RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W YOR381W-AQ3E804 55 aa1.98□□□□□ -2.09
CAF120YNL278W VAM10Q08474 114 aa1.98□□□□□ -2.09
CAF120YNL278W YOR314WQ12506 109 aa1.97□□□□□ -2.09
CAF120YNL278W YOR192C-CQ3E736 78 aa1.97□□□□□ -2.09
CAF120YNL278W YGR121W-AQ3E816 71 aa1.97□□□□□ -2.09
CAF120YNL278W YGL260WP53056 76 aa1.97□□□□□ -2.09
CAF120YNL278W PPT2Q12036 173 aa1.97□□□□□ -2.09
CAF120YNL278W YAL065CO13511 128 aa1.96□□□□□ -2.1
CAF120YNL278W YSY6P38374 65 aa1.96□□□□□ -2.1
CAF120YNL278W YDL022C-AP0C5L6 82 aa1.96□□□□□ -2.1
CAF120YNL278W YDR246W-AQ3E763 66 aa1.96□□□□□ -2.1
CAF120YNL278W YMR122W-AQ3E842 84 aa1.96□□□□□ -2.1
CAF120YNL278W IRA2P19158 3079 aa1.96□□□□□ -2.1
CAF120YNL278W YJL197C-AP0C5P0 93 aa1.96□□□□□ -2.1
CAF120YNL278W CDC39P25655 2108 aaKnown RBP1.95□□□□□ -2.1
CAF120YNL278W RPC10P40422 70 aa1.95□□□□□ -2.1
CAF120YNL278W YIL014C-AQ02598 104 aa1.95□□□□□ -2.1
CAF120YNL278W YLR162WQ06235 118 aa1.95□□□□□ -2.1
CAF120YNL278W YEL067CP39978 195 aa1.95□□□□□ -2.1
CAF120YNL278W YNR077CP53758 84 aa1.95□□□□□ -2.1
CAF120YNL278W RPL33AP05744 107 aaKnown RBP1.94□□□□□ -2.1
CAF120YNL278W YKR032WP36127 104 aa1.94□□□□□ -2.1
CAF120YNL278W YHR125WP38831 101 aa1.94□□□□□ -2.1
CAF120YNL278W RPL33BP41056 107 aaKnown RBP1.94□□□□□ -2.1
CAF120YNL278W DCV1P43595 202 aa1.94□□□□□ -2.1
CAF120YNL278W YKL065W-AQ2V2P2 73 aa1.94□□□□□ -2.1
CAF120YNL278W YER188C-AP0C0V2 99 aa1.94□□□□□ -2.1
CAF120YNL278W YBR209WP38311 105 aa1.94□□□□□ -2.1
CAF120YNL278W RPL36BO14455 100 aaKnown RBP1.93□□□□□ -2.1
CAF120YNL278W RTC6O14464 93 aa1.93□□□□□ -2.1
CAF120YNL278W RPL36AP05745 100 aaPredicted RBP1.93□□□□□ -2.1
CAF120YNL278W AIM4P38305 123 aaPredicted RBP1.93□□□□□ -2.1
CAF120YNL278W YPR153WQ06537 140 aa1.93□□□□□ -2.1
CAF120YNL278W MRPL38P35996 138 aaPredicted RBP1.93□□□□□ -2.1
CAF120YNL278W YDR115WQ04598 105 aa1.93□□□□□ -2.1
CAF120YNL278W YDR182W-AQ3E796 67 aa1.93□□□□□ -2.1
CAF120YNL278W YGL149WP53116 101 aa1.92□□□□□ -2.1
CAF120YNL278W YGR035W-AQ45U48 73 aa1.92□□□□□ -2.1
CAF120YNL278W TRA1P38811 3744 aa1.92□□□□□ -2.1
CAF120YNL278W YOR008C-AQ3E7B9 74 aa1.92□□□□□ -2.1
CAF120YNL278W COX23P38824 151 aa1.92□□□□□ -2.1
CAF120YNL278W MIG3P39943 394 aa1.92□□□□□ -2.1
CAF120YNL278W MEC1P38111 2368 aa1.91□□□□□ -2.1
CAF120YNL278W SHU1P38751 150 aa1.91□□□□□ -2.1
CAF120YNL278W YMR122CQ03879 124 aa1.91□□□□□ -2.1
CAF120YNL278W YPR013CQ12145 317 aa1.91□□□□□ -2.1
CAF120YNL278W DSE2P38844 325 aa1.91□□□□□ -2.1
CAF120YNL278W KRE9P39005 276 aa1.91□□□□□ -2.1
CAF120YNL278W YAL067W-AQ8TGK6 75 aa1.9□□□□□ -2.1
CAF120YNL278W YHR032W-AP0C5N6 59 aa1.9□□□□□ -2.11
CAF120YNL278W DAD4P69851 72 aa1.9□□□□□ -2.11
CAF120YNL278W YCR095W-AQ3E787 52 aa1.9□□□□□ -2.11
CAF120YNL278W CSF1Q12150 2958 aa1.89□□□□□ -2.11
CAF120YNL278W YFL067WP43537 175 aa1.89□□□□□ -2.11
CAF120YNL278W SPC1P46965 94 aa1.89□□□□□ -2.11
CAF120YNL278W RPL26BP53221 127 aaKnown RBP1.89□□□□□ -2.11
CAF120YNL278W RPL39P04650 51 aa1.89□□□□□ -2.11
CAF120YNL278W TOM7P53507 60 aa1.89□□□□□ -2.11
CAF120YNL278W YCL048W-AQ2V2Q2 79 aa1.89□□□□□ -2.11
CAF120YNL278W POL2P21951 2222 aaKnown RBP1.89□□□□□ -2.11
CAF120YNL278W YMR141CP40211 102 aa1.88□□□□□ -2.11
CAF120YNL278W IGD1P43598 195 aa1.88□□□□□ -2.11
CAF120YNL278W MRX7P53869 86 aa1.88□□□□□ -2.11
CAF120YNL278W IRC21Q04772 201 aa1.88□□□□□ -2.11
CAF120YNL278W YBR027CP38220 110 aa1.88□□□□□ -2.11
CAF120YNL278W YIL163CP40448 117 aa1.88□□□□□ -2.11
CAF120YNL278W YLL066W-BQ8TGJ7 56 aa1.88□□□□□ -2.11
CAF120YNL278W SNA2P56508 79 aa1.87□□□□□ -2.11
CAF120YNL278W PRM7Q12459 698 aa1.87□□□□□ -2.11
CAF120YNL278W YIL156W-BQ2V2P4 73 aa1.87□□□□□ -2.11
CAF120YNL278W HFA1P32874 2273 aa1.86□□□□□ -2.11
CAF120YNL278W PMP3P87284 55 aa1.86□□□□□ -2.11
CAF120YNL278W TAR1Q8TGM6 124 aa1.86□□□□□ -2.11
CAF120YNL278W EDC1P53080 175 aaPredicted RBP1.86□□□□□ -2.11
CAF120YNL278W YPR195CQ06594 109 aa1.86□□□□□ -2.11
CAF120YNL278W CMC4Q3E7A9 73 aa1.86□□□□□ -2.11
CAF120YNL278W YDR010CQ12426 110 aa1.85□□□□□ -2.11
CAF120YNL278W YEL014CP39999 101 aa1.85□□□□□ -2.11
CAF120YNL278W YEL008WP40001 126 aa1.85□□□□□ -2.11
CAF120YNL278W YLR285C-AQ3E771 56 aa1.85□□□□□ -2.11
CAF120YNL278W YNL162W-AQ3E7A8 72 aa1.85□□□□□ -2.11
CAF120YNL278W BSC4P53841 131 aa1.84□□□□□ -2.11
CAF120YNL278W NOP10Q6Q547 58 aaPredicted RBP1.84□□□□□ -2.11
CAF120YNL278W YBL039W-BP0C268 59 aa1.83□□□□□ -2.12
CAF120YNL278W AUA1P32450 94 aa1.83□□□□□ -2.12
CAF120YNL278W GIS2P53849 153 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
CAF120YNL278W COX8P04039 78 aa1.83□□□□□ -2.12
CAF120YNL278W RPS30AP0CX33 63 aaKnown RBP1.83□□□□□ -2.12
CAF120YNL278W RPS30BP0CX34 63 aaKnown RBP1.83□□□□□ -2.12
CAF120YNL278W YOL166W-AQ8TGJ1 51 aa1.83□□□□□ -2.12
CAF120YNL278W YBR219CP38317 127 aa1.82□□□□□ -2.12
CAF120YNL278W BLM10P43583 2143 aa1.82□□□□□ -2.12
CAF120YNL278W ATP18P81450 59 aa1.82□□□□□ -2.12
CAF120YNL278W YHR073W-AP0C5N7 58 aa1.82□□□□□ -2.12
CAF120YNL278W SGF11Q03067 99 aa1.82□□□□□ -2.12
CAF120YNL278W YNL042W-BQ3E7Z2 85 aa1.82□□□□□ -2.12
CAF120YNL278W YMR230W-AQ3E7B5 62 aa1.81□□□□□ -2.12
CAF120YNL278W YOR034C-AQ3E735 80 aa1.8□□□□□ -2.12
CAF120YNL278W YDR210WQ03482 75 aa1.8□□□□□ -2.12
CAF120YNL278W YLL006W-AQ3E814 58 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 109.9 ms