RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C DDR2P89113 61 aa1.53□□□□□ -2.16
USB1YLR132C YIL014C-AQ02598 104 aa1.53□□□□□ -2.16
USB1YLR132C HMRA2P0CY13 119 aa1.52□□□□□ -2.17
USB1YLR132C HAP3P13434 144 aa1.52□□□□□ -2.17
USB1YLR132C SHU1P38751 150 aa1.52□□□□□ -2.17
USB1YLR132C YEL014CP39999 101 aa1.52□□□□□ -2.17
USB1YLR132C SNN1P48232 102 aa1.52□□□□□ -2.17
USB1YLR132C YNL122CP53921 115 aaPredicted RBP1.52□□□□□ -2.17
USB1YLR132C APS2Q00381 147 aa1.52□□□□□ -2.17
USB1YLR132C WIP1Q2V2P8 89 aa1.52□□□□□ -2.17
USB1YLR132C RPL29P05747 59 aaPredicted RBP1.51□□□□□ -2.17
USB1YLR132C YHL005CP38752 130 aa1.51□□□□□ -2.17
USB1YLR132C HSP10P38910 106 aa1.51□□□□□ -2.17
USB1YLR132C YNL190WP53872 204 aa1.51□□□□□ -2.17
USB1YLR132C YER181CP40097 107 aa1.5□□□□□ -2.17
USB1YLR132C VMA9Q3E7B6 73 aa1.5□□□□□ -2.17
USB1YLR132C YNL042W-BQ3E7Z2 85 aa1.5□□□□□ -2.17
USB1YLR132C NHP6AP11632 93 aaKnown RBP1.49□□□□□ -2.17
USB1YLR132C UGX2P32772 223 aa1.49□□□□□ -2.17
USB1YLR132C YBR027CP38220 110 aa1.49□□□□□ -2.17
USB1YLR132C ERV14P53173 138 aa1.49□□□□□ -2.17
USB1YLR132C YLL006W-AQ3E814 58 aa1.49□□□□□ -2.17
USB1YLR132C GLC8P41818 229 aa1.48□□□□□ -2.17
USB1YLR132C BSC4P53841 131 aa1.48□□□□□ -2.17
USB1YLR132C RPS22BQ3E7Y3 130 aaKnown RBP1.48□□□□□ -2.17
USB1YLR132C COX7P10174 60 aa1.47□□□□□ -2.17
USB1YLR132C GSP1P32835 219 aaKnown RBP1.46□□□□□ -2.18
USB1YLR132C AIM11P87275 137 aa1.46□□□□□ -2.18
USB1YLR132C HPA2Q06592 156 aa1.46□□□□□ -2.18
USB1YLR132C YBR230W-AQ3E762 66 aa1.46□□□□□ -2.18
USB1YLR132C MRPL11P36521 249 aaPredicted RBP1.45□□□□□ -2.18
USB1YLR132C RPS29AP41057 56 aaKnown RBP1.45□□□□□ -2.18
USB1YLR132C MRPS12P53732 153 aa1.45□□□□□ -2.18
USB1YLR132C YOR072WQ08486 104 aa1.45□□□□□ -2.18
USB1YLR132C YJL127C-BQ3E828 52 aa1.45□□□□□ -2.18
USB1YLR132C YER188C-AP0C0V2 99 aa1.44□□□□□ -2.18
USB1YLR132C YDL022C-AP0C5L6 82 aa1.44□□□□□ -2.18
USB1YLR132C SRB6P32570 121 aa1.44□□□□□ -2.18
USB1YLR132C YMR103CQ04436 120 aa1.44□□□□□ -2.18
USB1YLR132C ATP14Q12349 124 aa1.44□□□□□ -2.18
USB1YLR132C Q0017Q9ZZX8 53 aa1.44□□□□□ -2.18
USB1YLR132C FYV5P25585 152 aa1.43□□□□□ -2.18
USB1YLR132C YDR210WQ03482 75 aa1.43□□□□□ -2.18
USB1YLR132C YPR153WQ06537 140 aa1.43□□□□□ -2.18
USB1YLR132C ICY1Q04329 127 aa1.42□□□□□ -2.18
USB1YLR132C SCS22Q6Q595 175 aa1.42□□□□□ -2.18
USB1YLR132C RPS29BP41058 56 aaKnown RBP1.41□□□□□ -2.18
USB1YLR132C VMA21P41806 77 aa1.41□□□□□ -2.18
USB1YLR132C IRC21Q04772 201 aa1.41□□□□□ -2.18
USB1YLR132C YPL261CQ08976 102 aa1.41□□□□□ -2.18
USB1YLR132C RPL36BO14455 100 aaKnown RBP1.4□□□□□ -2.19
USB1YLR132C PAU17Q12370 124 aa1.4□□□□□ -2.19
USB1YLR132C ATG8P38182 117 aaRIP-Chip data1.39□□□□□ -2.19not detected
USB1YLR132C YJR128WP47162 119 aa1.39□□□□□ -2.19
USB1YLR132C YLR157W-DP0CE99 70 aa1.37□□□□□ -2.19
USB1YLR132C FUN14P18411 198 aa1.37□□□□□ -2.19
USB1YLR132C YJL009WP47078 108 aa1.37□□□□□ -2.19
USB1YLR132C YOL097W-AQ3E7Y9 61 aa1.37□□□□□ -2.19
USB1YLR132C YOL013W-AP0C272 63 aaPredicted RBP1.36□□□□□ -2.19
USB1YLR132C RSM18P40033 138 aa1.36□□□□□ -2.19
USB1YLR132C SFT1P43682 97 aa1.36□□□□□ -2.19
USB1YLR132C ARL3Q02804 198 aa1.35□□□□□ -2.19
USB1YLR132C HHO1P53551 258 aa1.34□□□□□ -2.19
USB1YLR132C PAU23Q07987 124 aa1.34□□□□□ -2.19
USB1YLR132C FYV7Q12247 151 aa1.34□□□□□ -2.19
USB1YLR132C YOR034C-AQ3E735 80 aa1.34□□□□□ -2.19
USB1YLR132C YHR213W-BQ8TGK1 99 aa1.34□□□□□ -2.19
USB1YLR132C COF1Q03048 143 aaKnown RBP1.32□□□□□ -2.2
USB1YLR132C YKL044WP36092 106 aa1.31□□□□□ -2.2
USB1YLR132C LSM8P47093 109 aaKnown RBP1.31□□□□□ -2.2
USB1YLR132C YGR039WP53225 103 aa1.3□□□□□ -2.2
USB1YLR132C RSM19P53733 91 aaPredicted RBP1.3□□□□□ -2.2
USB1YLR132C SEN15Q04675 128 aa1.3□□□□□ -2.2
USB1YLR132C YHR073W-AP0C5N7 58 aa1.29□□□□□ -2.2
USB1YLR132C MRPL44P19956 98 aa1.29□□□□□ -2.2
USB1YLR132C YHR130CP38834 111 aa1.29□□□□□ -2.2
USB1YLR132C YER187WP40102 141 aa1.29□□□□□ -2.2
USB1YLR132C NAT5Q08689 176 aa1.29□□□□□ -2.2
USB1YLR132C MIC10Q96VH5 97 aa1.29□□□□□ -2.2
USB1YLR132C NHP2P32495 156 aaPredicted RBP1.28□□□□□ -2.2
USB1YLR132C HHY1P39982 102 aa1.28□□□□□ -2.2
USB1YLR132C SOM1Q05676 74 aa1.28□□□□□ -2.2
USB1YLR132C YGL014C-AP0C5N1 53 aa1.27□□□□□ -2.21
USB1YLR132C EDC1P53080 175 aaPredicted RBP1.27□□□□□ -2.21
USB1YLR132C CNL1Q06333 122 aa1.27□□□□□ -2.21
USB1YLR132C ZEO1Q08245 113 aa1.27□□□□□ -2.21
USB1YLR132C YBR016WP38216 128 aa1.26□□□□□ -2.21
USB1YLR132C GTT1P40582 234 aa1.26□□□□□ -2.21
USB1YLR132C YGR164WP53291 111 aa1.26□□□□□ -2.21
USB1YLR132C YMR122CQ03879 124 aa1.25□□□□□ -2.21
USB1YLR132C YLR361C-AQ3E795 98 aa1.25□□□□□ -2.21
USB1YLR132C YJL133C-AQ3E7A3 74 aa1.25□□□□□ -2.21
USB1YLR132C COA6Q3E846 104 aa1.25□□□□□ -2.21
USB1YLR132C HUR1P45820 110 aa1.24□□□□□ -2.21
USB1YLR132C MSL1P40567 111 aaPredicted RBP1.23□□□□□ -2.21
USB1YLR132C YOR316C-AQ3E806 69 aa1.23□□□□□ -2.21
USB1YLR132C YFR009W-AP0C5M9 85 aa1.22□□□□□ -2.21
USB1YLR132C YJR107C-AP0CT86 78 aa1.21□□□□□ -2.22
USB1YLR132C ICS3P47034 131 aa1.21□□□□□ -2.22
USB1YLR132C COX23P38824 151 aa1.2□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms