RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W YLR285C-AQ3E771 56 aa1.59□□□□□ -2.15
TRM112YNR046W YCR095W-AQ3E787 52 aa1.59□□□□□ -2.15
TRM112YNR046W SPO14P36126 1683 aa1.58□□□□□ -2.16
TRM112YNR046W APC1P53886 1748 aa1.58□□□□□ -2.16
TRM112YNR046W URB1P34241 1764 aaKnown RBP1.58□□□□□ -2.16
TRM112YNR046W RPL22AP05749 121 aaKnown RBP1.58□□□□□ -2.16
TRM112YNR046W PFY1P07274 126 aa1.58□□□□□ -2.16
TRM112YNR046W AIM4P38305 123 aaPredicted RBP1.58□□□□□ -2.16
TRM112YNR046W LST8P41318 303 aa1.58□□□□□ -2.16
TRM112YNR046W RPL37AP49166 88 aaKnown RBP1.58□□□□□ -2.16
TRM112YNR046W MIC27P50945 234 aa1.58□□□□□ -2.16
TRM112YNR046W YMR321CQ04898 105 aa1.58□□□□□ -2.16
TRM112YNR046W LCL2Q08045 131 aa1.58□□□□□ -2.16
TRM112YNR046W CCW12Q12127 133 aa1.58□□□□□ -2.16
TRM112YNR046W YDR381C-AQ3E6R5 114 aa1.58□□□□□ -2.16
TRM112YNR046W RPO21P04050 1733 aaKnown RBP1.57□□□□□ -2.16
TRM112YNR046W RIM15P43565 1770 aa1.57□□□□□ -2.16
TRM112YNR046W BPH1P25356 2167 aa1.57□□□□□ -2.16
TRM112YNR046W YBR292CP38357 123 aa1.57□□□□□ -2.16
TRM112YNR046W SPC1P46965 94 aa1.57□□□□□ -2.16
TRM112YNR046W SNA2P56508 79 aa1.57□□□□□ -2.16
TRM112YNR046W SED1Q01589 338 aa1.57□□□□□ -2.16
TRM112YNR046W SSK2P53599 1579 aa1.56□□□□□ -2.16
TRM112YNR046W RPL33AP05744 107 aaKnown RBP1.56□□□□□ -2.16
TRM112YNR046W YHR214C-DP0CX93 97 aa1.56□□□□□ -2.16
TRM112YNR046W MRP17P28778 131 aa1.56□□□□□ -2.16
TRM112YNR046W YIL163CP40448 117 aa1.56□□□□□ -2.16
TRM112YNR046W YMR122CQ03879 124 aa1.56□□□□□ -2.16
TRM112YNR046W YOR343CQ12484 108 aa1.56□□□□□ -2.16
TRM112YNR046W PDR12Q02785 1511 aa1.56□□□□□ -2.16
TRM112YNR046W NTE1Q04958 1679 aa1.55□□□□□ -2.16
TRM112YNR046W PAU6P0CE90 120 aa1.55□□□□□ -2.16
TRM112YNR046W PAU18P0CE91 120 aa1.55□□□□□ -2.16
TRM112YNR046W MRPL38P35996 138 aaPredicted RBP1.55□□□□□ -2.16
TRM112YNR046W PAU23Q07987 124 aa1.55□□□□□ -2.16
TRM112YNR046W PAU17Q12370 124 aa1.55□□□□□ -2.16
TRM112YNR046W YCL048W-AQ2V2Q2 79 aa1.55□□□□□ -2.16
TRM112YNR046W YPL038W-AQ3E7B4 63 aa1.55□□□□□ -2.16
TRM112YNR046W MYO4P32492 1471 aa1.55□□□□□ -2.16
TRM112YNR046W UFD4P33202 1483 aa1.55□□□□□ -2.16
TRM112YNR046W YCF1P39109 1515 aaKnown RBP1.55□□□□□ -2.16
TRM112YNR046W PDX3P38075 228 aaKnown RBP1.54□□□□□ -2.16
TRM112YNR046W YBL071CP38185 102 aa1.54□□□□□ -2.16
TRM112YNR046W YOR105WQ08504 108 aa1.54□□□□□ -2.16
TRM112YNR046W YFL041W-AQ3E817 63 aa1.54□□□□□ -2.16
TRM112YNR046W YIL134C-AQ45U18 67 aa1.54□□□□□ -2.16
TRM112YNR046W YSF3P0C074 85 aaPredicted RBP1.53□□□□□ -2.16
TRM112YNR046W YCR001WP25347 104 aa1.53□□□□□ -2.16
TRM112YNR046W YNL198CP40166 100 aa1.53□□□□□ -2.16
TRM112YNR046W VPS55P47111 140 aa1.53□□□□□ -2.16
TRM112YNR046W YNR034W-AQ3E841 98 aa1.53□□□□□ -2.16
TRM112YNR046W BLM10P43583 2143 aa1.52□□□□□ -2.17
TRM112YNR046W YBT1P32386 1661 aa1.52□□□□□ -2.17
TRM112YNR046W SNQ2P32568 1501 aaKnown RBP1.52□□□□□ -2.17
TRM112YNR046W VPS15P22219 1454 aa1.52□□□□□ -2.17
TRM112YNR046W CCW14O13547 238 aa1.52□□□□□ -2.17
TRM112YNR046W TIM12P32830 109 aa1.52□□□□□ -2.17
TRM112YNR046W MPC2P38857 129 aa1.52□□□□□ -2.17
TRM112YNR046W MRX7P53869 86 aa1.52□□□□□ -2.17
TRM112YNR046W YNL122CP53921 115 aaPredicted RBP1.52□□□□□ -2.17
TRM112YNR046W IRC21Q04772 201 aa1.52□□□□□ -2.17
TRM112YNR046W YOR314WQ12506 109 aa1.52□□□□□ -2.17
TRM112YNR046W VMA9Q3E7B6 73 aa1.52□□□□□ -2.17
TRM112YNR046W PDR5P33302 1511 aaKnown RBP1.51□□□□□ -2.17
TRM112YNR046W YER188C-AP0C0V2 99 aa1.51□□□□□ -2.17
TRM112YNR046W YOR072WQ08486 104 aa1.51□□□□□ -2.17
TRM112YNR046W YGL041C-BQ3E750 60 aa1.51□□□□□ -2.17
TRM112YNR046W PAU1P0CE88 120 aa1.5□□□□□ -2.17
TRM112YNR046W PAU14P0CE89 120 aa1.5□□□□□ -2.17
TRM112YNR046W PAU8P0CE92 120 aa1.5□□□□□ -2.17
TRM112YNR046W PAU11P0CE93 120 aa1.5□□□□□ -2.17
TRM112YNR046W PAU13P38725 120 aa1.5□□□□□ -2.17
TRM112YNR046W PAU4P53427 120 aa1.5□□□□□ -2.17
TRM112YNR046W PAU10Q03050 120 aa1.5□□□□□ -2.17
TRM112YNR046W YDR010CQ12426 110 aa1.5□□□□□ -2.17
TRM112YNR046W YKL065W-AQ2V2P2 73 aa1.5□□□□□ -2.17
TRM112YNR046W PAU9Q3E770 120 aa1.5□□□□□ -2.17
TRM112YNR046W ULS1Q08562 1619 aa1.5□□□□□ -2.17
TRM112YNR046W YAL065CO13511 128 aa1.49□□□□□ -2.17
TRM112YNR046W MRPL31P14063 131 aaPredicted RBP1.49□□□□□ -2.17
TRM112YNR046W AIM19P40502 157 aa1.49□□□□□ -2.17
TRM112YNR046W MRPS12P53732 153 aa1.49□□□□□ -2.17
TRM112YNR046W BSC4P53841 131 aa1.49□□□□□ -2.17
TRM112YNR046W COX12Q01519 83 aa1.49□□□□□ -2.17
TRM112YNR046W YIL102C-AQ2V2P5 75 aa1.49□□□□□ -2.17
TRM112YNR046W YGR121W-AQ3E816 71 aa1.49□□□□□ -2.17
TRM112YNR046W POL2P21951 2222 aaKnown RBP1.49□□□□□ -2.17
TRM112YNR046W SPT6P23615 1451 aaKnown RBP1.49□□□□□ -2.17
TRM112YNR046W MMS1Q06211 1407 aa1.49□□□□□ -2.17
TRM112YNR046W HFA1P32874 2273 aa1.49□□□□□ -2.17
TRM112YNR046W IML1P47170 1584 aa1.48□□□□□ -2.17
TRM112YNR046W YOL013W-AP0C272 63 aaPredicted RBP1.48□□□□□ -2.17
TRM112YNR046W QCR9P22289 66 aa1.48□□□□□ -2.17
TRM112YNR046W YDR210WQ03482 75 aa1.48□□□□□ -2.17
TRM112YNR046W COX19Q3E731 98 aa1.48□□□□□ -2.17
TRM112YNR046W VTH1P40438 1549 aa1.48□□□□□ -2.17
TRM112YNR046W VTH2P40890 1549 aa1.48□□□□□ -2.17
TRM112YNR046W CDC25P04821 1589 aa1.47□□□□□ -2.17
TRM112YNR046W FPR2P32472 135 aa1.47□□□□□ -2.17
TRM112YNR046W YHR173CP38864 112 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 12.6 ms