RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W RPS22AP0C0W1 130 aaKnown RBP2.94□□□□□ -1.94
ROT1YMR200W YCL048W-AQ2V2Q2 79 aa2.94□□□□□ -1.94
ROT1YMR200W YLR285C-AQ3E771 56 aa2.94□□□□□ -1.94
ROT1YMR200W YCL042WP25572 119 aa2.93□□□□□ -1.94
ROT1YMR200W YHL037CP38733 133 aa2.93□□□□□ -1.94
ROT1YMR200W YLR162WQ06235 118 aa2.93□□□□□ -1.94
ROT1YMR200W YHR086W-AQ3E746 53 aa2.93□□□□□ -1.94
ROT1YMR200W RRP5Q05022 1729 aaKnown RBP2.93□□□□□ -1.94
ROT1YMR200W MYO1P08964 1928 aa2.92□□□□□ -1.94
ROT1YMR200W LSM2P38203 95 aaKnown RBP2.92□□□□□ -1.94
ROT1YMR200W YIL163CP40448 117 aa2.92□□□□□ -1.94
ROT1YMR200W ICS3P47034 131 aa2.92□□□□□ -1.94
ROT1YMR200W COA4Q05809 96 aa2.92□□□□□ -1.94
ROT1YMR200W LSM6Q06406 86 aaKnown RBP2.92□□□□□ -1.94
ROT1YMR200W YOL118CQ08259 102 aa2.92□□□□□ -1.94
ROT1YMR200W COA3Q3E7B2 85 aa2.92□□□□□ -1.94
ROT1YMR200W YNL146C-AQ3E7Z1 64 aa2.91□□□□□ -1.94
ROT1YMR200W TOM6P33448 61 aa2.9□□□□□ -1.95
ROT1YMR200W YCR095W-AQ3E787 52 aa2.9□□□□□ -1.95
ROT1YMR200W CDC39P25655 2108 aaKnown RBP2.9□□□□□ -1.95
ROT1YMR200W YSF3P0C074 85 aaPredicted RBP2.89□□□□□ -1.95
ROT1YMR200W MHF2Q3E829 80 aa2.89□□□□□ -1.95
ROT1YMR200W VPS55P47111 140 aa2.88□□□□□ -1.95
ROT1YMR200W TY4B-HP0C2J7 1802 aa2.87□□□□□ -1.95
ROT1YMR200W TY4B-JP47024 1803 aa2.87□□□□□ -1.95
ROT1YMR200W RPS22BQ3E7Y3 130 aaKnown RBP2.87□□□□□ -1.95
ROT1YMR200W URB1P34241 1764 aaKnown RBP2.87□□□□□ -1.95
ROT1YMR200W APC1P53886 1748 aa2.86□□□□□ -1.95
ROT1YMR200W CCW14O13547 238 aa2.85□□□□□ -1.95
ROT1YMR200W PAI3P01094 68 aa2.85□□□□□ -1.95
ROT1YMR200W NHP2P32495 156 aaPredicted RBP2.85□□□□□ -1.95
ROT1YMR200W MRPL38P35996 138 aaPredicted RBP2.85□□□□□ -1.95
ROT1YMR200W IRC21Q04772 201 aa2.85□□□□□ -1.95
ROT1YMR200W YBR013CP38215 129 aa2.84□□□□□ -1.95
ROT1YMR200W SNA2P56508 79 aa2.84□□□□□ -1.95
ROT1YMR200W CCW12Q12127 133 aa2.84□□□□□ -1.95
ROT1YMR200W YDR119W-AQ2V2P9 66 aa2.84□□□□□ -1.95
ROT1YMR200W LAA1P39526 2014 aa2.84□□□□□ -1.95
ROT1YMR200W MRP17P28778 131 aa2.83□□□□□ -1.96
ROT1YMR200W YGL041C-BQ3E750 60 aa2.83□□□□□ -1.96
ROT1YMR200W SPC1P46965 94 aa2.82□□□□□ -1.96
ROT1YMR200W YOR343CQ12484 108 aa2.82□□□□□ -1.96
ROT1YMR200W FKS3Q04952 1785 aa2.82□□□□□ -1.96
ROT1YMR200W YDR381C-AQ3E6R5 114 aa2.81□□□□□ -1.96
ROT1YMR200W YBL071CP38185 102 aa2.8□□□□□ -1.96
ROT1YMR200W MIC27P50945 234 aa2.8□□□□□ -1.96
ROT1YMR200W MRPS12P53732 153 aa2.8□□□□□ -1.96
ROT1YMR200W YDR210WQ03482 75 aa2.8□□□□□ -1.96
ROT1YMR200W LCL2Q08045 131 aa2.8□□□□□ -1.96
ROT1YMR200W PAU6P0CE90 120 aa2.79□□□□□ -1.96
ROT1YMR200W PAU18P0CE91 120 aa2.79□□□□□ -1.96
ROT1YMR200W YHR214C-DP0CX93 97 aa2.79□□□□□ -1.96
ROT1YMR200W MRX7P53869 86 aa2.79□□□□□ -1.96
ROT1YMR200W YPR145C-AQ2V2P0 78 aa2.79□□□□□ -1.96
ROT1YMR200W UBR2Q07963 1872 aa2.77□□□□□ -1.97
ROT1YMR200W FAB1P34756 2278 aa2.77□□□□□ -1.97
ROT1YMR200W SWM2P40342 146 aa2.77□□□□□ -1.97
ROT1YMR200W YJL009WP47078 108 aa2.77□□□□□ -1.97
ROT1YMR200W YGR240C-AQ3E786 66 aa2.77□□□□□ -1.97
ROT1YMR200W FAS2P19097 1887 aaKnown RBP2.76□□□□□ -1.97
ROT1YMR200W YFR010W-AP0C5N0 62 aa2.76□□□□□ -1.97
ROT1YMR200W YNL122CP53921 115 aaPredicted RBP2.76□□□□□ -1.97
ROT1YMR200W YPL038W-AQ3E7B4 63 aa2.76□□□□□ -1.97
ROT1YMR200W CYR1P08678 2026 aaKnown RBP2.76□□□□□ -1.97
ROT1YMR200W COX12Q01519 83 aa2.74□□□□□ -1.97
ROT1YMR200W YBR292CP38357 123 aa2.73□□□□□ -1.97
ROT1YMR200W RIM15P43565 1770 aa2.72□□□□□ -1.97
ROT1YMR200W YHR212W-AP0CX91 67 aa2.72□□□□□ -1.97
ROT1YMR200W ATX1P38636 73 aa2.72□□□□□ -1.97
ROT1YMR200W AIM19P40502 157 aa2.72□□□□□ -1.97
ROT1YMR200W YOR314WQ12506 109 aa2.72□□□□□ -1.97
ROT1YMR200W YNR034W-AQ3E841 98 aa2.72□□□□□ -1.97
ROT1YMR200W YER188C-AP0C0V2 99 aa2.71□□□□□ -1.98
ROT1YMR200W MPC2P38857 129 aa2.71□□□□□ -1.98
ROT1YMR200W RPS11AP0CX47 156 aaKnown RBP2.7□□□□□ -1.98
ROT1YMR200W RPS11BP0CX48 156 aaKnown RBP2.7□□□□□ -1.98
ROT1YMR200W BSC4P53841 131 aa2.7□□□□□ -1.98
ROT1YMR200W PAU23Q07987 124 aa2.7□□□□□ -1.98
ROT1YMR200W PAU17Q12370 124 aa2.7□□□□□ -1.98
ROT1YMR200W YKL065W-AQ2V2P2 73 aa2.7□□□□□ -1.98
ROT1YMR200W UTP10P42945 1769 aaKnown RBP2.69□□□□□ -1.98
ROT1YMR200W PAU1P0CE88 120 aa2.69□□□□□ -1.98
ROT1YMR200W PAU14P0CE89 120 aa2.69□□□□□ -1.98
ROT1YMR200W PAU8P0CE92 120 aa2.69□□□□□ -1.98
ROT1YMR200W PAU11P0CE93 120 aa2.69□□□□□ -1.98
ROT1YMR200W MRPL31P14063 131 aaPredicted RBP2.69□□□□□ -1.98
ROT1YMR200W PAU13P38725 120 aa2.69□□□□□ -1.98
ROT1YMR200W PAU4P53427 120 aa2.69□□□□□ -1.98
ROT1YMR200W PAU10Q03050 120 aa2.69□□□□□ -1.98
ROT1YMR200W PAU9Q3E770 120 aa2.69□□□□□ -1.98
ROT1YMR200W PDX3P38075 228 aaKnown RBP2.68□□□□□ -1.98
ROT1YMR200W YFL041W-AQ3E817 63 aa2.68□□□□□ -1.98
ROT1YMR200W ECM29P38737 1868 aa2.68□□□□□ -1.98
ROT1YMR200W ACC1Q00955 2233 aaKnown RBP2.68□□□□□ -1.98
ROT1YMR200W YAL065CO13511 128 aa2.67□□□□□ -1.98
ROT1YMR200W YLR255CO13574 117 aa2.67□□□□□ -1.98
ROT1YMR200W SSS1P35179 80 aa2.67□□□□□ -1.98
ROT1YMR200W YOL131WQ08270 108 aa2.67□□□□□ -1.98
ROT1YMR200W AQY2P0CD90 149 aa2.66□□□□□ -1.98
ROT1YMR200W YOR072WQ08486 104 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 59.4 ms