RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W TY1B-MR1Q04214 1755 aa0.34□□□□□ -2.36
SEC22YLR268W TY1B-MR2Q04670 1755 aaKnown RBP0.34□□□□□ -2.36
SEC22YLR268W TY2B-DR3Q07791 1770 aaKnown RBP0.34□□□□□ -2.36
SEC22YLR268W TY1B-LR1Q12088 1755 aaKnown RBP0.34□□□□□ -2.36
SEC22YLR268W TY1B-NL1Q12112 1755 aa0.34□□□□□ -2.36
SEC22YLR268W TY2B-OR1Q12113 1770 aa0.34□□□□□ -2.36
SEC22YLR268W TY1B-GR1Q12141 1755 aa0.34□□□□□ -2.36
SEC22YLR268W TY2B-DR1Q12472 1770 aa0.34□□□□□ -2.36
SEC22YLR268W TY1B-BLQ12490 1755 aa0.34□□□□□ -2.36
SEC22YLR268W TY2B-BQ12491 1770 aa0.34□□□□□ -2.36
SEC22YLR268W TY2B-OR2Q12501 1770 aa0.34□□□□□ -2.36
SEC22YLR268W BLM10P43583 2143 aa0.34□□□□□ -2.36
SEC22YLR268W MLP2P40457 1679 aa0.33□□□□□ -2.36
SEC22YLR268W SEC16P48415 2195 aaKnown RBP0.33□□□□□ -2.36
SEC22YLR268W SEC7P11075 2009 aaKnown RBP0.33□□□□□ -2.36
SEC22YLR268W RRP5Q05022 1729 aaKnown RBP0.33□□□□□ -2.36
SEC22YLR268W DNF1P32660 1571 aa0.33□□□□□ -2.36
SEC22YLR268W KOG1P38873 1557 aa0.33□□□□□ -2.36
SEC22YLR268W IML1P47170 1584 aa0.33□□□□□ -2.36
SEC22YLR268W THO2P53552 1597 aaKnown RBP0.33□□□□□ -2.36
SEC22YLR268W RKR1Q04781 1562 aa0.33□□□□□ -2.36
SEC22YLR268W DYN1P36022 4092 aa0.33□□□□□ -2.36
SEC22YLR268W MYO1P08964 1928 aa0.33□□□□□ -2.36
SEC22YLR268W PAU1P0CE88 120 aa0.33□□□□□ -2.36
SEC22YLR268W PAU14P0CE89 120 aa0.33□□□□□ -2.36
SEC22YLR268W RPS11AP0CX47 156 aaKnown RBP0.33□□□□□ -2.36
SEC22YLR268W RPS11BP0CX48 156 aaKnown RBP0.33□□□□□ -2.36
SEC22YLR268W FPR2P32472 135 aa0.33□□□□□ -2.36
SEC22YLR268W YBL071CP38185 102 aa0.33□□□□□ -2.36
SEC22YLR268W YBR032WP38223 100 aa0.33□□□□□ -2.36
SEC22YLR268W SPC1P46965 94 aa0.33□□□□□ -2.36
SEC22YLR268W ERI1P62651 68 aaKnown RBP0.33□□□□□ -2.36
SEC22YLR268W LCL1Q02786 101 aa0.33□□□□□ -2.36
SEC22YLR268W ATP17Q06405 101 aa0.33□□□□□ -2.36
SEC22YLR268W YDR010CQ12426 110 aa0.33□□□□□ -2.36
SEC22YLR268W YLR285C-AQ3E771 56 aa0.33□□□□□ -2.36
SEC22YLR268W YOL097W-AQ3E7Y9 61 aa0.33□□□□□ -2.36
SEC22YLR268W YGR035W-AQ45U48 73 aa0.33□□□□□ -2.36
SEC22YLR268W HUB1Q6Q546 73 aa0.33□□□□□ -2.36
SEC22YLR268W NOP10Q6Q547 58 aaPredicted RBP0.33□□□□□ -2.36
SEC22YLR268W ECM29P38737 1868 aa0.33□□□□□ -2.36
SEC22YLR268W MLP1Q02455 1875 aaKnown RBP0.33□□□□□ -2.36
SEC22YLR268W YOR093CQ12275 1648 aa0.32□□□□□ -2.36
SEC22YLR268W YLR255CO13574 117 aa0.32□□□□□ -2.36
SEC22YLR268W YDL022C-AP0C5L6 82 aa0.32□□□□□ -2.36
SEC22YLR268W YJR107C-AP0CT86 78 aa0.32□□□□□ -2.36
SEC22YLR268W RPS30AP0CX33 63 aaKnown RBP0.32□□□□□ -2.36
SEC22YLR268W RPS30BP0CX34 63 aaKnown RBP0.32□□□□□ -2.36
SEC22YLR268W YIL086CP40503 102 aa0.32□□□□□ -2.36
SEC22YLR268W RPS29BP41058 56 aaKnown RBP0.32□□□□□ -2.36
SEC22YLR268W YDR210WQ03482 75 aa0.32□□□□□ -2.36
SEC22YLR268W PAU20Q08322 120 aa0.32□□□□□ -2.36
SEC22YLR268W YIL156W-BQ2V2P4 73 aa0.32□□□□□ -2.36
SEC22YLR268W YNL042W-BQ3E7Z2 85 aa0.32□□□□□ -2.36
SEC22YLR268W YOL166W-AQ8TGJ1 51 aa0.32□□□□□ -2.36
SEC22YLR268W CHC1P22137 1653 aaKnown RBP0.32□□□□□ -2.36
SEC22YLR268W YBT1P32386 1661 aa0.32□□□□□ -2.36
SEC22YLR268W NUP188P52593 1655 aaKnown RBP0.32□□□□□ -2.36
SEC22YLR268W TOR2P32600 2474 aaKnown RBP0.32□□□□□ -2.36
SEC22YLR268W PDR15Q04182 1529 aaKnown RBP0.32□□□□□ -2.36
SEC22YLR268W USO1P25386 1790 aa0.32□□□□□ -2.36
SEC22YLR268W RIM15P43565 1770 aa0.32□□□□□ -2.36
SEC22YLR268W ARO1P08566 1588 aaKnown RBP0.32□□□□□ -2.36
SEC22YLR268W HIR3P47171 1648 aa0.31□□□□□ -2.36
SEC22YLR268W SPO14P36126 1683 aa0.31□□□□□ -2.36
SEC22YLR268W NTE1Q04958 1679 aa0.31□□□□□ -2.36
SEC22YLR268W BRR2P32639 2163 aaKnown RBP0.31□□□□□ -2.36
SEC22YLR268W SNF2P22082 1703 aa0.31□□□□□ -2.36
SEC22YLR268W COX9P07255 59 aa0.31□□□□□ -2.36
SEC22YLR268W AUA1P32450 94 aa0.31□□□□□ -2.36
SEC22YLR268W SHU1P38751 150 aa0.31□□□□□ -2.36
SEC22YLR268W MRPS12P53732 153 aa0.31□□□□□ -2.36
SEC22YLR268W ATP18P81450 59 aa0.31□□□□□ -2.36
SEC22YLR268W SDH6Q3E785 79 aa0.31□□□□□ -2.36
SEC22YLR268W YOR011W-AQ3E807 68 aa0.31□□□□□ -2.36
SEC22YLR268W YMR122W-AQ3E842 84 aa0.31□□□□□ -2.36
SEC22YLR268W YOR032W-AQ8TGS1 66 aa0.31□□□□□ -2.36
SEC22YLR268W YMR001C-AQ8TGS9 76 aa0.31□□□□□ -2.36
SEC22YLR268W PMD1P32634 1753 aa0.31□□□□□ -2.36
SEC22YLR268W FKS3Q04952 1785 aa0.31□□□□□ -2.36
SEC22YLR268W VMR1P38735 1592 aa0.31□□□□□ -2.36
SEC22YLR268W ATG2P53855 1592 aa0.31□□□□□ -2.36
SEC22YLR268W MOT1P32333 1867 aa0.31□□□□□ -2.36
SEC22YLR268W BPH1P25356 2167 aa0.3□□□□□ -2.36
SEC22YLR268W APC1P53886 1748 aa0.3□□□□□ -2.36
SEC22YLR268W TY4B-HP0C2J7 1802 aa0.3□□□□□ -2.36
SEC22YLR268W YLR157W-DP0CE99 70 aa0.3□□□□□ -2.36
SEC22YLR268W COX7P10174 60 aa0.3□□□□□ -2.36
SEC22YLR268W TOS6P48560 102 aa0.3□□□□□ -2.36
SEC22YLR268W RPL38P49167 78 aaKnown RBP0.3□□□□□ -2.36
SEC22YLR268W EDC1P53080 175 aaPredicted RBP0.3□□□□□ -2.36
SEC22YLR268W YGR025WP53216 100 aa0.3□□□□□ -2.36
SEC22YLR268W YNL190WP53872 204 aa0.3□□□□□ -2.36
SEC22YLR268W SGF11Q03067 99 aa0.3□□□□□ -2.36
SEC22YLR268W YLR146W-AQ2V2P1 62 aa0.3□□□□□ -2.36
SEC22YLR268W YBR201C-AQ2V2Q3 67 aa0.3□□□□□ -2.36
SEC22YLR268W YBR230W-AQ3E762 66 aa0.3□□□□□ -2.36
SEC22YLR268W YBR072C-AQ3E794 53 aa0.3□□□□□ -2.36
SEC22YLR268W YKL018C-AQ3E7A7 99 aa0.3□□□□□ -2.36
SEC22YLR268W BUD3P25558 1636 aa0.3□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 42.5 ms