RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	RPO21	P04050	1733 aa	Known RBP	0.86	□□□□□ -2.27
RSA3	YLR221C	POL1	P13382	1468 aa		0.86	□□□□□ -2.27
RSA3	YLR221C	SNQ2	P32568	1501 aa	Known RBP	0.85	□□□□□ -2.27
RSA3	YLR221C	YRF1-2	P40105	1681 aa		0.85	□□□□□ -2.27
RSA3	YLR221C	NUM1	Q00402	2748 aa		0.85	□□□□□ -2.27
RSA3	YLR221C	TOM6	P33448	61 aa		0.85	□□□□□ -2.27
RSA3	YLR221C	PDX3	P38075	228 aa	Known RBP	0.85	□□□□□ -2.27
RSA3	YLR221C	YNL042W-B	Q3E7Z2	85 aa		0.85	□□□□□ -2.27
RSA3	YLR221C	TY2B-B	Q12491	1770 aa		0.85	□□□□□ -2.27
RSA3	YLR221C	VTH1	P40438	1549 aa		0.84	□□□□□ -2.27
RSA3	YLR221C	VTH2	P40890	1549 aa		0.84	□□□□□ -2.27
RSA3	YLR221C	NHP2	P32495	156 aa	Predicted RBP	0.84	□□□□□ -2.27
RSA3	YLR221C	YDR119W-A	Q2V2P9	66 aa		0.84	□□□□□ -2.27
RSA3	YLR221C	LSM2	P38203	95 aa	Known RBP	0.83	□□□□□ -2.28
RSA3	YLR221C	TY1B-NL2	Q99337	1749 aa	Known RBP	0.83	□□□□□ -2.28
RSA3	YLR221C	TY1B-JR2	P47100	1755 aa	Known RBP	0.83	□□□□□ -2.28
RSA3	YLR221C	TY1B-ER2	Q03619	1755 aa		0.83	□□□□□ -2.28
RSA3	YLR221C	TY1B-MR1	Q04214	1755 aa		0.83	□□□□□ -2.28
RSA3	YLR221C	TY1B-MR2	Q04670	1755 aa	Known RBP	0.83	□□□□□ -2.28
RSA3	YLR221C	TY1B-LR1	Q12088	1755 aa	Known RBP	0.83	□□□□□ -2.28
RSA3	YLR221C	TY1B-NL1	Q12112	1755 aa		0.83	□□□□□ -2.28
RSA3	YLR221C	TY1B-GR1	Q12141	1755 aa		0.83	□□□□□ -2.28
RSA3	YLR221C	TY1B-BL	Q12490	1755 aa		0.83	□□□□□ -2.28
RSA3	YLR221C	VMR1	P38735	1592 aa		0.83	□□□□□ -2.28
RSA3	YLR221C	NUP188	P52593	1655 aa	Known RBP	0.82	□□□□□ -2.28
RSA3	YLR221C	YJR107C-A	P0CT86	78 aa		0.82	□□□□□ -2.28
RSA3	YLR221C	COX7	P10174	60 aa		0.82	□□□□□ -2.28
RSA3	YLR221C	YOR343C	Q12484	108 aa		0.82	□□□□□ -2.28
RSA3	YLR221C	MHF2	Q3E829	80 aa		0.82	□□□□□ -2.28
RSA3	YLR221C	Q0032	Q9ZZX7	96 aa		0.82	□□□□□ -2.28
RSA3	YLR221C	TY1B-DR3	Q99231	1755 aa		0.82	□□□□□ -2.28
RSA3	YLR221C	PAI3	P01094	68 aa		0.81	□□□□□ -2.28
RSA3	YLR221C	YHR214C-D	P0CX93	97 aa		0.81	□□□□□ -2.28
RSA3	YLR221C	BSC4	P53841	131 aa		0.81	□□□□□ -2.28
RSA3	YLR221C	YPR145C-A	Q2V2P0	78 aa		0.81	□□□□□ -2.28
RSA3	YLR221C	YDR381C-A	Q3E6R5	114 aa		0.81	□□□□□ -2.28
RSA3	YLR221C	PDR12	Q02785	1511 aa		0.8	□□□□□ -2.28
RSA3	YLR221C	YOR314W	Q12506	109 aa		0.8	□□□□□ -2.28
RSA3	YLR221C	TOR2	P32600	2474 aa	Known RBP	0.79	□□□□□ -2.28
RSA3	YLR221C	YAL065C	O13511	128 aa		0.79	□□□□□ -2.28
RSA3	YLR221C	YFR010W-A	P0C5N0	62 aa		0.79	□□□□□ -2.28
RSA3	YLR221C	SWM2	P40342	146 aa		0.79	□□□□□ -2.28
RSA3	YLR221C	YDR034W-B	Q6Q5X2	51 aa		0.79	□□□□□ -2.28
RSA3	YLR221C	TAO3	P40468	2376 aa		0.79	□□□□□ -2.28
RSA3	YLR221C	YFR009W-A	P0C5M9	85 aa		0.78	□□□□□ -2.28
RSA3	YLR221C	YKL065W-A	Q2V2P2	73 aa		0.78	□□□□□ -2.28
RSA3	YLR221C	MLP1	Q02455	1875 aa	Known RBP	0.78	□□□□□ -2.29
RSA3	YLR221C	PAU23	Q07987	124 aa		0.77	□□□□□ -2.29
RSA3	YLR221C	PAU17	Q12370	124 aa		0.77	□□□□□ -2.29
RSA3	YLR221C	YIL156W-B	Q2V2P4	73 aa		0.77	□□□□□ -2.29
RSA3	YLR221C	YGR121W-A	Q3E816	71 aa		0.77	□□□□□ -2.29
RSA3	YLR221C	YFL041W-A	Q3E817	63 aa		0.77	□□□□□ -2.29
RSA3	YLR221C	NOP10	Q6Q547	58 aa	Predicted RBP	0.77	□□□□□ -2.29
RSA3	YLR221C	TIM12	P32830	109 aa		0.76	□□□□□ -2.29
RSA3	YLR221C	YBR016W	P38216	128 aa		0.76	□□□□□ -2.29
RSA3	YLR221C	YOL131W	Q08270	108 aa		0.76	□□□□□ -2.29
RSA3	YLR221C	YOR105W	Q08504	108 aa		0.76	□□□□□ -2.29
RSA3	YLR221C	YBR201C-A	Q2V2Q3	67 aa		0.76	□□□□□ -2.29
RSA3	YLR221C	YGR035W-A	Q45U48	73 aa		0.76	□□□□□ -2.29
RSA3	YLR221C	RRP5	Q05022	1729 aa	Known RBP	0.75	□□□□□ -2.29
RSA3	YLR221C	STT4	P37297	1900 aa		0.75	□□□□□ -2.29
RSA3	YLR221C	ECM29	P38737	1868 aa		0.75	□□□□□ -2.29
RSA3	YLR221C	VPS13	Q07878	3144 aa		0.75	□□□□□ -2.29
RSA3	YLR221C	BPH1	P25356	2167 aa		0.74	□□□□□ -2.29
RSA3	YLR221C	YDL022C-A	P0C5L6	82 aa		0.74	□□□□□ -2.29
RSA3	YLR221C	QCR9	P22289	66 aa		0.74	□□□□□ -2.29
RSA3	YLR221C	FPR2	P32472	135 aa		0.74	□□□□□ -2.29
RSA3	YLR221C	SSS1	P35179	80 aa		0.74	□□□□□ -2.29
RSA3	YLR221C	SPI1	P40092	148 aa		0.74	□□□□□ -2.29
RSA3	YLR221C	YMR122W-A	Q3E842	84 aa		0.74	□□□□□ -2.29
RSA3	YLR221C	UTP20	P35194	2493 aa	Known RBP	0.73	□□□□□ -2.29
RSA3	YLR221C	YDR246W-A	Q3E763	66 aa		0.73	□□□□□ -2.29
RSA3	YLR221C	APC1	P53886	1748 aa		0.72	□□□□□ -2.29
RSA3	YLR221C	NUP192	P47054	1683 aa		0.72	□□□□□ -2.29
RSA3	YLR221C	ERI1	P62651	68 aa	Known RBP	0.72	□□□□□ -2.29
RSA3	YLR221C	VMA9	Q3E7B6	73 aa		0.72	□□□□□ -2.29
RSA3	YLR221C	FKS3	Q04952	1785 aa		0.72	□□□□□ -2.29
RSA3	YLR221C	SEN1	Q00416	2231 aa	Known RBP	0.71	□□□□□ -2.3
RSA3	YLR221C	GCN1	P33892	2672 aa	Known RBP	0.71	□□□□□ -2.3
RSA3	YLR221C	MOT1	P32333	1867 aa		0.71	□□□□□ -2.3
RSA3	YLR221C	FIG2	P25653	1609 aa		0.71	□□□□□ -2.3
RSA3	YLR221C	PMD1	P32634	1753 aa		0.7	□□□□□ -2.3
RSA3	YLR221C	UTP10	P42945	1769 aa	Known RBP	0.7	□□□□□ -2.3
RSA3	YLR221C	YIL102C-A	Q2V2P5	75 aa		0.7	□□□□□ -2.3
RSA3	YLR221C	YIL134C-A	Q45U18	67 aa		0.7	□□□□□ -2.3
RSA3	YLR221C	FLO1	P32768	1537 aa		0.69	□□□□□ -2.3
RSA3	YLR221C	PAU7	P39545	55 aa		0.69	□□□□□ -2.3
RSA3	YLR221C	ATP18	P81450	59 aa		0.69	□□□□□ -2.3
RSA3	YLR221C	ATP17	Q06405	101 aa		0.69	□□□□□ -2.3
RSA3	YLR221C	YKL018C-A	Q3E7A7	99 aa		0.69	□□□□□ -2.3
RSA3	YLR221C	YOR032W-A	Q8TGS1	66 aa		0.69	□□□□□ -2.3
RSA3	YLR221C	YSY6	P38374	65 aa		0.68	□□□□□ -2.3
RSA3	YLR221C	YOL097W-A	Q3E7Y9	61 aa		0.68	□□□□□ -2.3
RSA3	YLR221C	SGF11	Q03067	99 aa		0.67	□□□□□ -2.3
RSA3	YLR221C	YDR182W-A	Q3E796	67 aa		0.67	□□□□□ -2.3
RSA3	YLR221C	TEL1	P38110	2787 aa		0.66	□□□□□ -2.3
RSA3	YLR221C	FMP27	Q06179	2628 aa		0.66	□□□□□ -2.3
RSA3	YLR221C	YDR524C-B	Q3E6R4	66 aa		0.66	□□□□□ -2.3
RSA3	YLR221C	SDH6	Q3E785	79 aa		0.65	□□□□□ -2.31
RSA3	YLR221C	YOL166W-A	Q8TGJ1	51 aa		0.65	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms