RNA–Protein interactions for RNA: YPR107C

YTH1, Transcript of Essential RNA-binding component of cleavage and polyadenylation factor, yeastyeast

Gene YTH1, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YTH1YPR107C YNL190WP53872 204 aa1.62□□□□□ -2.15
YTH1YPR107C PDR10P51533 1564 aa1.61□□□□□ -2.15
YTH1YPR107C PDX3P38075 228 aaKnown RBP1.61□□□□□ -2.15
YTH1YPR107C RPC10P40422 70 aa1.61□□□□□ -2.15
YTH1YPR107C YNL198CP40166 100 aa1.59□□□□□ -2.15
YTH1YPR107C BSC4P53841 131 aa1.59□□□□□ -2.15
YTH1YPR107C YNL042W-BQ3E7Z2 85 aa1.59□□□□□ -2.15
YTH1YPR107C SWR1Q05471 1514 aa1.57□□□□□ -2.16
YTH1YPR107C ECM12O13529 151 aa1.56□□□□□ -2.16
YTH1YPR107C RPL38P49167 78 aaKnown RBP1.56□□□□□ -2.16
YTH1YPR107C GDB1Q06625 1536 aa1.56□□□□□ -2.16
YTH1YPR107C NHP2P32495 156 aaPredicted RBP1.55□□□□□ -2.16
YTH1YPR107C Q0032Q9ZZX7 96 aa1.55□□□□□ -2.16
YTH1YPR107C COX7P10174 60 aa1.53□□□□□ -2.16
YTH1YPR107C TY1B-BRQ12193 1756 aa1.52□□□□□ -2.17
YTH1YPR107C POL1P13382 1468 aa1.51□□□□□ -2.17
YTH1YPR107C YMR082CQ04276 118 aa1.51□□□□□ -2.17
YTH1YPR107C SCP1Q08873 200 aa1.5□□□□□ -2.17
YTH1YPR107C TAO3P40468 2376 aa1.49□□□□□ -2.17
YTH1YPR107C YJR107C-AP0CT86 78 aa1.48□□□□□ -2.17
YTH1YPR107C YBR201C-AQ2V2Q3 67 aa1.48□□□□□ -2.17
YTH1YPR107C DNF3Q12674 1656 aa1.46□□□□□ -2.18
YTH1YPR107C ATX1P38636 73 aa1.46□□□□□ -2.18
YTH1YPR107C YHR214C-DP0CX93 97 aa1.44□□□□□ -2.18
YTH1YPR107C TOM6P33448 61 aa1.43□□□□□ -2.18
YTH1YPR107C FPR2P32472 135 aa1.39□□□□□ -2.19
YTH1YPR107C YAL065CO13511 128 aa1.38□□□□□ -2.19
YTH1YPR107C YGL194C-AQ2V2P6 80 aa1.38□□□□□ -2.19
YTH1YPR107C YMR122W-AQ3E842 84 aa1.37□□□□□ -2.19
YTH1YPR107C YFR009W-AP0C5M9 85 aa1.36□□□□□ -2.19
YTH1YPR107C PAU23Q07987 124 aa1.34□□□□□ -2.19
YTH1YPR107C PAU17Q12370 124 aa1.34□□□□□ -2.19
YTH1YPR107C LTE1P07866 1435 aa1.33□□□□□ -2.2
YTH1YPR107C SKI3P17883 1432 aaKnown RBP1.33□□□□□ -2.2
YTH1YPR107C ECM29P38737 1868 aa1.33□□□□□ -2.2
YTH1YPR107C YBR016WP38216 128 aa1.33□□□□□ -2.2
YTH1YPR107C YMR175W-AQ3E766 64 aa1.33□□□□□ -2.2
YTH1YPR107C TY1B-PR2P0C2J0 1756 aa1.33□□□□□ -2.2
YTH1YPR107C ATP18P81450 59 aa1.32□□□□□ -2.2
YTH1YPR107C YKL068W-AQ3E826 78 aa1.32□□□□□ -2.2
YTH1YPR107C YOR343CQ12484 108 aa1.31□□□□□ -2.2
YTH1YPR107C MOT1P32333 1867 aa1.31□□□□□ -2.2
YTH1YPR107C TY1B-DR6P0C2I3 1755 aa1.29□□□□□ -2.2
YTH1YPR107C TY1B-LR2P0C2I5 1755 aa1.29□□□□□ -2.2
YTH1YPR107C TY1B-PR3P0C2J1 1755 aaKnown RBP1.29□□□□□ -2.2
YTH1YPR107C TY1B-JR2P47100 1755 aaKnown RBP1.29□□□□□ -2.2
YTH1YPR107C TY1B-MR1Q04214 1755 aa1.29□□□□□ -2.2
YTH1YPR107C TY1B-MR2Q04670 1755 aaKnown RBP1.29□□□□□ -2.2
YTH1YPR107C TY1B-NL1Q12112 1755 aa1.29□□□□□ -2.2
YTH1YPR107C TY1B-GR1Q12141 1755 aa1.29□□□□□ -2.2
YTH1YPR107C TY1B-GR3Q12316 1755 aa1.29□□□□□ -2.2
YTH1YPR107C TY1B-PLQ12414 1755 aaKnown RBP1.29□□□□□ -2.2
YTH1YPR107C TY1B-ORQ92393 1755 aa1.29□□□□□ -2.2
YTH1YPR107C SDH6Q3E785 79 aa1.29□□□□□ -2.2
YTH1YPR107C YIL134C-AQ45U18 67 aa1.28□□□□□ -2.2
YTH1YPR107C ESC1Q03661 1658 aaKnown RBP1.28□□□□□ -2.2
YTH1YPR107C STT4P37297 1900 aa1.23□□□□□ -2.21
YTH1YPR107C TY1B-LR3P0C2I6 1755 aaKnown RBP1.22□□□□□ -2.21
YTH1YPR107C NOP10Q6Q547 58 aaPredicted RBP1.2□□□□□ -2.22
YTH1YPR107C YSP2Q06681 1438 aa1.2□□□□□ -2.22
YTH1YPR107C HKR1P41809 1802 aa1.19□□□□□ -2.22
YTH1YPR107C CWP2P43497 92 aa1.16□□□□□ -2.22
YTH1YPR107C YOR105WQ08504 108 aa1.16□□□□□ -2.22
YTH1YPR107C YOL097W-AQ3E7Y9 61 aa1.15□□□□□ -2.23
YTH1YPR107C YCR085WP25650 117 aa1.14□□□□□ -2.23
YTH1YPR107C SGF11Q03067 99 aa1.12□□□□□ -2.23
YTH1YPR107C BPH1P25356 2167 aa1.12□□□□□ -2.23
YTH1YPR107C UTP10P42945 1769 aaKnown RBP1.11□□□□□ -2.23
YTH1YPR107C YKL065W-AQ2V2P2 73 aa1.11□□□□□ -2.23
YTH1YPR107C YPR108W-AQ3E7B3 70 aa1.11□□□□□ -2.23
YTH1YPR107C YIL156W-BQ2V2P4 73 aa1.09□□□□□ -2.23
YTH1YPR107C XRN1P22147 1528 aaKnown RBP1.08□□□□□ -2.24
YTH1YPR107C TY1B-DR5P0C2I2 1755 aa1.08□□□□□ -2.24
YTH1YPR107C TY1B-PR1P0C2I9 1755 aaKnown RBP1.08□□□□□ -2.24
YTH1YPR107C TY1B-JR1P47098 1755 aa1.08□□□□□ -2.24
YTH1YPR107C TY1B-ML2Q03434 1755 aaKnown RBP1.08□□□□□ -2.24
YTH1YPR107C TY1B-ER1Q03612 1755 aa1.08□□□□□ -2.24
YTH1YPR107C TY1B-ER2Q03619 1755 aa1.08□□□□□ -2.24
YTH1YPR107C TY1B-DR1Q03855 1755 aa1.08□□□□□ -2.24
YTH1YPR107C TY1B-ML1Q04711 1755 aaKnown RBP1.08□□□□□ -2.24
YTH1YPR107C TY1B-LR1Q12088 1755 aaKnown RBP1.08□□□□□ -2.24
YTH1YPR107C TY1B-GR2Q12269 1755 aa1.08□□□□□ -2.24
YTH1YPR107C TY1B-OLQ12273 1755 aa1.08□□□□□ -2.24
YTH1YPR107C TY1B-DR3Q99231 1755 aa1.08□□□□□ -2.24
YTH1YPR107C YBR032WP38223 100 aa1.07□□□□□ -2.24
YTH1YPR107C EDC1P53080 175 aaPredicted RBP1.06□□□□□ -2.24
YTH1YPR107C POC4Q12245 148 aaPredicted RBP1.06□□□□□ -2.24
YTH1YPR107C MLP1Q02455 1875 aaKnown RBP1.05□□□□□ -2.24
YTH1YPR107C YOR314WQ12506 109 aa1.03□□□□□ -2.24
YTH1YPR107C YPR145C-AQ2V2P0 78 aa1.03□□□□□ -2.24
YTH1YPR107C MMS22Q06164 1454 aa0.99□□□□□ -2.25
YTH1YPR107C YDR381C-AQ3E6R5 114 aa0.99□□□□□ -2.25
YTH1YPR107C YGR025WP53216 100 aa0.97□□□□□ -2.25
YTH1YPR107C ESP1Q03018 1630 aa0.96□□□□□ -2.26
YTH1YPR107C PMD1P32634 1753 aa0.92□□□□□ -2.26
YTH1YPR107C SEN1Q00416 2231 aaKnown RBP0.89□□□□□ -2.27
YTH1YPR107C YDL022C-AP0C5L6 82 aa0.85□□□□□ -2.27
YTH1YPR107C SWM2P40342 146 aa0.85□□□□□ -2.27
YTH1YPR107C SIN3P22579 1536 aa0.84□□□□□ -2.28
YTH1YPR107C QCR9P22289 66 aa0.82□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms