RNA–Protein interactions for RNA: YNR015W

SMM1, Transcript of Dihydrouridine synthase, yeastyeast

Gene SMM1, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMM1YNR015W YHR007C-AQ07074 71 aa5.8□□□□□ -1.48
SMM1YNR015W YIL102C-AQ2V2P5 75 aa5.8□□□□□ -1.48
SMM1YNR015W KRE1P17260 313 aa5.78□□□□□ -1.48
SMM1YNR015W BET1P22804 142 aa5.78□□□□□ -1.48
SMM1YNR015W SFT1P43682 97 aa5.77□□□□□ -1.49
SMM1YNR015W YPR170W-BP0C5R9 85 aa5.76□□□□□ -1.49
SMM1YNR015W YOR072WQ08486 104 aa5.76□□□□□ -1.49
SMM1YNR015W RPL36BO14455 100 aaKnown RBP5.74□□□□□ -1.49
SMM1YNR015W YNL198CP40166 100 aa5.74□□□□□ -1.49
SMM1YNR015W YMR230W-AQ3E7B5 62 aa5.74□□□□□ -1.49
SMM1YNR015W LSO2Q3E772 92 aaKnown RBP5.73□□□□□ -1.49
SMM1YNR015W KTI11Q3E840 82 aa5.72□□□□□ -1.49
SMM1YNR015W YHR139C-AO13536 103 aa5.7□□□□□ -1.5
SMM1YNR015W YBR027CP38220 110 aa5.7□□□□□ -1.5
SMM1YNR015W OST2P46964 130 aa5.7□□□□□ -1.5
SMM1YNR015W YJL197C-AP0C5P0 93 aa5.68□□□□□ -1.5
SMM1YNR015W YJR107C-AP0CT86 78 aa5.68□□□□□ -1.5
SMM1YNR015W KSH1Q8TGJ3 72 aa5.68□□□□□ -1.5
SMM1YNR015W HOT13P36078 116 aa5.66□□□□□ -1.5
SMM1YNR015W DSE2P38844 325 aa5.66□□□□□ -1.5
SMM1YNR015W UIP3P39547 235 aa5.66□□□□□ -1.5
SMM1YNR015W RSM18P40033 138 aa5.65□□□□□ -1.5
SMM1YNR015W YNL184CP53876 108 aa5.65□□□□□ -1.5
SMM1YNR015W TSC3Q3E790 80 aa5.65□□□□□ -1.5
SMM1YNR015W YAR1P46683 200 aa5.63□□□□□ -1.51
SMM1YNR015W TDA8Q6B2U8 126 aa5.63□□□□□ -1.51
SMM1YNR015W YFR009W-AP0C5M9 85 aa5.61□□□□□ -1.51
SMM1YNR015W ATP18P81450 59 aa5.61□□□□□ -1.51
SMM1YNR015W YBR182C-AQ8TGU6 64 aa5.6□□□□□ -1.51
SMM1YNR015W RSM19P53733 91 aaPredicted RBP5.56□□□□□ -1.52
SMM1YNR015W YHR213W-BQ8TGK1 99 aa5.56□□□□□ -1.52
SMM1YNR015W TMA7Q3E764 64 aaKnown RBP5.55□□□□□ -1.52
SMM1YNR015W CMC4Q3E7A9 73 aa5.55□□□□□ -1.52
SMM1YNR015W ICS3P47034 131 aa5.54□□□□□ -1.52
SMM1YNR015W YDR381C-AQ3E6R5 114 aa5.53□□□□□ -1.52
SMM1YNR015W YHL005CP38752 130 aa5.52□□□□□ -1.53
SMM1YNR015W YLR162WQ06235 118 aa5.52□□□□□ -1.53
SMM1YNR015W YHL018WP38744 120 aaPredicted RBP5.51□□□□□ -1.53
SMM1YNR015W YJL133C-AQ3E7A3 74 aa5.51□□□□□ -1.53
SMM1YNR015W MIC10Q96VH5 97 aa5.51□□□□□ -1.53
SMM1YNR015W YLR157W-DP0CE99 70 aa5.5□□□□□ -1.53
SMM1YNR015W ECM19Q06011 112 aa5.5□□□□□ -1.53
SMM1YNR015W SHH4Q06236 168 aa5.5□□□□□ -1.53
SMM1YNR015W YOL097W-AQ3E7Y9 61 aa5.5□□□□□ -1.53
SMM1YNR015W RPA12P32529 125 aaKnown RBP5.49□□□□□ -1.53
SMM1YNR015W YAL063C-AQ3E791 96 aa5.49□□□□□ -1.53
SMM1YNR015W PBI2P0CT04 75 aaKnown RBP5.48□□□□□ -1.53
SMM1YNR015W YEL045CP32616 141 aa5.48□□□□□ -1.53
SMM1YNR015W COX23P38824 151 aa5.47□□□□□ -1.53
SMM1YNR015W EDC1P53080 175 aaPredicted RBP5.47□□□□□ -1.53
SMM1YNR015W ISD11Q6Q560 94 aa5.44□□□□□ -1.54
SMM1YNR015W YOL014WQ08110 124 aa5.43□□□□□ -1.54
SMM1YNR015W RPL38P49167 78 aaKnown RBP5.41□□□□□ -1.54
SMM1YNR015W COX7P10174 60 aa5.39□□□□□ -1.55
SMM1YNR015W YCR085WP25650 117 aa5.39□□□□□ -1.55
SMM1YNR015W TDA2P40045 126 aa5.39□□□□□ -1.55
SMM1YNR015W YCR043CP25361 127 aa5.38□□□□□ -1.55
SMM1YNR015W YNL122CP53921 115 aaPredicted RBP5.38□□□□□ -1.55
SMM1YNR015W COF1Q03048 143 aaKnown RBP5.38□□□□□ -1.55
SMM1YNR015W RAD6P06104 172 aa5.36□□□□□ -1.55
SMM1YNR015W YHL042WP38729 150 aa5.35□□□□□ -1.55
SMM1YNR015W ATX1P38636 73 aa5.34□□□□□ -1.55
SMM1YNR015W YCR050CP25630 102 aa5.33□□□□□ -1.56
SMM1YNR015W SKI6P46948 246 aaPredicted RBP5.33□□□□□ -1.56
SMM1YNR015W ATP20Q12233 115 aa5.32□□□□□ -1.56
SMM1YNR015W RPL37BP51402 88 aaKnown RBP5.3□□□□□ -1.56
SMM1YNR015W INO4P13902 151 aa5.29□□□□□ -1.56
SMM1YNR015W YOR304C-AO14468 76 aa5.28□□□□□ -1.56
SMM1YNR015W RPL36AP05745 100 aaPredicted RBP5.26□□□□□ -1.57
SMM1YNR015W YHR073W-AP0C5N7 58 aa5.26□□□□□ -1.57
SMM1YNR015W YAR064WP39563 99 aa5.25□□□□□ -1.57
SMM1YNR015W EMC6Q12431 108 aa5.25□□□□□ -1.57
SMM1YNR015W YDL012CQ12489 107 aa5.24□□□□□ -1.57
SMM1YNR015W YLR285C-AQ3E771 56 aa5.23□□□□□ -1.57
SMM1YNR015W YLR361C-AQ3E795 98 aa5.23□□□□□ -1.57
SMM1YNR015W YER187WP40102 141 aa5.2□□□□□ -1.58
SMM1YNR015W YSY6P38374 65 aa5.17□□□□□ -1.58
SMM1YNR015W YPL080CQ02826 108 aa5.17□□□□□ -1.58
SMM1YNR015W YFL041W-AQ3E817 63 aa5.16□□□□□ -1.58
SMM1YNR015W YGR164WP53291 111 aa5.15□□□□□ -1.59
SMM1YNR015W SLO1Q3E784 85 aa5.14□□□□□ -1.59
SMM1YNR015W YPR153WQ06537 140 aa5.13□□□□□ -1.59
SMM1YNR015W YOR316C-AQ3E806 69 aa5.13□□□□□ -1.59
SMM1YNR015W YKL183C-AQ3E765 70 aa5.1□□□□□ -1.59
SMM1YNR015W YFL065CP43539 102 aa5.07□□□□□ -1.6
SMM1YNR015W YPR203WQ08994 102 aa5.07□□□□□ -1.6
SMM1YNR015W YOL013W-AP0C272 63 aaPredicted RBP5.05□□□□□ -1.6
SMM1YNR015W FYV12Q08559 129 aa5.04□□□□□ -1.6
SMM1YNR015W YJL144WP47009 104 aa5.03□□□□□ -1.6
SMM1YNR015W YJR128WP47162 119 aa5.03□□□□□ -1.6
SMM1YNR015W YGR039WP53225 103 aa5.03□□□□□ -1.6
SMM1YNR015W LIP1Q03579 150 aa5.03□□□□□ -1.6
SMM1YNR015W YOR314WQ12506 109 aa5.01□□□□□ -1.61
SMM1YNR015W HHF1P02309 103 aaKnown RBP5□□□□□ -1.61
SMM1YNR015W Q0017Q9ZZX8 53 aa5□□□□□ -1.61
SMM1YNR015W NOP10Q6Q547 58 aaPredicted RBP4.99□□□□□ -1.61
SMM1YNR015W YIL102CP40488 101 aa4.97□□□□□ -1.61
SMM1YNR015W RUB1Q03919 77 aa4.94□□□□□ -1.62
SMM1YNR015W YDR119W-AQ2V2P9 66 aa4.92□□□□□ -1.62
SMM1YNR015W YGR146C-AQ8TGT9 53 aa4.92□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms