RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W PAU11P0CE93 120 aa2.43□□□□□ -2.02
LCB5YLR260W FPR2P32472 135 aa2.43□□□□□ -2.02
LCB5YLR260W PAU16P35994 123 aa2.43□□□□□ -2.02
LCB5YLR260W YBR209WP38311 105 aa2.43□□□□□ -2.02
LCB5YLR260W PAU13P38725 120 aa2.43□□□□□ -2.02
LCB5YLR260W PAU10Q03050 120 aa2.43□□□□□ -2.02
LCB5YLR260W PAU20Q08322 120 aa2.43□□□□□ -2.02
LCB5YLR260W PAU9Q3E770 120 aa2.43□□□□□ -2.02
LCB5YLR260W CMC4Q3E7A9 73 aa2.43□□□□□ -2.02
LCB5YLR260W RTC6O14464 93 aa2.42□□□□□ -2.02
LCB5YLR260W RPL26AP05743 127 aaKnown RBP2.42□□□□□ -2.02
LCB5YLR260W MRPL31P14063 131 aaPredicted RBP2.42□□□□□ -2.02
LCB5YLR260W HUA1P40325 198 aa2.42□□□□□ -2.02
LCB5YLR260W DAD4P69851 72 aa2.42□□□□□ -2.02
LCB5YLR260W SEC11P15367 167 aa2.41□□□□□ -2.02
LCB5YLR260W YIL014C-AQ02598 104 aa2.41□□□□□ -2.02
LCB5YLR260W YMR230W-AQ3E7B5 62 aa2.41□□□□□ -2.02
LCB5YLR260W YNL146C-AQ3E7Z1 64 aa2.41□□□□□ -2.02
LCB5YLR260W RPS22AP0C0W1 130 aaKnown RBP2.41□□□□□ -2.02
LCB5YLR260W HPA2Q06592 156 aa2.41□□□□□ -2.02
LCB5YLR260W RGM1Q00453 211 aa2.4□□□□□ -2.02
LCB5YLR260W FIT2Q08906 153 aa2.4□□□□□ -2.02
LCB5YLR260W RPS22BQ3E7Y3 130 aaKnown RBP2.4□□□□□ -2.02
LCB5YLR260W YJL197C-AP0C5P0 93 aa2.4□□□□□ -2.03
LCB5YLR260W YHL005CP38752 130 aa2.4□□□□□ -2.03
LCB5YLR260W YIL163CP40448 117 aa2.4□□□□□ -2.03
LCB5YLR260W YEL014CP39999 101 aa2.39□□□□□ -2.03
LCB5YLR260W RPL26BP53221 127 aaKnown RBP2.39□□□□□ -2.03
LCB5YLR260W YCR001WP25347 104 aa2.38□□□□□ -2.03
LCB5YLR260W YHR022CP38763 256 aa2.38□□□□□ -2.03
LCB5YLR260W YLR194CQ05777 254 aa2.38□□□□□ -2.03
LCB5YLR260W PFY1P07274 126 aa2.38□□□□□ -2.03
LCB5YLR260W COX23P38824 151 aa2.38□□□□□ -2.03
LCB5YLR260W SPI1P40092 148 aa2.38□□□□□ -2.03
LCB5YLR260W TOM7P53507 60 aa2.38□□□□□ -2.03
LCB5YLR260W YMR141CP40211 102 aa2.37□□□□□ -2.03
LCB5YLR260W RPL36BO14455 100 aaKnown RBP2.37□□□□□ -2.03
LCB5YLR260W RPL36AP05745 100 aaPredicted RBP2.37□□□□□ -2.03
LCB5YLR260W RPS11AP0CX47 156 aaKnown RBP2.37□□□□□ -2.03
LCB5YLR260W RPS11BP0CX48 156 aaKnown RBP2.37□□□□□ -2.03
LCB5YLR260W QCR9P22289 66 aa2.37□□□□□ -2.03
LCB5YLR260W YJR146WP47174 117 aa2.37□□□□□ -2.03
LCB5YLR260W CCW12Q12127 133 aa2.37□□□□□ -2.03
LCB5YLR260W QCR8P08525 94 aa2.36□□□□□ -2.03
LCB5YLR260W VAM10Q08474 114 aa2.35□□□□□ -2.03
LCB5YLR260W YHR173CP38864 112 aa2.35□□□□□ -2.03
LCB5YLR260W SPC1P46965 94 aa2.35□□□□□ -2.03
LCB5YLR260W YDR246W-AQ3E763 66 aa2.35□□□□□ -2.03
LCB5YLR260W YGR121W-AQ3E816 71 aa2.35□□□□□ -2.03
LCB5YLR260W YER188C-AP0C0V2 99 aa2.34□□□□□ -2.03
LCB5YLR260W ERI1P62651 68 aaKnown RBP2.34□□□□□ -2.03
LCB5YLR260W SGF11Q03067 99 aa2.34□□□□□ -2.03
LCB5YLR260W YOR314WQ12506 109 aa2.34□□□□□ -2.03
LCB5YLR260W YAL065CO13511 128 aa2.33□□□□□ -2.04
LCB5YLR260W YBR027CP38220 110 aa2.33□□□□□ -2.04
LCB5YLR260W YJL144WP47009 104 aa2.33□□□□□ -2.04
LCB5YLR260W HMRA2P0CY13 119 aa2.33□□□□□ -2.04
LCB5YLR260W YLR162WQ06235 118 aa2.32□□□□□ -2.04
LCB5YLR260W YKL023C-AQ2V2P3 75 aa2.32□□□□□ -2.04
LCB5YLR260W YSY6P38374 65 aa2.32□□□□□ -2.04
LCB5YLR260W YMR122CQ03879 124 aa2.32□□□□□ -2.04
LCB5YLR260W AIM4P38305 123 aaPredicted RBP2.31□□□□□ -2.04
LCB5YLR260W DSE2P38844 325 aa2.31□□□□□ -2.04
LCB5YLR260W GIS2P53849 153 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
LCB5YLR260W YBR200W-AQ3E755 54 aa2.31□□□□□ -2.04
LCB5YLR260W YLL066W-BQ8TGJ7 56 aa2.3□□□□□ -2.04
LCB5YLR260W YCR095W-AQ3E787 52 aa2.3□□□□□ -2.04
LCB5YLR260W YLR342W-AQ3E810 57 aa2.3□□□□□ -2.04
LCB5YLR260W YIL156W-BQ2V2P4 73 aa2.29□□□□□ -2.04
LCB5YLR260W YLR285C-AQ3E771 56 aa2.29□□□□□ -2.04
LCB5YLR260W YHR007C-AQ07074 71 aa2.29□□□□□ -2.04
LCB5YLR260W YGL014C-AP0C5N1 53 aa2.28□□□□□ -2.04
LCB5YLR260W LCL2Q08045 131 aa2.28□□□□□ -2.04
LCB5YLR260W IRC21Q04772 201 aa2.27□□□□□ -2.05
LCB5YLR260W YGR240C-AQ3E786 66 aa2.27□□□□□ -2.05
LCB5YLR260W EDC1P53080 175 aaPredicted RBP2.27□□□□□ -2.05
LCB5YLR260W YKL065W-AQ2V2P2 73 aa2.27□□□□□ -2.05
LCB5YLR260W PAU7P39545 55 aa2.26□□□□□ -2.05
LCB5YLR260W SNA2P56508 79 aa2.26□□□□□ -2.05
LCB5YLR260W YDR010CQ12426 110 aa2.26□□□□□ -2.05
LCB5YLR260W RPL33AP05744 107 aaKnown RBP2.24□□□□□ -2.05
LCB5YLR260W YDL022C-AP0C5L6 82 aa2.24□□□□□ -2.05
LCB5YLR260W MRX7P53869 86 aa2.24□□□□□ -2.05
LCB5YLR260W NOP10Q6Q547 58 aaPredicted RBP2.24□□□□□ -2.05
LCB5YLR260W YEL008WP40001 126 aa2.22□□□□□ -2.05
LCB5YLR260W AIM19P40502 157 aa2.21□□□□□ -2.06
LCB5YLR260W YOR034C-AQ3E735 80 aa2.21□□□□□ -2.06
LCB5YLR260W YMR122W-AQ3E842 84 aa2.21□□□□□ -2.06
LCB5YLR260W BSC4P53841 131 aa2.2□□□□□ -2.06
LCB5YLR260W YNL190WP53872 204 aa2.2□□□□□ -2.06
LCB5YLR260W PMP3P87284 55 aa2.2□□□□□ -2.06
LCB5YLR260W RPS30AP0CX33 63 aaKnown RBP2.19□□□□□ -2.06
LCB5YLR260W RPS30BP0CX34 63 aaKnown RBP2.19□□□□□ -2.06
LCB5YLR260W MGR2Q02889 113 aa2.19□□□□□ -2.06
LCB5YLR260W COA3Q3E7B2 85 aa2.19□□□□□ -2.06
LCB5YLR260W YDR034C-AP0C289 58 aa2.19□□□□□ -2.06
LCB5YLR260W YBR219CP38317 127 aa2.18□□□□□ -2.06
LCB5YLR260W YDR210WQ03482 75 aa2.18□□□□□ -2.06
LCB5YLR260W YNL042W-BQ3E7Z2 85 aa2.18□□□□□ -2.06
LCB5YLR260W YOL166W-AQ8TGJ1 51 aa2.18□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms