RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A YCR050CP25630 102 aa2.03□□□□□ -2.08
RIM1YCR028C-A SPT4P32914 102 aaPredicted RBP2.03□□□□□ -2.08
RIM1YCR028C-A GAT4P40569 121 aa2.03□□□□□ -2.08
RIM1YCR028C-A SBH1P52870 82 aa2.03□□□□□ -2.08
RIM1YCR028C-A SGF11Q03067 99 aa2.03□□□□□ -2.08
RIM1YCR028C-A RDS3Q06835 107 aaPredicted RBP2.03□□□□□ -2.08
RIM1YCR028C-A YOR314WQ12506 109 aa2.03□□□□□ -2.08
RIM1YCR028C-A YFR009W-AP0C5M9 85 aa2.02□□□□□ -2.09
RIM1YCR028C-A YER039C-AP0CD97 72 aa2.02□□□□□ -2.09
RIM1YCR028C-A UBC4P15731 148 aa2.02□□□□□ -2.09
RIM1YCR028C-A AIM4P38305 123 aaPredicted RBP2.02□□□□□ -2.09
RIM1YCR028C-A RSM18P40033 138 aa2.02□□□□□ -2.09
RIM1YCR028C-A SPC1P46965 94 aa2.02□□□□□ -2.09
RIM1YCR028C-A ATP20Q12233 115 aa2.02□□□□□ -2.09
RIM1YCR028C-A KTI11Q3E840 82 aa2.02□□□□□ -2.09
RIM1YCR028C-A SEN1Q00416 2231 aaKnown RBP2.01□□□□□ -2.09
RIM1YCR028C-A RPL33AP05744 107 aaKnown RBP2.01□□□□□ -2.09
RIM1YCR028C-A BET1P22804 142 aa2.01□□□□□ -2.09
RIM1YCR028C-A FYV5P25585 152 aa2.01□□□□□ -2.09
RIM1YCR028C-A YAL064WP39711 94 aa2.01□□□□□ -2.09
RIM1YCR028C-A RPL33BP41056 107 aaKnown RBP2.01□□□□□ -2.09
RIM1YCR028C-A YMR320WQ04897 101 aa2.01□□□□□ -2.09
RIM1YCR028C-A COX23P38824 151 aa2□□□□□ -2.09
RIM1YCR028C-A ICS3P47034 131 aa2□□□□□ -2.09
RIM1YCR028C-A EDC1P53080 175 aaPredicted RBP2□□□□□ -2.09
RIM1YCR028C-A YJL127C-BQ3E828 52 aa2□□□□□ -2.09
RIM1YCR028C-A YGR035W-AQ45U48 73 aa2□□□□□ -2.09
RIM1YCR028C-A YBR121C-AP0C5L4 52 aa1.99□□□□□ -2.09
RIM1YCR028C-A YGL041C-BQ3E750 60 aa1.99□□□□□ -2.09
RIM1YCR028C-A YBR230W-AQ3E762 66 aa1.99□□□□□ -2.09
RIM1YCR028C-A YDR182W-AQ3E796 67 aa1.99□□□□□ -2.09
RIM1YCR028C-A YNL042W-BQ3E7Z2 85 aa1.99□□□□□ -2.09
RIM1YCR028C-A Q0032Q9ZZX7 96 aa1.99□□□□□ -2.09
RIM1YCR028C-A YBR056W-AI2HB52 66 aa1.98□□□□□ -2.09
RIM1YCR028C-A RPL36BO14455 100 aaKnown RBP1.98□□□□□ -2.09
RIM1YCR028C-A RTC6O14464 93 aa1.98□□□□□ -2.09
RIM1YCR028C-A RPL36AP05745 100 aaPredicted RBP1.98□□□□□ -2.09
RIM1YCR028C-A RPL43AP0CX25 92 aaKnown RBP1.98□□□□□ -2.09
RIM1YCR028C-A RPL43BP0CX26 92 aa1.98□□□□□ -2.09
RIM1YCR028C-A YLR412C-AQ3E742 68 aa1.98□□□□□ -2.09
RIM1YCR028C-A YDR246W-AQ3E763 66 aa1.98□□□□□ -2.09
RIM1YCR028C-A YHR213W-BQ8TGK1 99 aa1.98□□□□□ -2.09
RIM1YCR028C-A HFA1P32874 2273 aa1.98□□□□□ -2.09
RIM1YCR028C-A YAR023CD6VPM8 179 aa1.97□□□□□ -2.09
RIM1YCR028C-A RPS28BP0C0X0 67 aaKnown RBP1.97□□□□□ -2.09
RIM1YCR028C-A YGR164WP53291 111 aa1.97□□□□□ -2.09
RIM1YCR028C-A SNA2P56508 79 aa1.97□□□□□ -2.09
RIM1YCR028C-A YJL133C-AQ3E7A3 74 aa1.97□□□□□ -2.09
RIM1YCR028C-A RPS28AQ3E7X9 67 aaPredicted RBP1.97□□□□□ -2.09
RIM1YCR028C-A NOP10Q6Q547 58 aaPredicted RBP1.97□□□□□ -2.09
RIM1YCR028C-A YPR117WQ06116 2489 aa1.97□□□□□ -2.09
RIM1YCR028C-A CSF1Q12150 2958 aa1.96□□□□□ -2.1
RIM1YCR028C-A YLR307C-AQ3E825 87 aa1.96□□□□□ -2.1
RIM1YCR028C-A FMP27Q06179 2628 aa1.95□□□□□ -2.1
RIM1YCR028C-A YHL005CP38752 130 aa1.95□□□□□ -2.1
RIM1YCR028C-A YIL102CP40488 101 aa1.95□□□□□ -2.1
RIM1YCR028C-A DDR2P89113 61 aa1.95□□□□□ -2.1
RIM1YCR028C-A YOL014WQ08110 124 aa1.95□□□□□ -2.1
RIM1YCR028C-A YOR072WQ08486 104 aa1.95□□□□□ -2.1
RIM1YCR028C-A TDA8Q6B2U8 126 aa1.95□□□□□ -2.1
RIM1YCR028C-A KSH1Q8TGJ3 72 aa1.95□□□□□ -2.1
RIM1YCR028C-A LIP1Q03579 150 aa1.94□□□□□ -2.1
RIM1YCR028C-A YKL065W-AQ2V2P2 73 aa1.94□□□□□ -2.1
RIM1YCR028C-A YOL166W-AQ8TGJ1 51 aa1.94□□□□□ -2.1
RIM1YCR028C-A YLL066W-BQ8TGJ7 56 aa1.94□□□□□ -2.1
RIM1YCR028C-A YCL042WP25572 119 aa1.93□□□□□ -2.1
RIM1YCR028C-A YGL193CP53097 103 aa1.93□□□□□ -2.1
RIM1YCR028C-A BSC4P53841 131 aa1.93□□□□□ -2.1
RIM1YCR028C-A YLR162WQ06235 118 aa1.93□□□□□ -2.1
RIM1YCR028C-A YHR007C-AQ07074 71 aa1.93□□□□□ -2.1
RIM1YCR028C-A RRT15Q3E811 62 aa1.93□□□□□ -2.1
RIM1YCR028C-A MIC10Q96VH5 97 aa1.93□□□□□ -2.1
RIM1YCR028C-A IRA2P19158 3079 aa1.93□□□□□ -2.1
RIM1YCR028C-A RPS30AP0CX33 63 aaKnown RBP1.92□□□□□ -2.1
RIM1YCR028C-A RPS30BP0CX34 63 aaKnown RBP1.92□□□□□ -2.1
RIM1YCR028C-A YOR381W-AQ3E804 55 aa1.92□□□□□ -2.1
RIM1YCR028C-A HUB1Q6Q546 73 aa1.92□□□□□ -2.1
RIM1YCR028C-A YOL013W-AP0C272 63 aaPredicted RBP1.91□□□□□ -2.1
RIM1YCR028C-A YAR064WP39563 99 aa1.91□□□□□ -2.1
RIM1YCR028C-A YGL034CP53186 121 aa1.91□□□□□ -2.1
RIM1YCR028C-A YGR121W-AQ3E816 71 aa1.91□□□□□ -2.1
RIM1YCR028C-A SDH6Q3E785 79 aa1.9□□□□□ -2.11
RIM1YCR028C-A YNL277W-AQ3E7Z0 62 aa1.9□□□□□ -2.11
RIM1YCR028C-A IRA1P18963 3092 aa1.89□□□□□ -2.11
RIM1YCR028C-A YLR157W-DP0CE99 70 aa1.89□□□□□ -2.11
RIM1YCR028C-A YMR122CQ03879 124 aa1.89□□□□□ -2.11
RIM1YCR028C-A OST5Q92316 86 aa1.89□□□□□ -2.11
RIM1YCR028C-A YHR125WP38831 101 aa1.88□□□□□ -2.11
RIM1YCR028C-A YOR268CQ08734 132 aa1.88□□□□□ -2.11
RIM1YCR028C-A YER188C-AP0C0V2 99 aa1.87□□□□□ -2.11
RIM1YCR028C-A YDR034C-AP0C289 58 aa1.87□□□□□ -2.11
RIM1YCR028C-A YJL197C-AP0C5P0 93 aa1.87□□□□□ -2.11
RIM1YCR028C-A SPG1P50088 95 aa1.87□□□□□ -2.11
RIM1YCR028C-A MMS2P53152 137 aa1.87□□□□□ -2.11
RIM1YCR028C-A YPR153WQ06537 140 aa1.87□□□□□ -2.11
RIM1YCR028C-A YOL097W-AQ3E7Y9 61 aa1.87□□□□□ -2.11
RIM1YCR028C-A YMR001C-AQ8TGS9 76 aa1.87□□□□□ -2.11
RIM1YCR028C-A AUA1P32450 94 aa1.86□□□□□ -2.11
RIM1YCR028C-A TRA1P38811 3744 aa1.86□□□□□ -2.11
RIM1YCR028C-A YCR095W-AQ3E787 52 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms