RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A PDR12Q02785 1511 aa1.4□□□□□ -2.18
EFG1YGR271C-A TY4B-HP0C2J7 1802 aa1.4□□□□□ -2.18
EFG1YGR271C-A AUA1P32450 94 aa1.4□□□□□ -2.19
EFG1YGR271C-A TY1B-DR4Q07793 1604 aa1.4□□□□□ -2.19
EFG1YGR271C-A YDR246W-AQ3E763 66 aa1.39□□□□□ -2.19
EFG1YGR271C-A HFA1P32874 2273 aa1.38□□□□□ -2.19
EFG1YGR271C-A RPL37AP49166 88 aaKnown RBP1.38□□□□□ -2.19
EFG1YGR271C-A YNL190WP53872 204 aa1.38□□□□□ -2.19
EFG1YGR271C-A YPR108W-AQ3E7B3 70 aa1.38□□□□□ -2.19
EFG1YGR271C-A TY2B-LR1P0C2J3 1770 aa1.36□□□□□ -2.19
EFG1YGR271C-A TY2B-FP0CX63 1770 aa1.36□□□□□ -2.19
EFG1YGR271C-A TY2B-GR2P0CX64 1770 aa1.36□□□□□ -2.19
EFG1YGR271C-A TY2B-DR2Q03494 1770 aa1.36□□□□□ -2.19
EFG1YGR271C-A TY2B-OR1Q12113 1770 aa1.36□□□□□ -2.19
EFG1YGR271C-A TY2B-BQ12491 1770 aa1.36□□□□□ -2.19
EFG1YGR271C-A TY2B-OR2Q12501 1770 aa1.36□□□□□ -2.19
EFG1YGR271C-A PDR5P33302 1511 aaKnown RBP1.36□□□□□ -2.19
EFG1YGR271C-A YJR107C-AP0CT86 78 aa1.36□□□□□ -2.19
EFG1YGR271C-A YDR182W-AQ3E796 67 aa1.36□□□□□ -2.19
EFG1YGR271C-A HUB1Q6Q546 73 aa1.36□□□□□ -2.19
EFG1YGR271C-A TY2B-DR3Q07791 1770 aaKnown RBP1.36□□□□□ -2.19
EFG1YGR271C-A FKS3Q04952 1785 aa1.35□□□□□ -2.19
EFG1YGR271C-A TY1B-BLQ12490 1755 aa1.35□□□□□ -2.19
EFG1YGR271C-A YBR032WP38223 100 aa1.35□□□□□ -2.19
EFG1YGR271C-A DNF2Q12675 1612 aa1.35□□□□□ -2.19
EFG1YGR271C-A STT4P37297 1900 aa1.34□□□□□ -2.19
EFG1YGR271C-A TY1B-JR2P47100 1755 aaKnown RBP1.34□□□□□ -2.19
EFG1YGR271C-A TY1B-ER2Q03619 1755 aa1.34□□□□□ -2.19
EFG1YGR271C-A TY1B-MR2Q04670 1755 aaKnown RBP1.34□□□□□ -2.19
EFG1YGR271C-A TY1B-LR1Q12088 1755 aaKnown RBP1.34□□□□□ -2.19
EFG1YGR271C-A MON2P48563 1636 aaPredicted RBP1.34□□□□□ -2.19
EFG1YGR271C-A YLR307C-AQ3E825 87 aa1.34□□□□□ -2.19
EFG1YGR271C-A TY1B-MR1Q04214 1755 aa1.34□□□□□ -2.2
EFG1YGR271C-A TY1B-NL1Q12112 1755 aa1.34□□□□□ -2.2
EFG1YGR271C-A TY1B-GR1Q12141 1755 aa1.34□□□□□ -2.2
EFG1YGR271C-A ARO1P08566 1588 aaKnown RBP1.34□□□□□ -2.2
EFG1YGR271C-A MMS1Q06211 1407 aa1.33□□□□□ -2.2
EFG1YGR271C-A YLR157W-EP0CF00 54 aa1.33□□□□□ -2.2
EFG1YGR271C-A RPS30AP0CX33 63 aaKnown RBP1.33□□□□□ -2.2
EFG1YGR271C-A RPS30BP0CX34 63 aaKnown RBP1.33□□□□□ -2.2
EFG1YGR271C-A YLR146W-AQ2V2P1 62 aa1.33□□□□□ -2.2
EFG1YGR271C-A TY3B-GQ99315 1547 aa1.33□□□□□ -2.2
EFG1YGR271C-A BCK1Q01389 1478 aa1.32□□□□□ -2.2
EFG1YGR271C-A RIM15P43565 1770 aa1.32□□□□□ -2.2
EFG1YGR271C-A SNQ2P32568 1501 aaKnown RBP1.31□□□□□ -2.2
EFG1YGR271C-A YCF1P39109 1515 aaKnown RBP1.31□□□□□ -2.2
EFG1YGR271C-A POL2P21951 2222 aaKnown RBP1.31□□□□□ -2.2
EFG1YGR271C-A APC1P53886 1748 aa1.31□□□□□ -2.2
EFG1YGR271C-A YOL164W-AQ3E7A5 60 aa1.3□□□□□ -2.2
EFG1YGR271C-A SPT6P23615 1451 aaKnown RBP1.3□□□□□ -2.2
EFG1YGR271C-A EDC1P53080 175 aaPredicted RBP1.29□□□□□ -2.2
EFG1YGR271C-A YKL023C-AQ2V2P3 75 aa1.29□□□□□ -2.2
EFG1YGR271C-A YBL039W-BP0C268 59 aa1.28□□□□□ -2.2
EFG1YGR271C-A RPL37BP51402 88 aaKnown RBP1.28□□□□□ -2.2
EFG1YGR271C-A VTH1P40438 1549 aa1.28□□□□□ -2.2
EFG1YGR271C-A VTH2P40890 1549 aa1.28□□□□□ -2.2
EFG1YGR271C-A RPO21P04050 1733 aaKnown RBP1.27□□□□□ -2.21
EFG1YGR271C-A SPO14P36126 1683 aa1.27□□□□□ -2.21
EFG1YGR271C-A CDC25P04821 1589 aa1.27□□□□□ -2.21
EFG1YGR271C-A YBR200W-AQ3E755 54 aa1.26□□□□□ -2.21
EFG1YGR271C-A HAP1P0CE41 1502 aa1.25□□□□□ -2.21
EFG1YGR271C-A YOR011W-AQ3E807 68 aa1.25□□□□□ -2.21
EFG1YGR271C-A YOL166W-AQ8TGJ1 51 aa1.25□□□□□ -2.21
EFG1YGR271C-A VMR1P38735 1592 aa1.25□□□□□ -2.21
EFG1YGR271C-A BPH1P25356 2167 aa1.24□□□□□ -2.21
EFG1YGR271C-A BLM10P43583 2143 aa1.24□□□□□ -2.21
EFG1YGR271C-A KOG1P38873 1557 aa1.23□□□□□ -2.21
EFG1YGR271C-A OLI1P61829 76 aa1.23□□□□□ -2.21
EFG1YGR271C-A HKR1P41809 1802 aa1.23□□□□□ -2.21
EFG1YGR271C-A URA2P07259 2214 aaKnown RBP1.23□□□□□ -2.21
EFG1YGR271C-A YOR394C-AQ8TGJ0 55 aa1.22□□□□□ -2.21
EFG1YGR271C-A YMR001C-AQ8TGS9 76 aa1.22□□□□□ -2.21
EFG1YGR271C-A PDR15Q04182 1529 aaKnown RBP1.2□□□□□ -2.22
EFG1YGR271C-A YFR009W-AP0C5M9 85 aa1.2□□□□□ -2.22
EFG1YGR271C-A YLR157W-DP0CE99 70 aa1.2□□□□□ -2.22
EFG1YGR271C-A SSK2P53599 1579 aa1.2□□□□□ -2.22
EFG1YGR271C-A RPS27AP35997 82 aaKnown RBP1.19□□□□□ -2.22
EFG1YGR271C-A YBR016WP38216 128 aa1.19□□□□□ -2.22
EFG1YGR271C-A IRC20Q06554 1556 aa1.18□□□□□ -2.22
EFG1YGR271C-A YOR192C-CQ3E736 78 aa1.18□□□□□ -2.22
EFG1YGR271C-A YBT1P32386 1661 aa1.18□□□□□ -2.22
EFG1YGR271C-A SNF2P22082 1703 aa1.16□□□□□ -2.22
EFG1YGR271C-A YOR093CQ12275 1648 aa1.15□□□□□ -2.22
EFG1YGR271C-A PEP1P32319 1579 aa1.15□□□□□ -2.23
EFG1YGR271C-A YGR025WP53216 100 aa1.14□□□□□ -2.23
EFG1YGR271C-A ULS1Q08562 1619 aa1.14□□□□□ -2.23
EFG1YGR271C-A YBL044WP38194 122 aa1.12□□□□□ -2.23
EFG1YGR271C-A NUP188P52593 1655 aaKnown RBP1.12□□□□□ -2.23
EFG1YGR271C-A RPS29BP41058 56 aaKnown RBP1.11□□□□□ -2.23
EFG1YGR271C-A YBR230W-AQ3E762 66 aa1.11□□□□□ -2.23
EFG1YGR271C-A SIP18P50263 79 aa1.1□□□□□ -2.23
EFG1YGR271C-A USO1P25386 1790 aa1.06□□□□□ -2.24
EFG1YGR271C-A RPS27BP38711 82 aa1.05□□□□□ -2.24
EFG1YGR271C-A RKR1Q04781 1562 aa1.04□□□□□ -2.24
EFG1YGR271C-A THO2P53552 1597 aaKnown RBP1.04□□□□□ -2.24
EFG1YGR271C-A NUP192P47054 1683 aa1.04□□□□□ -2.24
EFG1YGR271C-A YOR008C-AQ3E7B9 74 aa1.03□□□□□ -2.24
EFG1YGR271C-A YPR010C-AA5Z2X5 72 aa1.02□□□□□ -2.25
EFG1YGR271C-A YGR146C-AQ8TGT9 53 aa1□□□□□ -2.25
EFG1YGR271C-A STU1P38198 1513 aa0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms