RNA–Protein interactions for RNA: YPL232W

SSO1, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO1YPL232W COX10P21592 462 aa2.84□□□□□ -1.95
SSO1YPL232W UBC12P52491 188 aa2.84□□□□□ -1.95
SSO1YPL232W YCR024C-BQ3E7Z8 88 aa2.84□□□□□ -1.95
SSO1YPL232W RPL29P05747 59 aaPredicted RBP2.83□□□□□ -1.96
SSO1YPL232W HAP3P13434 144 aa2.83□□□□□ -1.96
SSO1YPL232W NTF2P33331 125 aaKnown RBP2.83□□□□□ -1.96
SSO1YPL232W ERV14P53173 138 aa2.83□□□□□ -1.96
SSO1YPL232W YPL257WQ08974 193 aa2.83□□□□□ -1.96
SSO1YPL232W YLR112WQ12130 139 aa2.83□□□□□ -1.96
SSO1YPL232W RPS22BQ3E7Y3 130 aaKnown RBP2.83□□□□□ -1.96
SSO1YPL232W YBR298C-AQ8TGK4 73 aa2.83□□□□□ -1.96
SSO1YPL232W YNL190WP53872 204 aa2.82□□□□□ -1.96
SSO1YPL232W YLL006W-AQ3E814 58 aa2.82□□□□□ -1.96
SSO1YPL232W SPT4P32914 102 aaPredicted RBP2.81□□□□□ -1.96
SSO1YPL232W YHL018WP38744 120 aaPredicted RBP2.81□□□□□ -1.96
SSO1YPL232W ATP14Q12349 124 aa2.81□□□□□ -1.96
SSO1YPL232W YNL042W-BQ3E7Z2 85 aa2.81□□□□□ -1.96
SSO1YPL232W YNL122CP53921 115 aaPredicted RBP2.79□□□□□ -1.96
SSO1YPL232W YML079WQ03629 201 aa2.79□□□□□ -1.96
SSO1YPL232W QCR8P08525 94 aa2.78□□□□□ -1.96
SSO1YPL232W RPL18AP0CX49 186 aaKnown RBP2.78□□□□□ -1.96
SSO1YPL232W RPL18BP0CX50 186 aaKnown RBP2.78□□□□□ -1.96
SSO1YPL232W SRB6P32570 121 aa2.78□□□□□ -1.96
SSO1YPL232W GSP1P32835 219 aaKnown RBP2.78□□□□□ -1.96
SSO1YPL232W PEX17P40155 199 aa2.78□□□□□ -1.96
SSO1YPL232W FMP16Q12497 93 aa2.78□□□□□ -1.96
SSO1YPL232W YMR230W-AQ3E7B5 62 aa2.78□□□□□ -1.96
SSO1YPL232W YOR020W-AQ3E824 90 aa2.78□□□□□ -1.96
SSO1YPL232W UGX2P32772 223 aa2.77□□□□□ -1.97
SSO1YPL232W YBR027CP38220 110 aa2.77□□□□□ -1.97
SSO1YPL232W YHL005CP38752 130 aa2.77□□□□□ -1.97
SSO1YPL232W UBC11P52492 156 aa2.77□□□□□ -1.97
SSO1YPL232W AIM11P87275 137 aa2.77□□□□□ -1.97
SSO1YPL232W YEL045CP32616 141 aa2.76□□□□□ -1.97
SSO1YPL232W YPL073CP40323 161 aa2.76□□□□□ -1.97
SSO1YPL232W BSC4P53841 131 aa2.76□□□□□ -1.97
SSO1YPL232W RPL26AP05743 127 aaKnown RBP2.75□□□□□ -1.97
SSO1YPL232W YCR043CP25361 127 aa2.75□□□□□ -1.97
SSO1YPL232W MRPL11P36521 249 aaPredicted RBP2.75□□□□□ -1.97
SSO1YPL232W YGL118CP53132 145 aa2.75□□□□□ -1.97
SSO1YPL232W RPL26BP53221 127 aaKnown RBP2.75□□□□□ -1.97
SSO1YPL232W YBR230W-AQ3E762 66 aa2.75□□□□□ -1.97
SSO1YPL232W RPL27BP0C2H7 136 aaKnown RBP2.74□□□□□ -1.97
SSO1YPL232W MRPS12P53732 153 aa2.74□□□□□ -1.97
SSO1YPL232W YMR103CQ04436 120 aa2.74□□□□□ -1.97
SSO1YPL232W HPA2Q06592 156 aa2.74□□□□□ -1.97
SSO1YPL232W YDL022C-AP0C5L6 82 aa2.73□□□□□ -1.97
SSO1YPL232W VMA21P41806 77 aa2.73□□□□□ -1.97
SSO1YPL232W YHR007C-AQ07074 71 aa2.73□□□□□ -1.97
SSO1YPL232W YJL127C-BQ3E828 52 aa2.73□□□□□ -1.97
SSO1YPL232W HTL1Q9URQ5 78 aa2.73□□□□□ -1.97
SSO1YPL232W YCR007CP25354 239 aa2.72□□□□□ -1.97
SSO1YPL232W COX7P10174 60 aa2.71□□□□□ -1.98
SSO1YPL232W GSP2P32836 220 aaKnown RBP2.71□□□□□ -1.98
SSO1YPL232W YOR072WQ08486 104 aa2.71□□□□□ -1.98
SSO1YPL232W RPL28P02406 149 aaKnown RBP2.7□□□□□ -1.98
SSO1YPL232W FYV5P25585 152 aa2.69□□□□□ -1.98
SSO1YPL232W YKR041WP36134 250 aa2.69□□□□□ -1.98
SSO1YPL232W ATG8P38182 117 aaRIP-Chip data2.69□□□□□ -1.98not detected
SSO1YPL232W POP3P53833 195 aaPredicted RBP2.69□□□□□ -1.98
SSO1YPL232W YLR236CA0A023PZG4 107 aa2.68□□□□□ -1.98
SSO1YPL232W RGM1Q00453 211 aa2.68□□□□□ -1.98
SSO1YPL232W FYV4P38783 130 aaPredicted RBP2.67□□□□□ -1.98
SSO1YPL232W YNL184CP53876 108 aa2.67□□□□□ -1.98
SSO1YPL232W ICY1Q04329 127 aa2.67□□□□□ -1.98
SSO1YPL232W FYV12Q08559 129 aa2.67□□□□□ -1.98
SSO1YPL232W YPL261CQ08976 102 aa2.67□□□□□ -1.98
SSO1YPL232W MSA2P36157 363 aa2.66□□□□□ -1.98
SSO1YPL232W YEL067CP39978 195 aa2.66□□□□□ -1.98
SSO1YPL232W CYT2Q00873 224 aa2.66□□□□□ -1.98
SSO1YPL232W IRC21Q04772 201 aa2.66□□□□□ -1.98
SSO1YPL232W PAU17Q12370 124 aa2.66□□□□□ -1.98
SSO1YPL232W ATP5P09457 212 aa2.65□□□□□ -1.99
SSO1YPL232W Q0017Q9ZZX8 53 aa2.65□□□□□ -1.99
SSO1YPL232W RPL36BO14455 100 aaKnown RBP2.64□□□□□ -1.99
SSO1YPL232W YER134CP40081 178 aa2.63□□□□□ -1.99
SSO1YPL232W TIM11P81449 96 aaPredicted RBP2.63□□□□□ -1.99
SSO1YPL232W YDR210WQ03482 75 aa2.62□□□□□ -1.99
SSO1YPL232W YHR139C-AO13536 103 aa2.61□□□□□ -1.99
SSO1YPL232W BET1P22804 142 aa2.61□□□□□ -1.99
SSO1YPL232W RPS29AP41057 56 aaKnown RBP2.61□□□□□ -1.99
SSO1YPL232W YIA6P40556 373 aa2.6□□□□□ -1.99
SSO1YPL232W IGO2Q9P305 131 aa2.6□□□□□ -1.99
SSO1YPL232W YNR077CP53758 84 aa2.59□□□□□ -1.99
SSO1YPL232W YER175W-AQ8TGU4 54 aa2.59□□□□□ -1.99
SSO1YPL232W YLR157W-DP0CE99 70 aa2.58□□□□□ -2
SSO1YPL232W YJR128WP47162 119 aa2.58□□□□□ -2
SSO1YPL232W ARL3Q02804 198 aa2.58□□□□□ -2
SSO1YPL232W SFT1P43682 97 aa2.57□□□□□ -2
SSO1YPL232W HHO1P53551 258 aa2.57□□□□□ -2
SSO1YPL232W YOL097W-AQ3E7Y9 61 aa2.57□□□□□ -2
SSO1YPL232W FUN14P18411 198 aa2.56□□□□□ -2
SSO1YPL232W MID2P36027 376 aa2.56□□□□□ -2
SSO1YPL232W NSE4P43124 402 aa2.56□□□□□ -2
SSO1YPL232W YLR050CQ12155 161 aaKnown RBP2.56□□□□□ -2
SSO1YPL232W UIP3P39547 235 aa2.55□□□□□ -2
SSO1YPL232W RSM18P40033 138 aa2.55□□□□□ -2
SSO1YPL232W RPS29BP41058 56 aaKnown RBP2.55□□□□□ -2
SSO1YPL232W PAU23Q07987 124 aa2.55□□□□□ -2
SSO1YPL232W YDL157CQ12082 118 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms