RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C LIP1Q03579 150 aa2.25□□□□□ -2.05
RPN1YHR027C MRPL38P35996 138 aaPredicted RBP2.25□□□□□ -2.05
RPN1YHR027C YPR010C-AA5Z2X5 72 aa2.25□□□□□ -2.05
RPN1YHR027C YIL086CP40503 102 aa2.25□□□□□ -2.05
RPN1YHR027C FYV12Q08559 129 aa2.25□□□□□ -2.05
RPN1YHR027C YDR010CQ12426 110 aa2.25□□□□□ -2.05
RPN1YHR027C YFR032C-BQ8TGU2 87 aa2.25□□□□□ -2.05
RPN1YHR027C YPR013CQ12145 317 aa2.24□□□□□ -2.05
RPN1YHR027C YDR524C-BQ3E6R4 66 aa2.24□□□□□ -2.05
RPN1YHR027C YMR122W-AQ3E842 84 aa2.24□□□□□ -2.05
RPN1YHR027C YBR219CP38317 127 aa2.24□□□□□ -2.05
RPN1YHR027C COX23P38824 151 aa2.24□□□□□ -2.05
RPN1YHR027C YGL149WP53116 101 aa2.24□□□□□ -2.05
RPN1YHR027C TMC1Q08422 150 aaPredicted RBP2.24□□□□□ -2.05
RPN1YHR027C CCW12Q12127 133 aa2.24□□□□□ -2.05
RPN1YHR027C YNL042W-BQ3E7Z2 85 aa2.24□□□□□ -2.05
RPN1YHR027C YCR095W-AQ3E787 52 aa2.23□□□□□ -2.05
RPN1YHR027C POR2P40478 281 aa2.23□□□□□ -2.05
RPN1YHR027C WWM1P43582 211 aaKnown RBP2.23□□□□□ -2.05
RPN1YHR027C MRX7P53869 86 aa2.23□□□□□ -2.05
RPN1YHR027C MRPS8Q03799 155 aa2.23□□□□□ -2.05
RPN1YHR027C SOM1Q05676 74 aa2.23□□□□□ -2.05
RPN1YHR027C SPC1P46965 94 aa2.22□□□□□ -2.05
RPN1YHR027C YKL097CP34245 136 aa2.22□□□□□ -2.05
RPN1YHR027C YIL102CP40488 101 aa2.22□□□□□ -2.05
RPN1YHR027C VAM10Q08474 114 aa2.22□□□□□ -2.05
RPN1YHR027C HUB1Q6Q546 73 aa2.22□□□□□ -2.05
RPN1YHR027C YOL013W-AP0C272 63 aaPredicted RBP2.22□□□□□ -2.05
RPN1YHR027C YJL197C-AP0C5P0 93 aa2.22□□□□□ -2.05
RPN1YHR027C BPH1P25356 2167 aa2.21□□□□□ -2.06
RPN1YHR027C RPL29P05747 59 aaPredicted RBP2.21□□□□□ -2.06
RPN1YHR027C AQY2P0CD90 149 aa2.21□□□□□ -2.06
RPN1YHR027C YCR001WP25347 104 aa2.21□□□□□ -2.06
RPN1YHR027C RPL39P04650 51 aa2.2□□□□□ -2.06
RPN1YHR027C ATP17Q06405 101 aa2.2□□□□□ -2.06
RPN1YHR027C EDC2P40023 145 aaPredicted RBP2.2□□□□□ -2.06
RPN1YHR027C BSC4P53841 131 aa2.2□□□□□ -2.06
RPN1YHR027C LEE1Q02799 301 aaKnown RBP2.2□□□□□ -2.06
RPN1YHR027C YMR001C-AQ8TGS9 76 aa2.19□□□□□ -2.06
RPN1YHR027C YLR157W-DP0CE99 70 aa2.19□□□□□ -2.06
RPN1YHR027C SDH6Q3E785 79 aa2.19□□□□□ -2.06
RPN1YHR027C FAB1P34756 2278 aa2.19□□□□□ -2.06
RPN1YHR027C YHR213W-BQ8TGK1 99 aa2.19□□□□□ -2.06
RPN1YHR027C YNL146C-AQ3E7Z1 64 aa2.18□□□□□ -2.06
RPN1YHR027C YHR125WP38831 101 aa2.17□□□□□ -2.06
RPN1YHR027C YNL162W-AQ3E7A8 72 aa2.17□□□□□ -2.06
RPN1YHR027C RTC6O14464 93 aa2.17□□□□□ -2.06
RPN1YHR027C YBR027CP38220 110 aa2.17□□□□□ -2.06
RPN1YHR027C YJL133C-AQ3E7A3 74 aa2.17□□□□□ -2.06
RPN1YHR027C YAR023CD6VPM8 179 aa2.16□□□□□ -2.06
RPN1YHR027C PMP3P87284 55 aa2.16□□□□□ -2.06
RPN1YHR027C LCL2Q08045 131 aa2.16□□□□□ -2.06
RPN1YHR027C SNA2P56508 79 aa2.16□□□□□ -2.06
RPN1YHR027C ECM19Q06011 112 aa2.16□□□□□ -2.06
RPN1YHR027C YBR230W-AQ3E762 66 aa2.15□□□□□ -2.07
RPN1YHR027C YOR011W-AQ3E807 68 aa2.15□□□□□ -2.07
RPN1YHR027C YBL008W-AQ3E821 79 aa2.15□□□□□ -2.07
RPN1YHR027C MRP10O75012 95 aa2.15□□□□□ -2.07
RPN1YHR027C MVB12P42939 101 aa2.14□□□□□ -2.07
RPN1YHR027C AUA1P32450 94 aa2.14□□□□□ -2.07
RPN1YHR027C YBR182C-AQ8TGU6 64 aa2.14□□□□□ -2.07
RPN1YHR027C YDL241WQ07738 123 aa2.13□□□□□ -2.07
RPN1YHR027C YNL122CP53921 115 aaPredicted RBP2.13□□□□□ -2.07
RPN1YHR027C YPL278CQ08990 100 aa2.13□□□□□ -2.07
RPN1YHR027C IGD1P43598 195 aa2.13□□□□□ -2.07
RPN1YHR027C YLR307C-AQ3E825 87 aa2.13□□□□□ -2.07
RPN1YHR027C YJL127C-BQ3E828 52 aa2.12□□□□□ -2.07
RPN1YHR027C YGL014C-AP0C5N1 53 aa2.11□□□□□ -2.07
RPN1YHR027C YCL048W-AQ2V2Q2 79 aa2.11□□□□□ -2.07
RPN1YHR027C YAR064WP39563 99 aa2.1□□□□□ -2.07
RPN1YHR027C Q0032Q9ZZX7 96 aa2.1□□□□□ -2.07
RPN1YHR027C YBL039W-BP0C268 59 aa2.1□□□□□ -2.07
RPN1YHR027C DDR2P89113 61 aa2.09□□□□□ -2.07
RPN1YHR027C HOR7Q05827 59 aa2.09□□□□□ -2.07
RPN1YHR027C YDR210WQ03482 75 aa2.09□□□□□ -2.08
RPN1YHR027C YDL012CQ12489 107 aa2.09□□□□□ -2.08
RPN1YHR027C RPC10P40422 70 aa2.08□□□□□ -2.08
RPN1YHR027C SGF11Q03067 99 aa2.07□□□□□ -2.08
RPN1YHR027C RDS3Q06835 107 aaPredicted RBP2.07□□□□□ -2.08
RPN1YHR027C TAR1Q8TGM6 124 aa2.07□□□□□ -2.08
RPN1YHR027C YER175W-AQ8TGU4 54 aa2.06□□□□□ -2.08
RPN1YHR027C YCR041WP37265 110 aa2.05□□□□□ -2.08
RPN1YHR027C YHR007C-AQ07074 71 aa2.04□□□□□ -2.08
RPN1YHR027C YER078W-AQ3E7A2 54 aa2.04□□□□□ -2.08
RPN1YHR027C YCL042WP25572 119 aa2.03□□□□□ -2.08
RPN1YHR027C YGR240C-AQ3E786 66 aa2.03□□□□□ -2.08
RPN1YHR027C YOR072WQ08486 104 aa2.03□□□□□ -2.08
RPN1YHR027C COX8P04039 78 aa2.02□□□□□ -2.09
RPN1YHR027C GIS2P53849 153 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09 RIP-Chip
RPN1YHR027C YLR255CO13574 117 aa2.02□□□□□ -2.09
RPN1YHR027C URA2P07259 2214 aaKnown RBP2.02□□□□□ -2.09
RPN1YHR027C CMC4Q3E7A9 73 aa2.01□□□□□ -2.09
RPN1YHR027C YOL097W-AQ3E7Y9 61 aa2.01□□□□□ -2.09
RPN1YHR027C YJR128WP47162 119 aa2.01□□□□□ -2.09
RPN1YHR027C HFA1P32874 2273 aa2.01□□□□□ -2.09
RPN1YHR027C YBR201C-AQ2V2Q3 67 aa2□□□□□ -2.09
RPN1YHR027C RPL33AP05744 107 aaKnown RBP2□□□□□ -2.09
RPN1YHR027C YEL014CP39999 101 aa2□□□□□ -2.09
RPN1YHR027C RPL33BP41056 107 aaKnown RBP2□□□□□ -2.09
RPN1YHR027C YDR034W-BQ6Q5X2 51 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms