RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL1	YJR005W	YKR032W	P36127	104 aa		0.79	□□□□□ -2.28
APL1	YJR005W	SHU1	P38751	150 aa		0.79	□□□□□ -2.28
APL1	YJR005W	DAD4	P69851	72 aa		0.79	□□□□□ -2.28
APL1	YJR005W	YMR244W	Q04018	355 aa		0.79	□□□□□ -2.28
APL1	YJR005W	YMR321C	Q04898	105 aa		0.79	□□□□□ -2.28
APL1	YJR005W	YPR195C	Q06594	109 aa		0.79	□□□□□ -2.28
APL1	YJR005W	FIT2	Q08906	153 aa		0.79	□□□□□ -2.28
APL1	YJR005W	YPR013C	Q12145	317 aa		0.79	□□□□□ -2.28
APL1	YJR005W	CMC4	Q3E7A9	73 aa		0.79	□□□□□ -2.28
APL1	YJR005W	COA3	Q3E7B2	85 aa		0.79	□□□□□ -2.28
APL1	YJR005W	YNL042W-B	Q3E7Z2	85 aa		0.79	□□□□□ -2.28
APL1	YJR005W	HUG1	Q6Q5K6	68 aa		0.79	□□□□□ -2.28
APL1	YJR005W	YOL166W-A	Q8TGJ1	51 aa		0.79	□□□□□ -2.28
APL1	YJR005W	RPS11A	P0CX47	156 aa	Known RBP	0.79	□□□□□ -2.28
APL1	YJR005W	RPS11B	P0CX48	156 aa	Known RBP	0.79	□□□□□ -2.28
APL1	YJR005W	FPR1	P20081	114 aa	Known RBP	0.79	□□□□□ -2.28
APL1	YJR005W	YBR219C	P38317	127 aa		0.79	□□□□□ -2.28
APL1	YJR005W	HUB1	Q6Q546	73 aa		0.79	□□□□□ -2.28
APL1	YJR005W	FIG2	P25653	1609 aa		0.78	□□□□□ -2.28
APL1	YJR005W	YJR107C-A	P0CT86	78 aa		0.78	□□□□□ -2.28
APL1	YJR005W	YBR027C	P38220	110 aa		0.78	□□□□□ -2.28
APL1	YJR005W	SGF11	Q03067	99 aa		0.78	□□□□□ -2.28
APL1	YJR005W	YOL085C	Q99345	113 aa		0.78	□□□□□ -2.28
APL1	YJR005W	COX8	P04039	78 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YHR032W-A	P0C5N6	59 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YLR157W-D	P0CE99	70 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YEL014C	P39999	101 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YMR141C	P40211	102 aa		0.77	□□□□□ -2.29
APL1	YJR005W	MGR2	Q02889	113 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YPR108W-A	Q3E7B3	70 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YSF3	P0C074	85 aa	Predicted RBP	0.77	□□□□□ -2.29
APL1	YJR005W	AQY2	P0CD90	149 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YCR001W	P25347	104 aa		0.77	□□□□□ -2.29
APL1	YJR005W	TOS6	P48560	102 aa		0.77	□□□□□ -2.29
APL1	YJR005W	MRPS12	P53732	153 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YNL122C	P53921	115 aa	Predicted RBP	0.77	□□□□□ -2.29
APL1	YJR005W	ATP18	P81450	59 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YDR115W	Q04598	105 aa		0.77	□□□□□ -2.29
APL1	YJR005W	ATP17	Q06405	101 aa		0.77	□□□□□ -2.29
APL1	YJR005W	LCL2	Q08045	131 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YCL048W-A	Q2V2Q2	79 aa		0.77	□□□□□ -2.29
APL1	YJR005W	SDH6	Q3E785	79 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YOR008C-A	Q3E7B9	74 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YMR001C-A	Q8TGS9	76 aa		0.77	□□□□□ -2.29
APL1	YJR005W	YGL014C-A	P0C5N1	53 aa		0.76	□□□□□ -2.29
APL1	YJR005W	RPL33B	P41056	107 aa	Known RBP	0.76	□□□□□ -2.29
APL1	YJR005W	YAL067W-A	Q8TGK6	75 aa		0.76	□□□□□ -2.29
APL1	YJR005W	FLO1	P32768	1537 aa		0.76	□□□□□ -2.29
APL1	YJR005W	YPR010C-A	A5Z2X5	72 aa		0.76	□□□□□ -2.29
APL1	YJR005W	YJL027C	P47063	138 aa	Predicted RBP	0.76	□□□□□ -2.29
APL1	YJR005W	YFR009W-A	P0C5M9	85 aa		0.75	□□□□□ -2.29
APL1	YJR005W	YBR201C-A	Q2V2Q3	67 aa		0.75	□□□□□ -2.29
APL1	YJR005W	YGL258W-A	Q3E740	77 aa		0.75	□□□□□ -2.29
APL1	YJR005W	YMR122W-A	Q3E842	84 aa		0.75	□□□□□ -2.29
APL1	YJR005W	Q0032	Q9ZZX7	96 aa		0.75	□□□□□ -2.29
APL1	YJR005W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.74	□□□□□ -2.29
APL1	YJR005W	YEL008W	P40001	126 aa		0.74	□□□□□ -2.29
APL1	YJR005W	MVB12	P42939	101 aa		0.74	□□□□□ -2.29
APL1	YJR005W	YDR210W	Q03482	75 aa		0.74	□□□□□ -2.29
APL1	YJR005W	YDR114C	Q04597	100 aa		0.74	□□□□□ -2.29
APL1	YJR005W	YGL041C-B	Q3E750	60 aa		0.74	□□□□□ -2.29
APL1	YJR005W	YLR342W-A	Q3E810	57 aa		0.74	□□□□□ -2.29
APL1	YJR005W	BLM10	P43583	2143 aa		0.74	□□□□□ -2.29
APL1	YJR005W	ACC1	Q00955	2233 aa	Known RBP	0.74	□□□□□ -2.29
APL1	YJR005W	RPL33A	P05744	107 aa	Known RBP	0.74	□□□□□ -2.29
APL1	YJR005W	YBL039W-B	P0C268	59 aa		0.74	□□□□□ -2.29
APL1	YJR005W	TAR1	Q8TGM6	124 aa		0.74	□□□□□ -2.29
APL1	YJR005W	YLR255C	O13574	117 aa		0.73	□□□□□ -2.29
APL1	YJR005W	YER084W	P40057	128 aa		0.73	□□□□□ -2.29
APL1	YJR005W	YJR146W	P47174	117 aa		0.73	□□□□□ -2.29
APL1	YJR005W	VAM10	Q08474	114 aa		0.73	□□□□□ -2.29
APL1	YJR005W	SEN1	Q00416	2231 aa	Known RBP	0.73	□□□□□ -2.29
APL1	YJR005W	YJL144W	P47009	104 aa		0.73	□□□□□ -2.29
APL1	YJR005W	YOR072W	Q08486	104 aa		0.73	□□□□□ -2.29
APL1	YJR005W	YLL006W-A	Q3E814	58 aa		0.73	□□□□□ -2.29
APL1	YJR005W	BEM2	P39960	2167 aa	Known RBP	0.72	□□□□□ -2.29
APL1	YJR005W	YGR025W	P53216	100 aa		0.72	□□□□□ -2.29
APL1	YJR005W	YGR240C-A	Q3E786	66 aa		0.72	□□□□□ -2.29
APL1	YJR005W	YJL133C-A	Q3E7A3	74 aa		0.72	□□□□□ -2.29
APL1	YJR005W	YOL097W-A	Q3E7Y9	61 aa		0.72	□□□□□ -2.29
APL1	YJR005W	YHR213W-B	Q8TGK1	99 aa		0.72	□□□□□ -2.29
APL1	YJR005W	AUA1	P32450	94 aa		0.71	□□□□□ -2.3
APL1	YJR005W	SIP18	P50263	79 aa		0.71	□□□□□ -2.3
APL1	YJR005W	YHR007C-A	Q07074	71 aa		0.71	□□□□□ -2.3
APL1	YJR005W	YBR200W-A	Q3E755	54 aa		0.71	□□□□□ -2.3
APL1	YJR005W	YPR117W	Q06116	2489 aa		0.71	□□□□□ -2.3
APL1	YJR005W	YCL042W	P25572	119 aa		0.71	□□□□□ -2.3
APL1	YJR005W	YJR128W	P47162	119 aa		0.71	□□□□□ -2.3
APL1	YJR005W	LCL1	Q02786	101 aa		0.71	□□□□□ -2.3
APL1	YJR005W	NCE101	Q02820	53 aa		0.71	□□□□□ -2.3
APL1	YJR005W	YOR011W-A	Q3E807	68 aa		0.71	□□□□□ -2.3
APL1	YJR005W	NUM1	Q00402	2748 aa		0.7	□□□□□ -2.3
APL1	YJR005W	SEC16	P48415	2195 aa	Known RBP	0.7	□□□□□ -2.3
APL1	YJR005W	YAR064W	P39563	99 aa		0.7	□□□□□ -2.3
APL1	YJR005W	YIL086C	P40503	102 aa		0.7	□□□□□ -2.3
APL1	YJR005W	RPL43A	P0CX25	92 aa	Known RBP	0.7	□□□□□ -2.3
APL1	YJR005W	RPL43B	P0CX26	92 aa		0.7	□□□□□ -2.3
APL1	YJR005W	COX7	P10174	60 aa		0.7	□□□□□ -2.3
APL1	YJR005W	YJL127C-B	Q3E828	52 aa		0.7	□□□□□ -2.3
APL1	YJR005W	YBL044W	P38194	122 aa		0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 281 ms