RNA–Protein interactions for RNA: YMR304W

UBP15, Transcript of Ubiquitin-specific protease involved in protein deubiquitination, yeastyeast

Gene UBP15, Length 3,693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP15YMR304W HUG1Q6Q5K6 68 aa1.63□□□□□ -2.15
UBP15YMR304W LIP1Q03579 150 aa1.62□□□□□ -2.15
UBP15YMR304W OST5Q92316 86 aa1.62□□□□□ -2.15
UBP15YMR304W YAL064W-BO13512 126 aa1.62□□□□□ -2.15
UBP15YMR304W AUA1P32450 94 aa1.62□□□□□ -2.15
UBP15YMR304W YCR041WP37265 110 aa1.62□□□□□ -2.15
UBP15YMR304W YLR342W-AQ3E810 57 aa1.61□□□□□ -2.15
UBP15YMR304W YJL027CP47063 138 aaPredicted RBP1.61□□□□□ -2.15
UBP15YMR304W NCE101Q02820 53 aa1.61□□□□□ -2.15
UBP15YMR304W YPR153WQ06537 140 aa1.61□□□□□ -2.15
UBP15YMR304W SMT3Q12306 101 aaKnown RBP1.61□□□□□ -2.15
UBP15YMR304W YFR009W-AP0C5M9 85 aa1.61□□□□□ -2.15
UBP15YMR304W YIL156W-BQ2V2P4 73 aa1.6□□□□□ -2.15
UBP15YMR304W YER175W-AQ8TGU4 54 aa1.6□□□□□ -2.15
UBP15YMR304W YAR023CD6VPM8 179 aa1.6□□□□□ -2.15
UBP15YMR304W PAU7P39545 55 aa1.6□□□□□ -2.15
UBP15YMR304W YJR146WP47174 117 aa1.6□□□□□ -2.15
UBP15YMR304W YGL258W-AQ3E740 77 aa1.6□□□□□ -2.15
UBP15YMR304W YOR381W-AQ3E804 55 aa1.6□□□□□ -2.15
UBP15YMR304W YCL048W-AQ2V2Q2 79 aa1.59□□□□□ -2.15
UBP15YMR304W RRT1P38192 103 aa1.59□□□□□ -2.16
UBP15YMR304W YNL208WP40159 199 aaKnown RBP1.59□□□□□ -2.16
UBP15YMR304W IRC21Q04772 201 aa1.59□□□□□ -2.16
UBP15YMR304W YDL012CQ12489 107 aa1.59□□□□□ -2.16
UBP15YMR304W YAL064WP39711 94 aa1.59□□□□□ -2.16
UBP15YMR304W POR2P40478 281 aa1.59□□□□□ -2.16
UBP15YMR304W TOM7P53507 60 aa1.59□□□□□ -2.16
UBP15YMR304W HOT13P36078 116 aa1.58□□□□□ -2.16
UBP15YMR304W YBL071CP38185 102 aa1.58□□□□□ -2.16
UBP15YMR304W BSC4P53841 131 aa1.58□□□□□ -2.16
UBP15YMR304W YNL042W-BQ3E7Z2 85 aa1.57□□□□□ -2.16
UBP15YMR304W YBR209WP38311 105 aa1.57□□□□□ -2.16
UBP15YMR304W DSE2P38844 325 aa1.57□□□□□ -2.16
UBP15YMR304W EDC2P40023 145 aaPredicted RBP1.57□□□□□ -2.16
UBP15YMR304W KRE9P39005 276 aa1.56□□□□□ -2.16
UBP15YMR304W RPL26BP53221 127 aaKnown RBP1.56□□□□□ -2.16
UBP15YMR304W YMR295CQ03559 197 aa1.56□□□□□ -2.16
UBP15YMR304W CSF1Q12150 2958 aa1.56□□□□□ -2.16
UBP15YMR304W RPS30AP0CX33 63 aaKnown RBP1.56□□□□□ -2.16
UBP15YMR304W RPS30BP0CX34 63 aaKnown RBP1.56□□□□□ -2.16
UBP15YMR304W ATP18P81450 59 aa1.56□□□□□ -2.16
UBP15YMR304W YPR195CQ06594 109 aa1.56□□□□□ -2.16
UBP15YMR304W RPL29P05747 59 aaPredicted RBP1.55□□□□□ -2.16
UBP15YMR304W COX23P38824 151 aa1.55□□□□□ -2.16
UBP15YMR304W VAM10Q08474 114 aa1.55□□□□□ -2.16
UBP15YMR304W YLR307C-AQ3E825 87 aa1.55□□□□□ -2.16
UBP15YMR304W YMR141CP40211 102 aa1.55□□□□□ -2.16
UBP15YMR304W ATP17Q06405 101 aa1.55□□□□□ -2.16
UBP15YMR304W YNL190WP53872 204 aa1.54□□□□□ -2.16
UBP15YMR304W PRM7Q12459 698 aa1.54□□□□□ -2.16
UBP15YMR304W YDL241WQ07738 123 aa1.54□□□□□ -2.16
UBP15YMR304W YOR020W-AQ3E824 90 aa1.54□□□□□ -2.16
UBP15YMR304W YER084WP40057 128 aa1.53□□□□□ -2.16
UBP15YMR304W IGD1P43598 195 aa1.53□□□□□ -2.16
UBP15YMR304W HOR7Q05827 59 aa1.53□□□□□ -2.16
UBP15YMR304W YBR219CP38317 127 aa1.53□□□□□ -2.17
UBP15YMR304W YDR115WQ04598 105 aa1.52□□□□□ -2.17
UBP15YMR304W YGL088WP53151 121 aa1.52□□□□□ -2.17
UBP15YMR304W YOL013W-AP0C272 63 aaPredicted RBP1.52□□□□□ -2.17
UBP15YMR304W YHR032W-AP0C5N6 59 aa1.52□□□□□ -2.17
UBP15YMR304W DDR48P18899 430 aaKnown RBP1.52□□□□□ -2.17
UBP15YMR304W YLR285C-AQ3E771 56 aa1.52□□□□□ -2.17
UBP15YMR304W HMRA2P0CY13 119 aa1.51□□□□□ -2.17
UBP15YMR304W RDS3Q06835 107 aaPredicted RBP1.51□□□□□ -2.17
UBP15YMR304W CCW12Q12127 133 aa1.51□□□□□ -2.17
UBP15YMR304W QCR8P08525 94 aa1.51□□□□□ -2.17
UBP15YMR304W COX14P39103 70 aa1.5□□□□□ -2.17
UBP15YMR304W ATP15P21306 62 aa1.5□□□□□ -2.17
UBP15YMR304W YHR125WP38831 101 aa1.5□□□□□ -2.17
UBP15YMR304W YPR010C-AA5Z2X5 72 aa1.49□□□□□ -2.17
UBP15YMR304W YJR107C-AP0CT86 78 aa1.49□□□□□ -2.17
UBP15YMR304W YHR212W-AP0CX91 67 aa1.49□□□□□ -2.17
UBP15YMR304W AQY2P0CD90 149 aa1.48□□□□□ -2.17
UBP15YMR304W YMR254CQ04838 102 aa1.48□□□□□ -2.17
UBP15YMR304W YBR200W-AQ3E755 54 aa1.48□□□□□ -2.17
UBP15YMR304W YMR122W-AQ3E842 84 aa1.48□□□□□ -2.17
UBP15YMR304W YLR255CO13574 117 aa1.47□□□□□ -2.17
UBP15YMR304W YEL014CP39999 101 aa1.47□□□□□ -2.17
UBP15YMR304W TDA2P40045 126 aa1.47□□□□□ -2.17
UBP15YMR304W LCL2Q08045 131 aa1.47□□□□□ -2.17
UBP15YMR304W HUA1P40325 198 aa1.46□□□□□ -2.18
UBP15YMR304W YOR008C-AQ3E7B9 74 aa1.45□□□□□ -2.18
UBP15YMR304W ECM19Q06011 112 aa1.45□□□□□ -2.18
UBP15YMR304W YOR011W-AQ3E807 68 aa1.45□□□□□ -2.18
UBP15YMR304W HUB1Q6Q546 73 aa1.45□□□□□ -2.18
UBP15YMR304W CMC4Q3E7A9 73 aa1.45□□□□□ -2.18
UBP15YMR304W YEL008WP40001 126 aa1.44□□□□□ -2.18
UBP15YMR304W YFL067WP43537 175 aa1.44□□□□□ -2.18
UBP15YMR304W DAD4P69851 72 aa1.44□□□□□ -2.18
UBP15YMR304W YOR034C-AQ3E735 80 aa1.44□□□□□ -2.18
UBP15YMR304W SPC1P46965 94 aa1.44□□□□□ -2.18
UBP15YMR304W YMR001C-AQ8TGS9 76 aa1.44□□□□□ -2.18
UBP15YMR304W BPH1P25356 2167 aa1.44□□□□□ -2.18
UBP15YMR304W SGF11Q03067 99 aa1.44□□□□□ -2.18
UBP15YMR304W YGL014C-AP0C5N1 53 aa1.43□□□□□ -2.18
UBP15YMR304W YDR010CQ12426 110 aa1.42□□□□□ -2.18
UBP15YMR304W YCR095W-AQ3E787 52 aa1.42□□□□□ -2.18
UBP15YMR304W YLL006W-AQ3E814 58 aa1.42□□□□□ -2.18
UBP15YMR304W LCL1Q02786 101 aa1.41□□□□□ -2.18
UBP15YMR304W YER078W-AQ3E7A2 54 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms