RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W YNR077CP53758 84 aa2.78□□□□□ -1.96
LDB18YLL049W YLR296WQ05898 108 aa2.78□□□□□ -1.96
LDB18YLL049W ATP15P21306 62 aa2.77□□□□□ -1.97
LDB18YLL049W YKR041WP36134 250 aa2.77□□□□□ -1.97
LDB18YLL049W SHU1P38751 150 aa2.77□□□□□ -1.97
LDB18YLL049W YNL198CP40166 100 aa2.77□□□□□ -1.97
LDB18YLL049W YNL122CP53921 115 aaPredicted RBP2.77□□□□□ -1.97
LDB18YLL049W AIM11P87275 137 aa2.77□□□□□ -1.97
LDB18YLL049W YIL102C-AQ2V2P5 75 aa2.77□□□□□ -1.97
LDB18YLL049W YNL184CP53876 108 aa2.76□□□□□ -1.97
LDB18YLL049W ELC1Q03071 99 aa2.76□□□□□ -1.97
LDB18YLL049W RPL29P05747 59 aaPredicted RBP2.75□□□□□ -1.97
LDB18YLL049W MRPS12P53732 153 aa2.75□□□□□ -1.97
LDB18YLL049W YNL190WP53872 204 aa2.75□□□□□ -1.97
LDB18YLL049W PAI3P01094 68 aa2.74□□□□□ -1.97
LDB18YLL049W YER181CP40097 107 aa2.74□□□□□ -1.97
LDB18YLL049W YBR027CP38220 110 aa2.73□□□□□ -1.97
LDB18YLL049W POP7P38291 140 aa2.73□□□□□ -1.97
LDB18YLL049W YHL005CP38752 130 aa2.73□□□□□ -1.97
LDB18YLL049W YNL042W-BQ3E7Z2 85 aa2.73□□□□□ -1.97
LDB18YLL049W YLL006W-AQ3E814 58 aa2.73□□□□□ -1.97
LDB18YLL049W YFR032C-BQ8TGU2 87 aa2.73□□□□□ -1.97
LDB18YLL049W YHR032W-AP0C5N6 59 aa2.72□□□□□ -1.97
LDB18YLL049W UGX2P32772 223 aa2.72□□□□□ -1.97
LDB18YLL049W QCR8P08525 94 aa2.71□□□□□ -1.98
LDB18YLL049W LSM6Q06406 86 aaKnown RBP2.71□□□□□ -1.98
LDB18YLL049W BET1P22804 142 aa2.7□□□□□ -1.98
LDB18YLL049W NHP2P32495 156 aaPredicted RBP2.69□□□□□ -1.98
LDB18YLL049W BSC4P53841 131 aa2.69□□□□□ -1.98
LDB18YLL049W YDL012CQ12489 107 aa2.69□□□□□ -1.98
LDB18YLL049W TSC3Q3E790 80 aa2.68□□□□□ -1.98
LDB18YLL049W SKI6P46948 246 aaPredicted RBP2.67□□□□□ -1.98
LDB18YLL049W RUB1Q03919 77 aa2.67□□□□□ -1.98
LDB18YLL049W SHH4Q06236 168 aa2.67□□□□□ -1.98
LDB18YLL049W YBR230W-AQ3E762 66 aa2.67□□□□□ -1.98
LDB18YLL049W RPL26AP05743 127 aaKnown RBP2.66□□□□□ -1.98
LDB18YLL049W YHR130CP38834 111 aa2.66□□□□□ -1.98
LDB18YLL049W RPL26BP53221 127 aaKnown RBP2.66□□□□□ -1.98
LDB18YLL049W RGM1Q00453 211 aa2.66□□□□□ -1.98
LDB18YLL049W HPA2Q06592 156 aa2.66□□□□□ -1.98
LDB18YLL049W YHR007C-AQ07074 71 aa2.66□□□□□ -1.98
LDB18YLL049W COX7P10174 60 aa2.65□□□□□ -1.99
LDB18YLL049W FYV12Q08559 129 aa2.65□□□□□ -1.99
LDB18YLL049W SLO1Q3E784 85 aa2.65□□□□□ -1.99
LDB18YLL049W YJL127C-BQ3E828 52 aa2.65□□□□□ -1.99
LDB18YLL049W RPA12P32529 125 aaKnown RBP2.63□□□□□ -1.99
LDB18YLL049W ATX1P38636 73 aa2.63□□□□□ -1.99
LDB18YLL049W RPS29AP41057 56 aaKnown RBP2.63□□□□□ -1.99
LDB18YLL049W YOR072WQ08486 104 aa2.63□□□□□ -1.99
LDB18YLL049W RPS28BP0C0X0 67 aaKnown RBP2.62□□□□□ -1.99
LDB18YLL049W DSE2P38844 325 aa2.62□□□□□ -1.99
LDB18YLL049W HUR1P45820 110 aa2.62□□□□□ -1.99
LDB18YLL049W YJL144WP47009 104 aa2.62□□□□□ -1.99
LDB18YLL049W YDR210WQ03482 75 aa2.62□□□□□ -1.99
LDB18YLL049W RPS28AQ3E7X9 67 aaPredicted RBP2.62□□□□□ -1.99
LDB18YLL049W YLR236CA0A023PZG4 107 aa2.61□□□□□ -1.99
LDB18YLL049W FYV5P25585 152 aa2.61□□□□□ -1.99
LDB18YLL049W IRC21Q04772 201 aa2.61□□□□□ -1.99
LDB18YLL049W INO4P13902 151 aa2.6□□□□□ -1.99
LDB18YLL049W YCR085WP25650 117 aa2.6□□□□□ -1.99
LDB18YLL049W ICY1Q04329 127 aa2.6□□□□□ -1.99
LDB18YLL049W YOL014WQ08110 124 aa2.6□□□□□ -1.99
LDB18YLL049W YOR034C-AQ3E735 80 aa2.6□□□□□ -1.99
LDB18YLL049W YML100W-AQ8TGT0 57 aa2.6□□□□□ -1.99
LDB18YLL049W Q0017Q9ZZX8 53 aa2.6□□□□□ -1.99
LDB18YLL049W YDR381C-AQ3E6R5 114 aa2.59□□□□□ -1.99
LDB18YLL049W YFL065CP43539 102 aa2.58□□□□□ -2
LDB18YLL049W YPR203WQ08994 102 aa2.58□□□□□ -2
LDB18YLL049W PBI2P0CT04 75 aaKnown RBP2.57□□□□□ -2
LDB18YLL049W YLR412C-AQ3E742 68 aa2.57□□□□□ -2
LDB18YLL049W RPL36BO14455 100 aaKnown RBP2.56□□□□□ -2
LDB18YLL049W YJR107C-AP0CT86 78 aa2.56□□□□□ -2
LDB18YLL049W MPC3P53311 146 aa2.56□□□□□ -2
LDB18YLL049W EMC6Q12431 108 aa2.56□□□□□ -2
LDB18YLL049W YFL041W-AQ3E817 63 aa2.56□□□□□ -2
LDB18YLL049W RPS29BP41058 56 aaKnown RBP2.55□□□□□ -2
LDB18YLL049W YJR128WP47162 119 aa2.55□□□□□ -2
LDB18YLL049W ATP18P81450 59 aa2.53□□□□□ -2
LDB18YLL049W YFR009W-AP0C5M9 85 aa2.52□□□□□ -2.01
LDB18YLL049W RAD6P06104 172 aa2.51□□□□□ -2.01
LDB18YLL049W SFT1P43682 97 aa2.51□□□□□ -2.01
LDB18YLL049W RSM19P53733 91 aaPredicted RBP2.51□□□□□ -2.01
LDB18YLL049W YJL009WP47078 108 aa2.5□□□□□ -2.01
LDB18YLL049W EDC1P53080 175 aaPredicted RBP2.5□□□□□ -2.01
LDB18YLL049W YDR119W-AQ2V2P9 66 aa2.5□□□□□ -2.01
LDB18YLL049W YHL042WP38729 150 aa2.49□□□□□ -2.01
LDB18YLL049W RSM18P40033 138 aa2.49□□□□□ -2.01
LDB18YLL049W YOL097W-AQ3E7Y9 61 aa2.49□□□□□ -2.01
LDB18YLL049W YLR157W-DP0CE99 70 aa2.48□□□□□ -2.01
LDB18YLL049W YSY6P38374 65 aa2.48□□□□□ -2.01
LDB18YLL049W SBH1P52870 82 aa2.48□□□□□ -2.01
LDB18YLL049W ICS3P47034 131 aa2.47□□□□□ -2.01
LDB18YLL049W ATP20Q12233 115 aa2.47□□□□□ -2.01
LDB18YLL049W YPL038W-AQ3E7B4 63 aa2.47□□□□□ -2.01
LDB18YLL049W COX23P38824 151 aa2.46□□□□□ -2.02
LDB18YLL049W YGR039WP53225 103 aa2.46□□□□□ -2.02
LDB18YLL049W COF1Q03048 143 aaKnown RBP2.46□□□□□ -2.02
LDB18YLL049W YLR285C-AQ3E771 56 aa2.46□□□□□ -2.02
LDB18YLL049W TDA2P40045 126 aa2.45□□□□□ -2.02
LDB18YLL049W RPL38P49167 78 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms