RNA–Protein interactions for RNA: YER098W

UBP9, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeastyeast

Gene UBP9, Length 2,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP9YER098W YLR162WQ06235 118 aa3.69□□□□□ -1.82
UBP9YER098W YOR314WQ12506 109 aa3.69□□□□□ -1.82
UBP9YER098W IRA1P18963 3092 aa3.69□□□□□ -1.82
UBP9YER098W YIR020CP40575 100 aa3.69□□□□□ -1.82
UBP9YER098W SMD1Q02260 146 aaPredicted RBP3.69□□□□□ -1.82
UBP9YER098W YFR009W-AP0C5M9 85 aa3.68□□□□□ -1.82
UBP9YER098W YHL037CP38733 133 aa3.68□□□□□ -1.82
UBP9YER098W YLL006W-AQ3E814 58 aa3.68□□□□□ -1.82
UBP9YER098W TDA2P40045 126 aa3.68□□□□□ -1.82
UBP9YER098W SED1Q01589 338 aa3.68□□□□□ -1.82
UBP9YER098W YOR020W-AQ3E824 90 aa3.68□□□□□ -1.82
UBP9YER098W YOL166W-AQ8TGJ1 51 aa3.68□□□□□ -1.82
UBP9YER098W RPS30AP0CX33 63 aaKnown RBP3.67□□□□□ -1.82
UBP9YER098W RPS30BP0CX34 63 aaKnown RBP3.67□□□□□ -1.82
UBP9YER098W YEL045CP32616 141 aa3.67□□□□□ -1.82
UBP9YER098W YBR219CP38317 127 aa3.67□□□□□ -1.82
UBP9YER098W YER135CP40082 130 aa3.67□□□□□ -1.82
UBP9YER098W YPR013CQ12145 317 aa3.67□□□□□ -1.82
UBP9YER098W YCL048W-AQ2V2Q2 79 aa3.67□□□□□ -1.82
UBP9YER098W RPL36BO14455 100 aaKnown RBP3.66□□□□□ -1.82
UBP9YER098W RPL36AP05745 100 aaPredicted RBP3.66□□□□□ -1.82
UBP9YER098W YMR122CQ03879 124 aa3.66□□□□□ -1.82
UBP9YER098W TMC1Q08422 150 aaPredicted RBP3.66□□□□□ -1.82
UBP9YER098W CCW12Q12127 133 aa3.66□□□□□ -1.82
UBP9YER098W YGR035W-AQ45U48 73 aa3.65□□□□□ -1.83
UBP9YER098W VAM10Q08474 114 aa3.64□□□□□ -1.83
UBP9YER098W YDR182W-AQ3E796 67 aa3.64□□□□□ -1.83
UBP9YER098W OST5Q92316 86 aa3.64□□□□□ -1.83
UBP9YER098W YOL014WQ08110 124 aa3.63□□□□□ -1.83
UBP9YER098W YER188C-AP0C0V2 99 aa3.63□□□□□ -1.83
UBP9YER098W YIL102CP40488 101 aa3.63□□□□□ -1.83
UBP9YER098W YPR153WQ06537 140 aa3.62□□□□□ -1.83
UBP9YER098W TSC3Q3E790 80 aa3.62□□□□□ -1.83
UBP9YER098W PMP3P87284 55 aa3.61□□□□□ -1.83
UBP9YER098W YMR122W-AQ3E842 84 aa3.61□□□□□ -1.83
UBP9YER098W YNL146C-AQ3E7Z1 64 aa3.61□□□□□ -1.83
UBP9YER098W TRA1P38811 3744 aa3.59□□□□□ -1.83
UBP9YER098W YKL065W-AQ2V2P2 73 aa3.59□□□□□ -1.83
UBP9YER098W LIP1Q03579 150 aa3.59□□□□□ -1.84
UBP9YER098W YDR010CQ12426 110 aa3.59□□□□□ -1.84
UBP9YER098W YML100W-AQ8TGT0 57 aa3.59□□□□□ -1.84
UBP9YER098W YPR010C-AA5Z2X5 72 aa3.58□□□□□ -1.84
UBP9YER098W RPS11AP0CX47 156 aaKnown RBP3.58□□□□□ -1.84
UBP9YER098W RPS11BP0CX48 156 aaKnown RBP3.58□□□□□ -1.84
UBP9YER098W YFR032C-BQ8TGU2 87 aa3.58□□□□□ -1.84
UBP9YER098W YAL064WP39711 94 aa3.56□□□□□ -1.84
UBP9YER098W SPC1P46965 94 aa3.56□□□□□ -1.84
UBP9YER098W MRPS8Q03799 155 aa3.56□□□□□ -1.84
UBP9YER098W YHR213W-BQ8TGK1 99 aa3.55□□□□□ -1.84
UBP9YER098W FMP27Q06179 2628 aa3.54□□□□□ -1.84
UBP9YER098W COX23P38824 151 aa3.54□□□□□ -1.84
UBP9YER098W YIL156W-BQ2V2P4 73 aa3.54□□□□□ -1.84
UBP9YER098W MVB12P42939 101 aa3.53□□□□□ -1.84
UBP9YER098W YJL133C-AQ3E7A3 74 aa3.53□□□□□ -1.85
UBP9YER098W RPL29P05747 59 aaPredicted RBP3.52□□□□□ -1.85
UBP9YER098W YHR125WP38831 101 aa3.52□□□□□ -1.85
UBP9YER098W YCR095W-AQ3E787 52 aa3.52□□□□□ -1.85
UBP9YER098W TAR1Q8TGM6 124 aa3.52□□□□□ -1.85
UBP9YER098W YAR023CD6VPM8 179 aa3.51□□□□□ -1.85
UBP9YER098W FYV5P25585 152 aa3.51□□□□□ -1.85
UBP9YER098W YJL127C-BQ3E828 52 aa3.5□□□□□ -1.85
UBP9YER098W GCN1P33892 2672 aaKnown RBP3.5□□□□□ -1.85
UBP9YER098W YOL013W-AP0C272 63 aaPredicted RBP3.5□□□□□ -1.85
UBP9YER098W DDR48P18899 430 aaKnown RBP3.5□□□□□ -1.85
UBP9YER098W YHR032W-AP0C5N6 59 aa3.49□□□□□ -1.85
UBP9YER098W YLR157W-DP0CE99 70 aa3.49□□□□□ -1.85
UBP9YER098W YBR230W-AQ3E762 66 aa3.49□□□□□ -1.85
UBP9YER098W HOR7Q05827 59 aa3.48□□□□□ -1.85
UBP9YER098W AQY2P0CD90 149 aa3.47□□□□□ -1.85
UBP9YER098W YNL042W-BQ3E7Z2 85 aa3.47□□□□□ -1.85
UBP9YER098W YGL193CP53097 103 aa3.47□□□□□ -1.85
UBP9YER098W HUB1Q6Q546 73 aa3.47□□□□□ -1.85
UBP9YER098W YMR001C-AQ8TGS9 76 aa3.47□□□□□ -1.85
UBP9YER098W SDH6Q3E785 79 aa3.46□□□□□ -1.85
UBP9YER098W YBL039W-BP0C268 59 aa3.45□□□□□ -1.86
UBP9YER098W YCR001WP25347 104 aa3.45□□□□□ -1.86
UBP9YER098W YDL241WQ07738 123 aa3.44□□□□□ -1.86
UBP9YER098W YDR034W-BQ6Q5X2 51 aa3.44□□□□□ -1.86
UBP9YER098W SPG1P50088 95 aa3.43□□□□□ -1.86
UBP9YER098W AUA1P32450 94 aa3.42□□□□□ -1.86
UBP9YER098W RPC10P40422 70 aa3.42□□□□□ -1.86
UBP9YER098W YHR007C-AQ07074 71 aa3.41□□□□□ -1.86
UBP9YER098W PRP8P33334 2413 aaKnown RBP3.41□□□□□ -1.86
UBP9YER098W YAR064WP39563 99 aa3.41□□□□□ -1.86
UBP9YER098W LCL2Q08045 131 aa3.41□□□□□ -1.86
UBP9YER098W YPR117WQ06116 2489 aa3.4□□□□□ -1.86
UBP9YER098W YBR027CP38220 110 aa3.4□□□□□ -1.87
UBP9YER098W BSC4P53841 131 aa3.4□□□□□ -1.87
UBP9YER098W YNL122CP53921 115 aaPredicted RBP3.39□□□□□ -1.87
UBP9YER098W YLR307C-AQ3E825 87 aa3.39□□□□□ -1.87
UBP9YER098W YGR240C-AQ3E786 66 aa3.39□□□□□ -1.87
UBP9YER098W Q0032Q9ZZX7 96 aa3.38□□□□□ -1.87
UBP9YER098W QCR10P37299 77 aa3.37□□□□□ -1.87
UBP9YER098W ATP17Q06405 101 aa3.37□□□□□ -1.87
UBP9YER098W YGL149WP53116 101 aa3.37□□□□□ -1.87
UBP9YER098W MRX7P53869 86 aa3.37□□□□□ -1.87
UBP9YER098W RDS3Q06835 107 aaPredicted RBP3.36□□□□□ -1.87
UBP9YER098W YOR072WQ08486 104 aa3.35□□□□□ -1.87
UBP9YER098W UTP20P35194 2493 aaKnown RBP3.35□□□□□ -1.87
UBP9YER098W SNA2P56508 79 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms