090W YBR292CP38357 123 aa1.77□□□□□ -2.13
MSH2YOL090W YGR240C-AQ3E786 66 aa1.77□□□□□ -2.13
MSH2YOL090W YHR212W-AP0CX91 67 aa1.77□□□□□ -2.13
MSH2YOL090W YPL038W-AQ3E7B4 63 aa1.76□□□□□ -2.13
MSH2YOL090W YOR343CQ12484 108 aa1.76□□□□□ -2.13
MSH2YOL090W TIM12P32830 109 aa1.75□□□□□ -2.13
MSH2YOL090W MPC2P38857 129 aa1.75□□□□□ -2.13
MSH2YOL090W ATX1P38636 73 aa1.74□□□□□ -2.13
MSH2YOL090W LCL1Q02786 101 aa1.74□□□□□ -2.13
MSH2YOL090W PAU1P0CE88 120 aa1.74□□□□□ -2.13
MSH2YOL090W PAU14P0CE89 120 aa1.74□□□□□ -2.13
MSH2YOL090W YIL156W-BQ2V2P4 73 aa1.74□□□□□ -2.13
MSH2YOL090W BPH1P25356 2167 aa1.74□□□□□ -2.13
MSH2YOL090W MDN1Q12019 4910 aaKnown RBP1.74□□□□□ -2.13
MSH2YOL090W YER188C-AP0C0V2 99 aa1.73□□□□□ -2.13
MSH2YOL090W YOL131WQ08270 108 aa1.73□□□□□ -2.13
MSH2YOL090W PAU20Q08322 120 aa1.73□□□□□ -2.13
MSH2YOL090W YDR010CQ12426 110 aa1.73□□□□□ -2.13
MSH2YOL090W YNL122CP53921 115 aaPredicted RBP1.73□□□□□ -2.13
MSH2YOL090W SSS1P35179 80 aa1.73□□□□□ -2.13
MSH2YOL090W YHR173CP38864 112 aa1.73□□□□□ -2.13
MSH2YOL090W BSC4P53841 131 aa1.73□□□□□ -2.13
MSH2YOL090W PAU23Q07987 124 aa1.73□□□□□ -2.13
MSH2YOL090W PAU17Q12370 124 aa1.73□□□□□ -2.13
MSH2YOL090W RPS11AP0CX47 156 aaKnown RBP1.72□□□□□ -2.13
MSH2YOL090W RPS11BP0CX48 156 aaKnown RBP1.72□□□□□ -2.13
MSH2YOL090W SWM2P40342 146 aa1.72□□□□□ -2.13
MSH2YOL090W YOR105WQ08504 108 aa1.72□□□□□ -2.13
MSH2YOL090W YOL013W-AP0C272 63 aaPredicted RBP1.71□□□□□ -2.14
MSH2YOL090W RPS27AP35997 82 aaKnown RBP1.71□□□□□ -2.14
MSH2YOL090W RPS27BP38711 82 aa1.71□□□□□ -2.14
MSH2YOL090W YOR314WQ12506 109 aa1.71□□□□□ -2.14
MSH2YOL090W SMX2P40204 77 aaKnown RBP1.7□□□□□ -2.14
MSH2YOL090W COX12Q01519 83 aa1.7□□□□□ -2.14
MSH2YOL090W YGR121W-AQ3E816 71 aa1.7□□□□□ -2.14
MSH2YOL090W TRA1P38811 3744 aa1.7□□□□□ -2.14
MSH2YOL090W NOP10Q6Q547 58 aaPredicted RBP1.7□□□□□ -2.14
MSH2YOL090W MRPL31P14063 131 aaPredicted RBP1.69□□□□□ -2.14
MSH2YOL090W YJL009WP47078 108 aa1.69□□□□□ -2.14
MSH2YOL090W YNL198CP40166 100 aa1.69□□□□□ -2.14
MSH2YOL090W AIM19P40502 157 aa1.69□□□□□ -2.14
MSH2YOL090W YFL041W-AQ3E817 63 aa1.69□□□□□ -2.14
MSH2YOL090W YAL065CO13511 128 aa1.68□□□□□ -2.14
MSH2YOL090W FPR2P32472 135 aa1.68□□□□□ -2.14
MSH2YOL090W YCR001WP25347 104 aa1.68□□□□□ -2.14
MSH2YOL090W COX19Q3E731 98 aa1.68□□□□□ -2.14
MSH2YOL090W YGR035W-AQ45U48 73 aa1.68□□□□□ -2.14
MSH2YOL090W HUG1Q6Q5K6 68 aa1.68□□□□□ -2.14
MSH2YOL090W YBR032WP38223 100 aa1.67□□□□□ -2.14
MSH2YOL090W MVB12P42939 101 aa1.66□□□□□ -2.14
MSH2YOL090W YKL065W-AQ2V2P2 73 aa1.66□□□□□ -2.14
MSH2YOL090W BLM10P43583 2143 aa1.66□□□□□ -2.14
MSH2YOL090W QCR9P22289 66 aa1.65□□□□□ -2.14
MSH2YOL090W SHU1P38751 150 aa1.65□□□□□ -2.14
MSH2YOL090W MGR2Q02889 113 aa1.65□□□□□ -2.14
MSH2YOL090W YKL018C-AQ3E7A7 99 aa1.65□□□□□ -2.14
MSH2YOL090W YDL022C-AP0C5L6 82 aa1.65□□□□□ -2.15
MSH2YOL090W YAR064WP39563 99 aa1.65□□□□□ -2.15
MSH2YOL090W YIL134C-AQ45U18 67 aa1.65□□□□□ -2.15
MSH2YOL090W NCE101Q02820 53 aa1.64□□□□□ -2.15
MSH2YOL090W URA2P07259 2214 aaKnown RBP1.64□□□□□ -2.15
MSH2YOL090W YMR122W-AQ3E842 84 aa1.63□□□□□ -2.15
MSH2YOL090W ERI1P62651 68 aaKnown RBP1.63□□□□□ -2.15
MSH2YOL090W YBR201C-AQ2V2Q3 67 aa1.62□□□□□ -2.15
MSH2YOL090W YOR072WQ08486 104 aa1.61□□□□□ -2.15
MSH2YOL090W YNL042W-BQ3E7Z2 85 aa1.61□□□□□ -2.15
MSH2YOL090W YJR128WP47162 119 aa1.61□□□□□ -2.15
MSH2YOL090W YMR007WQ03675 126 aa1.61□□□□□ -2.15
MSH2YOL090W VMA9Q3E7B6 73 aa1.6□□□□□ -2.15
MSH2YOL090W Q0032Q9ZZX7 96 aa1.6□□□□□ -2.15
MSH2YOL090W HHY1P39982 102 aa1.6□□□□□ -2.15
MSH2YOL090W YDR246W-AQ3E763 66 aa1.59□□□□□ -2.16
MSH2YOL090W YOR034C-AQ3E735 80 aa1.58□□□□□ -2.16
MSH2YOL090W SIP18P50263 79 aa1.57□□□□□ -2.16
MSH2YOL090W YIL102C-AQ2V2P5 75 aa1.57□□□□□ -2.16
MSH2YOL090W YNL190WP53872 204 aa1.56□□□□□ -2.16
MSH2YOL090W SPI1P40092 148 aa1.56□□□□□ -2.16
MSH2YOL090W SGF11Q03067 99 aa1.56□□□□□ -2.16
MSH2YOL090W YSY6P38374 65 aa1.55□□□□□ -2.16
MSH2YOL090W YIL102CP40488 101 aa1.55□□□□□ -2.16
MSH2YOL090W AUA1P32450 94 aa1.54□□□□□ -2.16
MSH2YOL090W PAU7P39545 55 aa1.54□□□□□ -2.16
MSH2YOL090W HUA1P40325 198 aa1.54□□□□□ -2.16
MSH2YOL090W ATP18P81450 59 aa1.54□□□□□ -2.16
MSH2YOL090W RPL39P04650 51 aa1.52□□□□□ -2.17
MSH2YOL090W YMR141CP40211 102 aa1.52□□□□□ -2.17
MSH2YOL090W RPC10P40422 70 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms