RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C YBR219CP38317 127 aa4.93□□□□□ -1.62
HEL1YKR017C CMC4Q3E7A9 73 aa4.93□□□□□ -1.62
HEL1YKR017C YPR108W-AQ3E7B3 70 aa4.93□□□□□ -1.62
HEL1YKR017C CCW14O13547 238 aa4.92□□□□□ -1.62
HEL1YKR017C YJR107C-AP0CT86 78 aa4.92□□□□□ -1.62
HEL1YKR017C YDR461C-AQ2V2P7 80 aa4.92□□□□□ -1.62
HEL1YKR017C MRPS12P53732 153 aa4.92□□□□□ -1.62
HEL1YKR017C ECM19Q06011 112 aa4.92□□□□□ -1.62
HEL1YKR017C YHR032W-AP0C5N6 59 aa4.91□□□□□ -1.62
HEL1YKR017C FPR1P20081 114 aaKnown RBP4.91□□□□□ -1.62
HEL1YKR017C ATP17Q06405 101 aa4.91□□□□□ -1.62
HEL1YKR017C RPL38P49167 78 aaKnown RBP4.9□□□□□ -1.62
HEL1YKR017C CCW12Q12127 133 aa4.9□□□□□ -1.62
HEL1YKR017C YCR001WP25347 104 aa4.89□□□□□ -1.63
HEL1YKR017C YEL014CP39999 101 aa4.89□□□□□ -1.63
HEL1YKR017C YDR115WQ04598 105 aa4.89□□□□□ -1.63
HEL1YKR017C DAD4P69851 72 aa4.88□□□□□ -1.63
HEL1YKR017C YSF3P0C074 85 aaPredicted RBP4.87□□□□□ -1.63
HEL1YKR017C YMR254CQ04838 102 aa4.86□□□□□ -1.63
HEL1YKR017C ATP18P81450 59 aa4.85□□□□□ -1.63
HEL1YKR017C FAS1P07149 2051 aaKnown RBP4.84□□□□□ -1.63
HEL1YKR017C AQY2P0CD90 149 aa4.83□□□□□ -1.64
HEL1YKR017C YIL102CP40488 101 aa4.83□□□□□ -1.64
HEL1YKR017C YNL122CP53921 115 aaPredicted RBP4.83□□□□□ -1.64
HEL1YKR017C YPR195CQ06594 109 aa4.83□□□□□ -1.64
HEL1YKR017C YOR008C-AQ3E7B9 74 aa4.83□□□□□ -1.64
HEL1YKR017C BRR2P32639 2163 aaKnown RBP4.82□□□□□ -1.64
HEL1YKR017C YMR001C-AQ8TGS9 76 aa4.82□□□□□ -1.64
HEL1YKR017C YGL014C-AP0C5N1 53 aa4.81□□□□□ -1.64
HEL1YKR017C YLR157W-DP0CE99 70 aa4.81□□□□□ -1.64
HEL1YKR017C YMR141CP40211 102 aa4.81□□□□□ -1.64
HEL1YKR017C COX8P04039 78 aa4.8□□□□□ -1.64
HEL1YKR017C RPL33BP41056 107 aaKnown RBP4.8□□□□□ -1.64
HEL1YKR017C SGF11Q03067 99 aa4.8□□□□□ -1.64
HEL1YKR017C YDR210WQ03482 75 aa4.8□□□□□ -1.64
HEL1YKR017C SDH6Q3E785 79 aa4.8□□□□□ -1.64
HEL1YKR017C YFL067WP43537 175 aa4.77□□□□□ -1.65
HEL1YKR017C YJL027CP47063 138 aaPredicted RBP4.77□□□□□ -1.65
HEL1YKR017C LCL2Q08045 131 aa4.77□□□□□ -1.65
HEL1YKR017C YAL067W-AQ8TGK6 75 aa4.77□□□□□ -1.65
HEL1YKR017C YPR010C-AA5Z2X5 72 aa4.76□□□□□ -1.65
HEL1YKR017C YFR009W-AP0C5M9 85 aa4.76□□□□□ -1.65
HEL1YKR017C YGL258W-AQ3E740 77 aa4.76□□□□□ -1.65
HEL1YKR017C YLR342W-AQ3E810 57 aa4.73□□□□□ -1.65
HEL1YKR017C YMR122W-AQ3E842 84 aa4.73□□□□□ -1.65
HEL1YKR017C YGL041C-BQ3E750 60 aa4.69□□□□□ -1.66
HEL1YKR017C YOL013W-AP0C272 63 aaPredicted RBP4.68□□□□□ -1.66
HEL1YKR017C YJR146WP47174 117 aa4.67□□□□□ -1.66
HEL1YKR017C YOL085CQ99345 113 aa4.67□□□□□ -1.66
HEL1YKR017C YDR114CQ04597 100 aa4.66□□□□□ -1.66
HEL1YKR017C YEL008WP40001 126 aa4.65□□□□□ -1.66
HEL1YKR017C RPL33AP05744 107 aaKnown RBP4.64□□□□□ -1.67
HEL1YKR017C YBR201C-AQ2V2Q3 67 aa4.64□□□□□ -1.67
HEL1YKR017C Q0032Q9ZZX7 96 aa4.64□□□□□ -1.67
HEL1YKR017C YOL097W-AQ3E7Y9 61 aa4.63□□□□□ -1.67
HEL1YKR017C YBL039W-BP0C268 59 aa4.61□□□□□ -1.67
HEL1YKR017C YER084WP40057 128 aa4.61□□□□□ -1.67
HEL1YKR017C SEN1Q00416 2231 aaKnown RBP4.59□□□□□ -1.67
HEL1YKR017C VAM10Q08474 114 aa4.59□□□□□ -1.67
HEL1YKR017C YDL012CQ12489 107 aa4.59□□□□□ -1.67
HEL1YKR017C MVB12P42939 101 aa4.57□□□□□ -1.68
HEL1YKR017C BLM10P43583 2143 aa4.57□□□□□ -1.68
HEL1YKR017C YLR122CQ12312 125 aa4.57□□□□□ -1.68
HEL1YKR017C YGR240C-AQ3E786 66 aa4.56□□□□□ -1.68
HEL1YKR017C YLL006W-AQ3E814 58 aa4.56□□□□□ -1.68
HEL1YKR017C YLR255CO13574 117 aa4.54□□□□□ -1.68
HEL1YKR017C BEM2P39960 2167 aaKnown RBP4.54□□□□□ -1.68
HEL1YKR017C YJL144WP47009 104 aa4.54□□□□□ -1.68
HEL1YKR017C YGR025WP53216 100 aa4.53□□□□□ -1.68
HEL1YKR017C YHR213W-BQ8TGK1 99 aa4.53□□□□□ -1.68
HEL1YKR017C AUA1P32450 94 aa4.51□□□□□ -1.69
HEL1YKR017C YHR007C-AQ07074 71 aa4.51□□□□□ -1.69
HEL1YKR017C YBR200W-AQ3E755 54 aa4.5□□□□□ -1.69
HEL1YKR017C YJL133C-AQ3E7A3 74 aa4.49□□□□□ -1.69
HEL1YKR017C YOR011W-AQ3E807 68 aa4.49□□□□□ -1.69
HEL1YKR017C TAR1Q8TGM6 124 aa4.49□□□□□ -1.69
HEL1YKR017C SEC16P48415 2195 aaKnown RBP4.49□□□□□ -1.69
HEL1YKR017C YOR072WQ08486 104 aa4.48□□□□□ -1.69
HEL1YKR017C YCL042WP25572 119 aa4.47□□□□□ -1.69
HEL1YKR017C NCE101Q02820 53 aa4.47□□□□□ -1.69
HEL1YKR017C YIL086CP40503 102 aa4.46□□□□□ -1.7
HEL1YKR017C ACC1Q00955 2233 aaKnown RBP4.45□□□□□ -1.7
HEL1YKR017C YKR073CP36153 106 aa4.45□□□□□ -1.7
HEL1YKR017C FAB1P34756 2278 aa4.43□□□□□ -1.7
HEL1YKR017C COX7P10174 60 aa4.41□□□□□ -1.7
HEL1YKR017C SIP18P50263 79 aa4.41□□□□□ -1.7
HEL1YKR017C YAR064WP39563 99 aa4.4□□□□□ -1.71
HEL1YKR017C RPL29P05747 59 aaPredicted RBP4.38□□□□□ -1.71
HEL1YKR017C YJR128WP47162 119 aa4.37□□□□□ -1.71
HEL1YKR017C YLR307C-AQ3E825 87 aa4.37□□□□□ -1.71
HEL1YKR017C YOR394C-AQ8TGJ0 55 aa4.37□□□□□ -1.71
HEL1YKR017C YBR230W-AQ3E762 66 aa4.36□□□□□ -1.71
HEL1YKR017C LCL1Q02786 101 aa4.35□□□□□ -1.71
HEL1YKR017C YNL162W-AQ3E7A8 72 aa4.32□□□□□ -1.72
HEL1YKR017C DDR2P89113 61 aa4.31□□□□□ -1.72
HEL1YKR017C YJL127C-BQ3E828 52 aa4.3□□□□□ -1.72
HEL1YKR017C GIS2P53849 153 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
HEL1YKR017C YJL009WP47078 108 aa4.27□□□□□ -1.73
HEL1YKR017C RDS3Q06835 107 aaPredicted RBP4.26□□□□□ -1.73
HEL1YKR017C RPL43AP0CX25 92 aaKnown RBP4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 262.1 ms