RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 OTOL1A6NHN0 477 aaPredicted RBP17.57■□□□□ 0.4
SREBF1-219ENST00000580540 OAS1P00973 400 aaKnown RBP17.57■□□□□ 0.4
SREBF1-219ENST00000580540 SP9P0CG40 484 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 CCDC192P0DO97 292 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 CD19P15391 556 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 ZXDBP98169 803 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 AMPD2Q01433 879 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 KCNH2Q12809 1159 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 GPRIN1Q7Z2K8 1008 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 DUSP16Q9BY84 665 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 CHRDQ9H2X0 955 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 CCSER2Q9H7U1 834 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 ECT2Q9H8V3 914 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 IL37Q9NZH6 218 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 CFAP97Q9P2B7 532 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 RWDD2AQ9UIY3 292 aa17.57■□□□□ 0.4
SREBF1-219ENST00000580540 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.57■□□□□ 0.4
SREBF1-219ENST00000580540 COCHO43405 550 aa17.56■□□□□ 0.4
SREBF1-219ENST00000580540 TBXAS1P24557 533 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-219ENST00000580540 NBL1P41271 181 aa17.56■□□□□ 0.4
SREBF1-219ENST00000580540 NR1H3Q13133 447 aa17.56■□□□□ 0.4
SREBF1-219ENST00000580540 TPD52L1Q16890 204 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-219ENST00000580540 EML3Q32P44 896 aa17.56■□□□□ 0.4
SREBF1-219ENST00000580540 TSSK4Q6SA08 328 aa17.56■□□□□ 0.4
SREBF1-219ENST00000580540 MAML2Q8IZL2 1156 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-219ENST00000580540 PPM1KQ8N3J5 372 aa17.56■□□□□ 0.4
SREBF1-219ENST00000580540 ATP2A3Q93084 1043 aa17.56■□□□□ 0.4
SREBF1-219ENST00000580540 NUP62CLQ9H1M0 184 aa17.56■□□□□ 0.4
SREBF1-219ENST00000580540 TLR8Q9NR97 1041 aaKnown RBP17.56■□□□□ 0.4
SREBF1-219ENST00000580540 PCDHB4Q9Y5E5 795 aa17.56■□□□□ 0.4
SREBF1-219ENST00000580540 HHLA1C9JL84 531 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 CYP26A1O43174 497 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 GFRA3O60609 400 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 OLFM2O95897 454 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 AFPP02771 609 aaKnown RBP17.55■□□□□ 0.4
SREBF1-219ENST00000580540 TCF3P15923 654 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 GJA4P35212 333 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 PGFP49763 221 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 GRSF1Q12849 480 aaKnown RBP eCLIP17.55■□□□□ 0.4
SREBF1-219ENST00000580540 DGKKQ5KSL6 1271 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 TRIM59Q8IWR1 403 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 MLKLQ8NB16 471 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 NKD2Q969F2 451 aaPredicted RBP17.55■□□□□ 0.4
SREBF1-219ENST00000580540 GBP4Q96PP9 640 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 LMBRD1Q9NUN5 540 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 FBXO4Q9UKT5 387 aa17.55■□□□□ 0.4
SREBF1-219ENST00000580540 PIEZO1Q92508 2521 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 FAM92AA1XBS5 289 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 P4HA2O15460 535 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 TLR5O60602 858 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 NFATC1O95644 943 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 ZDHHC11BP0C7U3 371 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 IRF1P10914 325 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 GALK1P51570 392 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 SLC8A3P57103 927 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 GOLGA7BQ2TAP0 167 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 SGO2Q562F6 1265 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 SNX30Q5VWJ9 437 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 ARHGAP17Q68EM7 881 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 TMEM270Q6UE05 265 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 Q6ZS52 159 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 RRAGAQ7L523 313 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 DDX42Q86XP3 938 aaKnown RBP eCLIP17.54■□□□□ 0.4
SREBF1-219ENST00000580540 EHBP1Q8NDI1 1231 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 CHFRQ96EP1 664 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 P2RY13Q9BPV8 354 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 FAM124BQ9H5Z6 455 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-219ENST00000580540 SCML2Q9UQR0 700 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 SH3BP1Q9Y3L3 701 aa17.54■□□□□ 0.4
SREBF1-219ENST00000580540 A0A1W2PQH9 124 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 PROB1E7EW31 1015 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 SLC9A3R1O14745 358 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-219ENST00000580540 PMM2O15305 246 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 TBX18O95935 607 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 CXCL12P48061 93 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 KIF11P52732 1056 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 MARSP56192 900 aaKnown RBP17.53■□□□□ 0.4
SREBF1-219ENST00000580540 GAS6Q14393 721 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 NAIF1Q69YI7 327 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-219ENST00000580540 ZC3H14Q6PJT7 736 aaKnown RBP17.53■□□□□ 0.4
SREBF1-219ENST00000580540 ANKRD52Q8NB46 1076 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 KAT5Q92993 513 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 EXOC4Q96A65 974 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 CNOT6LQ96LI5 555 aaKnown RBP17.53■□□□□ 0.4
SREBF1-219ENST00000580540 PNPLA8Q9NP80 782 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 HESX1Q9UBX0 185 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 NAGPAQ9UK23 515 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 NUDT5Q9UKK9 219 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 TSPAN16Q9UKR8 245 aa17.53■□□□□ 0.4
SREBF1-219ENST00000580540 HELZP42694 1942 aaKnown RBP17.53■□□□□ 0.4
SREBF1-219ENST00000580540 TRDMT1O14717 391 aaKnown RBP17.52■□□□□ 0.4
SREBF1-219ENST00000580540 EGFP01133 1207 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 VDRP11473 427 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 RARGP13631 454 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 MTIF2P46199 727 aaKnown RBP17.52■□□□□ 0.4
SREBF1-219ENST00000580540 TUBP50607 506 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 CCR3P51677 355 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 SATB1Q01826 763 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 CCINQ13939 588 aa17.52■□□□□ 0.4
SREBF1-219ENST00000580540 PPP2R5DQ14738 602 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms