RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C GAT4P40569 121 aa6.12□□□□□ -1.43
SEC61YLR378C YLR156WP0CE96 114 aa6.11□□□□□ -1.43
SEC61YLR378C YLR159WP0CE97 114 aa6.11□□□□□ -1.43
SEC61YLR378C YLR161WP0CE98 114 aa6.11□□□□□ -1.43
SEC61YLR378C YAR1P46683 200 aa6.1□□□□□ -1.43
SEC61YLR378C LCL1Q02786 101 aa6.1□□□□□ -1.43
SEC61YLR378C SKI6P46948 246 aaPredicted RBP6.09□□□□□ -1.43
SEC61YLR378C YDR381C-AQ3E6R5 114 aa6.09□□□□□ -1.43
SEC61YLR378C KRE1P17260 313 aa6.08□□□□□ -1.44
SEC61YLR378C BSC4P53841 131 aa6.07□□□□□ -1.44
SEC61YLR378C YHR007C-AQ07074 71 aa6.07□□□□□ -1.44
SEC61YLR378C ISD11Q6Q560 94 aa6.06□□□□□ -1.44
SEC61YLR378C YHR139C-AO13536 103 aa6.05□□□□□ -1.44
SEC61YLR378C RPL36BO14455 100 aaKnown RBP6.05□□□□□ -1.44
SEC61YLR378C YFR009W-AP0C5M9 85 aa6.05□□□□□ -1.44
SEC61YLR378C GIS2P53849 153 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
SEC61YLR378C YOR072WQ08486 104 aa6.04□□□□□ -1.44
SEC61YLR378C YAL063C-AQ3E791 96 aa6.04□□□□□ -1.44
SEC61YLR378C RSM19P53733 91 aaPredicted RBP6.03□□□□□ -1.44
SEC61YLR378C RAD6P06104 172 aa6.02□□□□□ -1.45
SEC61YLR378C YGR121W-AQ3E816 71 aa6.02□□□□□ -1.45
SEC61YLR378C EMC6Q12431 108 aa6.01□□□□□ -1.45
SEC61YLR378C YLR415CO13578 112 aa6□□□□□ -1.45
SEC61YLR378C YFL065CP43539 102 aa6□□□□□ -1.45
SEC61YLR378C MMS2P53152 137 aa6□□□□□ -1.45
SEC61YLR378C YPR203WQ08994 102 aa6□□□□□ -1.45
SEC61YLR378C YFL041W-AQ3E817 63 aa6□□□□□ -1.45
SEC61YLR378C EDC2P40023 145 aaPredicted RBP5.99□□□□□ -1.45
SEC61YLR378C ICS3P47034 131 aa5.99□□□□□ -1.45
SEC61YLR378C TDA2P40045 126 aa5.99□□□□□ -1.45
SEC61YLR378C SPG1P50088 95 aa5.99□□□□□ -1.45
SEC61YLR378C RPL38P49167 78 aaKnown RBP5.98□□□□□ -1.45
SEC61YLR378C YHR213W-BQ8TGK1 99 aa5.98□□□□□ -1.45
SEC61YLR378C YBL112CQ3E7Y4 105 aa5.97□□□□□ -1.45
SEC61YLR378C EDC1P53080 175 aaPredicted RBP5.96□□□□□ -1.46
SEC61YLR378C YHL042WP38729 150 aa5.95□□□□□ -1.46
SEC61YLR378C SHH4Q06236 168 aa5.95□□□□□ -1.46
SEC61YLR378C TDA8Q6B2U8 126 aa5.95□□□□□ -1.46
SEC61YLR378C COX23P38824 151 aa5.94□□□□□ -1.46
SEC61YLR378C RSM18P40033 138 aa5.94□□□□□ -1.46
SEC61YLR378C YJL133C-AQ3E7A3 74 aa5.94□□□□□ -1.46
SEC61YLR378C YJR085CP47131 105 aaKnown RBP5.93□□□□□ -1.46
SEC61YLR378C YIL002W-AQ3E7Z5 69 aa5.92□□□□□ -1.46
SEC61YLR378C RPP2AP05319 106 aaKnown RBP5.91□□□□□ -1.46
SEC61YLR378C YSY6P38374 65 aa5.91□□□□□ -1.46
SEC61YLR378C YNL184CP53876 108 aa5.91□□□□□ -1.46
SEC61YLR378C YLR285C-AQ3E771 56 aa5.91□□□□□ -1.46
SEC61YLR378C ATP20Q12233 115 aa5.9□□□□□ -1.47
SEC61YLR378C YGL149WP53116 101 aa5.89□□□□□ -1.47
SEC61YLR378C ECM19Q06011 112 aa5.89□□□□□ -1.47
SEC61YLR378C YOR268CQ08734 132 aa5.89□□□□□ -1.47
SEC61YLR378C YMR230W-AQ3E7B5 62 aa5.89□□□□□ -1.47
SEC61YLR378C COF1Q03048 143 aaKnown RBP5.87□□□□□ -1.47
SEC61YLR378C YLR162WQ06235 118 aa5.87□□□□□ -1.47
SEC61YLR378C MIC10Q96VH5 97 aa5.87□□□□□ -1.47
SEC61YLR378C DDR48P18899 430 aaKnown RBP5.86□□□□□ -1.47
SEC61YLR378C YBR027CP38220 110 aa5.86□□□□□ -1.47
SEC61YLR378C YOL014WQ08110 124 aa5.86□□□□□ -1.47
SEC61YLR378C YOR304C-AO14468 76 aa5.85□□□□□ -1.47
SEC61YLR378C MDN1Q12019 4910 aaKnown RBP5.84□□□□□ -1.47
SEC61YLR378C YEL045CP32616 141 aa5.84□□□□□ -1.47
SEC61YLR378C YCR050CP25630 102 aa5.83□□□□□ -1.48
SEC61YLR378C YGR039WP53225 103 aa5.83□□□□□ -1.48
SEC61YLR378C YLR157W-DP0CE99 70 aa5.82□□□□□ -1.48
SEC61YLR378C YJL197C-AP0C5P0 93 aa5.82□□□□□ -1.48
SEC61YLR378C YKL183C-AQ3E765 70 aa5.82□□□□□ -1.48
SEC61YLR378C YOL097W-AQ3E7Y9 61 aa5.79□□□□□ -1.48
SEC61YLR378C KTI11Q3E840 82 aa5.78□□□□□ -1.48
SEC61YLR378C YHL018WP38744 120 aaPredicted RBP5.77□□□□□ -1.49
SEC61YLR378C YFL067WP43537 175 aa5.77□□□□□ -1.49
SEC61YLR378C YDR119W-AQ2V2P9 66 aa5.77□□□□□ -1.49
SEC61YLR378C KSH1Q8TGJ3 72 aa5.76□□□□□ -1.49
SEC61YLR378C HOT13P36078 116 aa5.74□□□□□ -1.49
SEC61YLR378C YPL038W-AQ3E7B4 63 aa5.74□□□□□ -1.49
SEC61YLR378C YCR043CP25361 127 aa5.73□□□□□ -1.49
SEC61YLR378C YOR314WQ12506 109 aa5.73□□□□□ -1.49
SEC61YLR378C YAR064WP39563 99 aa5.7□□□□□ -1.5
SEC61YLR378C YDR010CQ12426 110 aa5.7□□□□□ -1.5
SEC61YLR378C RPL36AP05745 100 aaPredicted RBP5.67□□□□□ -1.5
SEC61YLR378C YHL005CP38752 130 aa5.66□□□□□ -1.5
SEC61YLR378C NOP10Q6Q547 58 aaPredicted RBP5.64□□□□□ -1.51
SEC61YLR378C TOM6P33448 61 aa5.62□□□□□ -1.51
SEC61YLR378C YIL102CP40488 101 aa5.62□□□□□ -1.51
SEC61YLR378C YPL080CQ02826 108 aa5.62□□□□□ -1.51
SEC61YLR378C AIM4P38305 123 aaPredicted RBP5.61□□□□□ -1.51
SEC61YLR378C YER187WP40102 141 aa5.61□□□□□ -1.51
SEC61YLR378C YOL013W-AP0C272 63 aaPredicted RBP5.59□□□□□ -1.51
SEC61YLR378C COX7P10174 60 aa5.58□□□□□ -1.52
SEC61YLR378C LIP1Q03579 150 aa5.58□□□□□ -1.52
SEC61YLR378C YDR246W-AQ3E763 66 aa5.58□□□□□ -1.52
SEC61YLR378C YPR153WQ06537 140 aa5.57□□□□□ -1.52
SEC61YLR378C YDL012CQ12489 107 aa5.57□□□□□ -1.52
SEC61YLR378C YHR073W-AP0C5N7 58 aa5.56□□□□□ -1.52
SEC61YLR378C YDR182W-AQ3E796 67 aa5.56□□□□□ -1.52
SEC61YLR378C YER175W-AQ8TGU4 54 aa5.56□□□□□ -1.52
SEC61YLR378C YLR361C-AQ3E795 98 aa5.53□□□□□ -1.52
SEC61YLR378C YOL166W-AQ8TGJ1 51 aa5.51□□□□□ -1.53
SEC61YLR378C HHF1P02309 103 aaKnown RBP5.49□□□□□ -1.53
SEC61YLR378C YNL122CP53921 115 aaPredicted RBP5.45□□□□□ -1.54
SEC61YLR378C CMC4Q3E7A9 73 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms