RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 LEFTY2O00292 366 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 ARSAP15289 507 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 NBL1P41271 181 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 MRE11P49959 708 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 TUBP50607 506 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 LRRC32Q14392 662 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 TXNDC11Q6PKC3 985 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 ALYREFQ86V81 257 aaKnown RBP29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 KIAA1958Q8N8K9 716 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 ATP2A3Q93084 1043 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 JAKMIP2Q96AA8 810 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 NUP62CLQ9H1M0 184 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 CHRDQ9H2X0 955 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 CPQQ9Y646 472 aa29.19■■■□□ 2.26
ATPAF1-201ENST00000329231 HHLA1C9JL84 531 aa29.18■■■□□ 2.26
ATPAF1-201ENST00000329231 ZDHHC11BP0C7U3 371 aa29.18■■■□□ 2.26
ATPAF1-201ENST00000329231 MBL2P11226 248 aaPredicted RBP29.18■■■□□ 2.26
ATPAF1-201ENST00000329231 CHRNB1P11230 501 aa29.18■■■□□ 2.26
ATPAF1-201ENST00000329231 KCNH2Q12809 1159 aa29.18■■■□□ 2.26
ATPAF1-201ENST00000329231 DDX42Q86XP3 938 aaKnown RBP eCLIP29.18■■■□□ 2.26
ATPAF1-201ENST00000329231 CPA6Q8N4T0 437 aa29.18■■■□□ 2.26
ATPAF1-201ENST00000329231 TLR8Q9NR97 1041 aaKnown RBP29.18■■■□□ 2.26
ATPAF1-201ENST00000329231 WNT6Q9Y6F9 365 aa29.18■■■□□ 2.26
ATPAF1-201ENST00000329231 AFPP02771 609 aaKnown RBP29.17■■■□□ 2.26
ATPAF1-201ENST00000329231 ACO1P21399 889 aaKnown RBP29.17■■■□□ 2.26
ATPAF1-201ENST00000329231 ZXDBP98169 803 aa29.17■■■□□ 2.26
ATPAF1-201ENST00000329231 PON2Q15165 354 aa29.17■■■□□ 2.26
ATPAF1-201ENST00000329231 DGKKQ5KSL6 1271 aa29.17■■■□□ 2.26
ATPAF1-201ENST00000329231 ARHGAP17Q68EM7 881 aa29.17■■■□□ 2.26
ATPAF1-201ENST00000329231 GPRIN1Q7Z2K8 1008 aa29.17■■■□□ 2.26
ATPAF1-201ENST00000329231 SMPD4Q9NXE4 827 aa29.17■■■□□ 2.26
ATPAF1-201ENST00000329231 FBXO4Q9UKT5 387 aa29.17■■■□□ 2.26
ATPAF1-201ENST00000329231 SCML2Q9UQR0 700 aa29.17■■■□□ 2.26
ATPAF1-201ENST00000329231 OTOL1A6NHN0 477 aaPredicted RBP29.16■■■□□ 2.26
ATPAF1-201ENST00000329231 PROB1E7EW31 1015 aa29.16■■■□□ 2.26
ATPAF1-201ENST00000329231 COCHO43405 550 aa29.16■■■□□ 2.26
ATPAF1-201ENST00000329231 SLC8A3P57103 927 aa29.16■■■□□ 2.26
ATPAF1-201ENST00000329231 MTAPQ13126 283 aa29.16■■■□□ 2.26
ATPAF1-201ENST00000329231 EML3Q32P44 896 aa29.16■■■□□ 2.26
ATPAF1-201ENST00000329231 ECT2Q9H8V3 914 aa29.16■■■□□ 2.26
ATPAF1-201ENST00000329231 MYH10P35580 1976 aa29.15■■■□□ 2.26
ATPAF1-201ENST00000329231 SP9P0CG40 484 aa29.15■■■□□ 2.26
ATPAF1-201ENST00000329231 NR1H3Q13133 447 aa29.15■■■□□ 2.26
ATPAF1-201ENST00000329231 MAMSTRQ6ZN01 415 aa29.15■■■□□ 2.26
ATPAF1-201ENST00000329231 MAML2Q8IZL2 1156 aaPredicted RBP29.15■■■□□ 2.26
ATPAF1-201ENST00000329231 PPM1KQ8N3J5 372 aa29.15■■■□□ 2.26
ATPAF1-201ENST00000329231 EHBP1Q8NDI1 1231 aa29.15■■■□□ 2.26
ATPAF1-201ENST00000329231 LMO3Q8TAP4 145 aa29.15■■■□□ 2.26
ATPAF1-201ENST00000329231 EXOC4Q96A65 974 aa29.15■■■□□ 2.26
ATPAF1-201ENST00000329231 NACA2Q9H009 215 aa29.15■■■□□ 2.26
ATPAF1-201ENST00000329231 CCSER2Q9H7U1 834 aa29.15■■■□□ 2.26
ATPAF1-201ENST00000329231 SLC9A3R1O14745 358 aaPredicted RBP29.14■■■□□ 2.26
ATPAF1-201ENST00000329231 KIF11P52732 1056 aa29.14■■■□□ 2.26
ATPAF1-201ENST00000329231 ZNF528Q3MIS6 628 aa29.14■■■□□ 2.26
ATPAF1-201ENST00000329231 SGO2Q562F6 1265 aa29.14■■■□□ 2.26
ATPAF1-201ENST00000329231 CREBRFQ8IUR6 639 aa29.14■■■□□ 2.26
ATPAF1-201ENST00000329231 UBR7Q8N806 425 aa29.14■■■□□ 2.26
ATPAF1-201ENST00000329231 ANKRD52Q8NB46 1076 aa29.14■■■□□ 2.26
ATPAF1-201ENST00000329231 UBXN6Q9BZV1 441 aa29.14■■■□□ 2.26
ATPAF1-201ENST00000329231 LINC00597Q9H2U6 94 aa29.14■■■□□ 2.26
ATPAF1-201ENST00000329231 CFAP97Q9P2B7 532 aa29.14■■■□□ 2.26
ATPAF1-201ENST00000329231 KIAA1257Q9ULG3 409 aa29.14■■■□□ 2.26
ATPAF1-201ENST00000329231 CACNA1IQ9P0X4 2223 aa29.13■■■□□ 2.25
ATPAF1-201ENST00000329231 PIEZO1Q92508 2521 aa29.13■■■□□ 2.25
ATPAF1-201ENST00000329231 NFATC1O95644 943 aa29.13■■■□□ 2.25
ATPAF1-201ENST00000329231 CD19P15391 556 aa29.13■■■□□ 2.25
ATPAF1-201ENST00000329231 GRSF1Q12849 480 aaKnown RBP eCLIP29.13■■■□□ 2.25
ATPAF1-201ENST00000329231 TPD52L1Q16890 204 aaPredicted RBP29.13■■■□□ 2.25
ATPAF1-201ENST00000329231 SYNPOQ8N3V7 929 aa29.13■■■□□ 2.25
ATPAF1-201ENST00000329231 CNOT6LQ96LI5 555 aaKnown RBP29.13■■■□□ 2.25
ATPAF1-201ENST00000329231 MED15Q96RN5 788 aa29.13■■■□□ 2.25
ATPAF1-201ENST00000329231 DACH1Q9UI36 760 aa29.13■■■□□ 2.25
ATPAF1-201ENST00000329231 HELZP42694 1942 aaKnown RBP29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 TRDMT1O14717 391 aaKnown RBP29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 CYP26A1O43174 497 aa29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 TLR5O60602 858 aa29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 VDRP11473 427 aa29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 GJA4P35212 333 aa29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 CSTF1Q05048 431 aaKnown RBP29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 ZC3H14Q6PJT7 736 aaKnown RBP29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 TMEM270Q6UE05 265 aa29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 PRMT8Q9NR22 394 aaPredicted RBP29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 RBM12Q9NTZ6 932 aaKnown RBP29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 HESX1Q9UBX0 185 aa29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 PCDHB4Q9Y5E5 795 aa29.12■■■□□ 2.25
ATPAF1-201ENST00000329231 PATJQ8NI35 1801 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 PAEPP09466 180 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 PGFP49763 221 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 GCNT1Q02742 428 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 CCINQ13939 588 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 PPP2R5DQ14738 602 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 TMEM196Q5HYL7 178 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 CCDC186Q7Z3E2 898 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 CHFRQ96EP1 664 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 ZFRQ96KR1 1074 aaKnown RBP29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 CYLDQ9NQC7 956 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 TBC1D14Q9P2M4 693 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 TSPAN16Q9UKR8 245 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 USP3Q9Y6I4 520 aa29.11■■■□□ 2.25
ATPAF1-201ENST00000329231 E2F8A0AVK6 867 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms