RNA–Protein interactions for RNA: YBR272C

HSM3, Transcript of Proteasome-interacting protein, yeast

Gene HSM3, Length 1,443 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HSM3	YBR272C	HSP150	P32478	413 aa		5.02	□□□□□ -1.61
HSM3	YBR272C	SHU1	P38751	150 aa		5.02	□□□□□ -1.61
HSM3	YBR272C	SEC16	P48415	2195 aa	Known RBP	5.01	□□□□□ -1.61
HSM3	YBR272C	MRPL38	P35996	138 aa	Predicted RBP	5	□□□□□ -1.61
HSM3	YBR272C	KRE9	P39005	276 aa		5	□□□□□ -1.61
HSM3	YBR272C	SPC1	P46965	94 aa		5	□□□□□ -1.61
HSM3	YBR272C	YNL190W	P53872	204 aa		5	□□□□□ -1.61
HSM3	YBR272C	CCW14	O13547	238 aa		4.99	□□□□□ -1.61
HSM3	YBR272C	HOT13	P36078	116 aa		4.99	□□□□□ -1.61
HSM3	YBR272C	MRPS12	P53732	153 aa		4.99	□□□□□ -1.61
HSM3	YBR272C	YJL197C-A	P0C5P0	93 aa		4.98	□□□□□ -1.61
HSM3	YBR272C	YIL156W-B	Q2V2P4	73 aa		4.98	□□□□□ -1.61
HSM3	YBR272C	DAD4	P69851	72 aa		4.97	□□□□□ -1.61
HSM3	YBR272C	GLT1	Q12680	2145 aa	Known RBP	4.97	□□□□□ -1.61
HSM3	YBR272C	RPS27A	P35997	82 aa	Known RBP	4.97	□□□□□ -1.61
HSM3	YBR272C	RPS27B	P38711	82 aa		4.97	□□□□□ -1.61
HSM3	YBR272C	YMR244W	Q04018	355 aa		4.97	□□□□□ -1.61
HSM3	YBR272C	YCR095W-A	Q3E787	52 aa		4.97	□□□□□ -1.61
HSM3	YBR272C	COX23	P38824	151 aa		4.96	□□□□□ -1.62
HSM3	YBR272C	ARC15	P40518	154 aa	RIP-Chip data	4.96	□□□□□ -1.62	not detected
HSM3	YBR272C	YOR032W-A	Q8TGS1	66 aa		4.96	□□□□□ -1.62
HSM3	YBR272C	YGL149W	P53116	101 aa		4.95	□□□□□ -1.62
HSM3	YBR272C	MRX7	P53869	86 aa		4.95	□□□□□ -1.62
HSM3	YBR272C	FAS1	P07149	2051 aa	Known RBP	4.94	□□□□□ -1.62
HSM3	YBR272C	RTC6	O14464	93 aa		4.93	□□□□□ -1.62
HSM3	YBR272C	YJR107C-A	P0CT86	78 aa		4.93	□□□□□ -1.62
HSM3	YBR272C	SNA2	P56508	79 aa		4.93	□□□□□ -1.62
HSM3	YBR272C	YDL241W	Q07738	123 aa		4.93	□□□□□ -1.62
HSM3	YBR272C	YDR010C	Q12426	110 aa		4.93	□□□□□ -1.62
HSM3	YBR272C	YMR141C	P40211	102 aa		4.92	□□□□□ -1.62
HSM3	YBR272C	YGL258W-A	Q3E740	77 aa		4.91	□□□□□ -1.62
HSM3	YBR272C	YOR008C-A	Q3E7B9	74 aa		4.91	□□□□□ -1.62
HSM3	YBR272C	BPH1	P25356	2167 aa		4.91	□□□□□ -1.62
HSM3	YBR272C	YPR013C	Q12145	317 aa		4.9	□□□□□ -1.62
HSM3	YBR272C	YOR034C-A	Q3E735	80 aa		4.9	□□□□□ -1.62
HSM3	YBR272C	POR2	P40478	281 aa		4.89	□□□□□ -1.63
HSM3	YBR272C	BSC4	P53841	131 aa		4.89	□□□□□ -1.63
HSM3	YBR272C	RPS11A	P0CX47	156 aa	Known RBP	4.89	□□□□□ -1.63
HSM3	YBR272C	RPS11B	P0CX48	156 aa	Known RBP	4.89	□□□□□ -1.63
HSM3	YBR272C	YNL042W-B	Q3E7Z2	85 aa		4.89	□□□□□ -1.63
HSM3	YBR272C	HUB1	Q6Q546	73 aa		4.89	□□□□□ -1.63
HSM3	YBR272C	YLR236C	A0A023PZG4	107 aa		4.87	□□□□□ -1.63
HSM3	YBR272C	RPL38	P49167	78 aa	Known RBP	4.87	□□□□□ -1.63
HSM3	YBR272C	ATP18	P81450	59 aa		4.87	□□□□□ -1.63
HSM3	YBR272C	YLR342W-A	Q3E810	57 aa		4.86	□□□□□ -1.63
HSM3	YBR272C	COX14	P39103	70 aa		4.85	□□□□□ -1.63
HSM3	YBR272C	QCR8	P08525	94 aa		4.84	□□□□□ -1.63
HSM3	YBR272C	YSF3	P0C074	85 aa	Predicted RBP	4.83	□□□□□ -1.64
HSM3	YBR272C	YBR219C	P38317	127 aa		4.82	□□□□□ -1.64
HSM3	YBR272C	IGD1	P43598	195 aa		4.82	□□□□□ -1.64
HSM3	YBR272C	YCR001W	P25347	104 aa		4.81	□□□□□ -1.64
HSM3	YBR272C	ATP17	Q06405	101 aa		4.81	□□□□□ -1.64
HSM3	YBR272C	YCR022C	P25620	114 aa		4.8	□□□□□ -1.64
HSM3	YBR272C	YBR027C	P38220	110 aa		4.8	□□□□□ -1.64
HSM3	YBR272C	YMR254C	Q04838	102 aa		4.8	□□□□□ -1.64
HSM3	YBR272C	YCL048W-A	Q2V2Q2	79 aa		4.8	□□□□□ -1.64
HSM3	YBR272C	DYN1	P36022	4092 aa		4.79	□□□□□ -1.64
HSM3	YBR272C	YER078W-A	Q3E7A2	54 aa		4.79	□□□□□ -1.64
HSM3	YBR272C	YFR009W-A	P0C5M9	85 aa		4.78	□□□□□ -1.64
HSM3	YBR272C	YIL102C	P40488	101 aa		4.78	□□□□□ -1.64
HSM3	YBR272C	CCW12	Q12127	133 aa		4.78	□□□□□ -1.64
HSM3	YBR272C	YJR146W	P47174	117 aa		4.77	□□□□□ -1.65
HSM3	YBR272C	Q0297	Q9ZZV8	51 aa		4.77	□□□□□ -1.65
HSM3	YBR272C	AQY2	P0CD90	149 aa		4.76	□□□□□ -1.65
HSM3	YBR272C	YMR001C-A	Q8TGS9	76 aa		4.75	□□□□□ -1.65
HSM3	YBR272C	YPR010C-A	A5Z2X5	72 aa		4.74	□□□□□ -1.65
HSM3	YBR272C	YLR157W-D	P0CE99	70 aa		4.74	□□□□□ -1.65
HSM3	YBR272C	YHR125W	P38831	101 aa		4.74	□□□□□ -1.65
HSM3	YBR272C	SDH6	Q3E785	79 aa		4.74	□□□□□ -1.65
HSM3	YBR272C	ECM19	Q06011	112 aa		4.72	□□□□□ -1.65
HSM3	YBR272C	BLM10	P43583	2143 aa		4.72	□□□□□ -1.65
HSM3	YBR272C	YNL122C	P53921	115 aa	Predicted RBP	4.72	□□□□□ -1.65
HSM3	YBR272C	NCE101	Q02820	53 aa		4.72	□□□□□ -1.65
HSM3	YBR272C	YEL008W	P40001	126 aa		4.69	□□□□□ -1.66
HSM3	YBR272C	YDR114C	Q04597	100 aa		4.69	□□□□□ -1.66
HSM3	YBR272C	YOL013W-A	P0C272	63 aa	Predicted RBP	4.68	□□□□□ -1.66
HSM3	YBR272C	YGL014C-A	P0C5N1	53 aa		4.68	□□□□□ -1.66
HSM3	YBR272C	LCL2	Q08045	131 aa		4.68	□□□□□ -1.66
HSM3	YBR272C	CMC4	Q3E7A9	73 aa		4.68	□□□□□ -1.66
HSM3	YBR272C	MDN1	Q12019	4910 aa	Known RBP	4.68	□□□□□ -1.66
HSM3	YBR272C	YJL027C	P47063	138 aa	Predicted RBP	4.67	□□□□□ -1.66
HSM3	YBR272C	YEL014C	P39999	101 aa		4.65	□□□□□ -1.66
HSM3	YBR272C	SGF11	Q03067	99 aa		4.64	□□□□□ -1.67
HSM3	YBR272C	YDR210W	Q03482	75 aa		4.64	□□□□□ -1.67
HSM3	YBR272C	YLL006W-A	Q3E814	58 aa		4.63	□□□□□ -1.67
HSM3	YBR272C	YMR122W-A	Q3E842	84 aa		4.63	□□□□□ -1.67
HSM3	YBR272C	YHR032W-A	P0C5N6	59 aa		4.62	□□□□□ -1.67
HSM3	YBR272C	URA2	P07259	2214 aa	Known RBP	4.6	□□□□□ -1.67
HSM3	YBR272C	YJR085C	P47131	105 aa	Known RBP	4.59	□□□□□ -1.67
HSM3	YBR272C	YPR195C	Q06594	109 aa		4.57	□□□□□ -1.68
HSM3	YBR272C	YBR200W-A	Q3E755	54 aa		4.57	□□□□□ -1.68
HSM3	YBR272C	VAM10	Q08474	114 aa		4.56	□□□□□ -1.68
HSM3	YBR272C	COX8	P04039	78 aa		4.55	□□□□□ -1.68
HSM3	YBR272C	YDR115W	Q04598	105 aa		4.55	□□□□□ -1.68
HSM3	YBR272C	Q0032	Q9ZZX7	96 aa		4.55	□□□□□ -1.68
HSM3	YBR272C	YHR213W-B	Q8TGK1	99 aa		4.55	□□□□□ -1.68
HSM3	YBR272C	YBL039W-B	P0C268	59 aa		4.53	□□□□□ -1.68
HSM3	YBR272C	SIP18	P50263	79 aa		4.53	□□□□□ -1.68
HSM3	YBR272C	YDL012C	Q12489	107 aa		4.52	□□□□□ -1.69
HSM3	YBR272C	YJL133C-A	Q3E7A3	74 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 65.6 ms