RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C YHR086W-AQ3E746 53 aa3.47□□□□□ -1.85
SEC18YBR080C YHR173CP38864 112 aa3.46□□□□□ -1.85
SEC18YBR080C PRM7Q12459 698 aa3.46□□□□□ -1.85
SEC18YBR080C MRPL31P14063 131 aaPredicted RBP3.46□□□□□ -1.86
SEC18YBR080C YNL146C-AQ3E7Z1 64 aa3.46□□□□□ -1.86
SEC18YBR080C CCW14O13547 238 aa3.45□□□□□ -1.86
SEC18YBR080C YOR314WQ12506 109 aa3.45□□□□□ -1.86
SEC18YBR080C YGL041C-BQ3E750 60 aa3.45□□□□□ -1.86
SEC18YBR080C YGR121W-AQ3E816 71 aa3.45□□□□□ -1.86
SEC18YBR080C FAB1P34756 2278 aa3.43□□□□□ -1.86
SEC18YBR080C BSC4P53841 131 aa3.43□□□□□ -1.86
SEC18YBR080C QCR9P22289 66 aa3.42□□□□□ -1.86
SEC18YBR080C NOP10Q6Q547 58 aaPredicted RBP3.42□□□□□ -1.86
SEC18YBR080C YAL065CO13511 128 aa3.41□□□□□ -1.86
SEC18YBR080C COA2Q3E823 68 aa3.41□□□□□ -1.86
SEC18YBR080C YGR240C-AQ3E786 66 aa3.4□□□□□ -1.86
SEC18YBR080C BRR2P32639 2163 aaKnown RBP3.4□□□□□ -1.87
SEC18YBR080C FPR2P32472 135 aa3.4□□□□□ -1.87
SEC18YBR080C AQY2P0CD90 149 aa3.39□□□□□ -1.87
SEC18YBR080C RPS11AP0CX47 156 aaKnown RBP3.38□□□□□ -1.87
SEC18YBR080C RPS11BP0CX48 156 aaKnown RBP3.38□□□□□ -1.87
SEC18YBR080C ERI1P62651 68 aaKnown RBP3.36□□□□□ -1.87
SEC18YBR080C LCL1Q02786 101 aa3.36□□□□□ -1.87
SEC18YBR080C NCE101Q02820 53 aa3.36□□□□□ -1.87
SEC18YBR080C YPR108W-AQ3E7B3 70 aa3.36□□□□□ -1.87
SEC18YBR080C YIL102C-AQ2V2P5 75 aa3.36□□□□□ -1.87
SEC18YBR080C YKL065W-AQ2V2P2 73 aa3.35□□□□□ -1.87
SEC18YBR080C YDL022C-AP0C5L6 82 aa3.34□□□□□ -1.87
SEC18YBR080C COX12Q01519 83 aa3.34□□□□□ -1.87
SEC18YBR080C YGR035W-AQ45U48 73 aa3.34□□□□□ -1.87
SEC18YBR080C HUG1Q6Q5K6 68 aa3.34□□□□□ -1.87
SEC18YBR080C YMR007WQ03675 126 aa3.33□□□□□ -1.88
SEC18YBR080C YKL023C-AQ2V2P3 75 aa3.33□□□□□ -1.88
SEC18YBR080C AIM19P40502 157 aa3.32□□□□□ -1.88
SEC18YBR080C YOR032W-AQ8TGS1 66 aa3.32□□□□□ -1.88
SEC18YBR080C YDR524C-BQ3E6R4 66 aa3.31□□□□□ -1.88
SEC18YBR080C PAU7P39545 55 aa3.3□□□□□ -1.88
SEC18YBR080C YHR212W-AP0CX91 67 aa3.28□□□□□ -1.88
SEC18YBR080C MGR2Q02889 113 aa3.28□□□□□ -1.88
SEC18YBR080C YGL258W-AQ3E740 77 aa3.28□□□□□ -1.88
SEC18YBR080C YDR246W-AQ3E763 66 aa3.27□□□□□ -1.89
SEC18YBR080C YOR034C-AQ3E735 80 aa3.27□□□□□ -1.89
SEC18YBR080C HFA1P32874 2273 aa3.26□□□□□ -1.89
SEC18YBR080C YSY6P38374 65 aa3.26□□□□□ -1.89
SEC18YBR080C YNL122CP53921 115 aaPredicted RBP3.25□□□□□ -1.89
SEC18YBR080C YMR122W-AQ3E842 84 aa3.25□□□□□ -1.89
SEC18YBR080C YOR192C-CQ3E736 78 aa3.24□□□□□ -1.89
SEC18YBR080C YOL013W-AP0C272 63 aaPredicted RBP3.24□□□□□ -1.89
SEC18YBR080C YNL190WP53872 204 aa3.24□□□□□ -1.89
SEC18YBR080C YNL042W-BQ3E7Z2 85 aa3.24□□□□□ -1.89
SEC18YBR080C YBR201C-AQ2V2Q3 67 aa3.23□□□□□ -1.89
SEC18YBR080C RPS27AP35997 82 aaKnown RBP3.23□□□□□ -1.89
SEC18YBR080C RPS27BP38711 82 aa3.23□□□□□ -1.89
SEC18YBR080C SHU1P38751 150 aa3.23□□□□□ -1.89
SEC18YBR080C SEC16P48415 2195 aaKnown RBP3.21□□□□□ -1.9
SEC18YBR080C SPI1P40092 148 aa3.21□□□□□ -1.9
SEC18YBR080C MVB12P42939 101 aa3.21□□□□□ -1.9
SEC18YBR080C TOM7P53507 60 aa3.21□□□□□ -1.9
SEC18YBR080C YIL086CP40503 102 aa3.2□□□□□ -1.9
SEC18YBR080C YJL009WP47078 108 aa3.19□□□□□ -1.9
SEC18YBR080C GIS2P53849 153 aaKnown RBP RIP-Chip data3.19□□□□□ -1.9not detected
SEC18YBR080C Q0032Q9ZZX7 96 aa3.19□□□□□ -1.9
SEC18YBR080C POL2P21951 2222 aaKnown RBP3.19□□□□□ -1.9
SEC18YBR080C SGF11Q03067 99 aa3.18□□□□□ -1.9
SEC18YBR080C BEM2P39960 2167 aaKnown RBP3.18□□□□□ -1.9
SEC18YBR080C YCR001WP25347 104 aa3.17□□□□□ -1.9
SEC18YBR080C TOS6P48560 102 aa3.17□□□□□ -1.9
SEC18YBR080C YLR342W-AQ3E810 57 aa3.17□□□□□ -1.9
SEC18YBR080C EDC1P53080 175 aaPredicted RBP3.17□□□□□ -1.9
SEC18YBR080C HUA1P40325 198 aa3.16□□□□□ -1.9
SEC18YBR080C BLM10P43583 2143 aa3.14□□□□□ -1.91
SEC18YBR080C YMR141CP40211 102 aa3.13□□□□□ -1.91
SEC18YBR080C YOR008C-AQ3E7B9 74 aa3.13□□□□□ -1.91
SEC18YBR080C RPS30AP0CX33 63 aaKnown RBP3.1□□□□□ -1.91
SEC18YBR080C RPS30BP0CX34 63 aaKnown RBP3.1□□□□□ -1.91
SEC18YBR080C ATP18P81450 59 aa3.1□□□□□ -1.91
SEC18YBR080C SIP18P50263 79 aa3.09□□□□□ -1.91
SEC18YBR080C YAR064WP39563 99 aa3.09□□□□□ -1.92
SEC18YBR080C YJR128WP47162 119 aa3.09□□□□□ -1.92
SEC18YBR080C YIL046W-AQ3E7Z4 54 aa3.09□□□□□ -1.92
SEC18YBR080C ATP17Q06405 101 aa3.05□□□□□ -1.92
SEC18YBR080C YMR105W-AQ8TGS8 64 aa3.05□□□□□ -1.92
SEC18YBR080C URA2P07259 2214 aaKnown RBP3.04□□□□□ -1.92
SEC18YBR080C HHY1P39982 102 aa3.04□□□□□ -1.92
SEC18YBR080C YOR072WQ08486 104 aa3.04□□□□□ -1.92
SEC18YBR080C RPL39P04650 51 aa3.02□□□□□ -1.93
SEC18YBR080C SDH6Q3E785 79 aa3.02□□□□□ -1.93
SEC18YBR080C YBR200W-AQ3E755 54 aa3.01□□□□□ -1.93
SEC18YBR080C SEN1Q00416 2231 aaKnown RBP3.01□□□□□ -1.93
SEC18YBR080C RPC10P40422 70 aa3□□□□□ -1.93
SEC18YBR080C YJR107C-AP0CT86 78 aa2.99□□□□□ -1.93
SEC18YBR080C AUA1P32450 94 aa2.98□□□□□ -1.93
SEC18YBR080C TOM1Q03280 3268 aa2.97□□□□□ -1.93
SEC18YBR080C COX7P10174 60 aa2.97□□□□□ -1.93
SEC18YBR080C YDR182W-AQ3E796 67 aa2.97□□□□□ -1.93
SEC18YBR080C YOL166W-AQ8TGJ1 51 aa2.97□□□□□ -1.93
SEC18YBR080C PMP3P87284 55 aa2.95□□□□□ -1.94
SEC18YBR080C TAO3P40468 2376 aa2.94□□□□□ -1.94
SEC18YBR080C HUB1Q6Q546 73 aa2.93□□□□□ -1.94
SEC18YBR080C YGR025WP53216 100 aa2.92□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms