RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W SHU1P38751 150 aa3.26□□□□□ -1.89
SEN1YLR430W YHL005CP38752 130 aa3.26□□□□□ -1.89
SEN1YLR430W MRPS12P53732 153 aa3.26□□□□□ -1.89
SEN1YLR430W YBL081WP38180 368 aaKnown RBP3.25□□□□□ -1.89
SEN1YLR430W YOR268CQ08734 132 aa3.25□□□□□ -1.89
SEN1YLR430W YML100W-AQ8TGT0 57 aa3.25□□□□□ -1.89
SEN1YLR430W OST5Q92316 86 aa3.25□□□□□ -1.89
SEN1YLR430W YJR146WP47174 117 aa3.25□□□□□ -1.89
SEN1YLR430W YLR162WQ06235 118 aa3.25□□□□□ -1.89
SEN1YLR430W YFR035CP43608 114 aa3.25□□□□□ -1.89
SEN1YLR430W RPS27AP35997 82 aaKnown RBP3.25□□□□□ -1.89
SEN1YLR430W RPS27BP38711 82 aa3.25□□□□□ -1.89
SEN1YLR430W SRL1Q08673 210 aa3.25□□□□□ -1.89
SEN1YLR430W TOS8P53147 276 aa3.24□□□□□ -1.89
SEN1YLR430W YOR020W-AQ3E824 90 aa3.24□□□□□ -1.89
SEN1YLR430W SUT1P53032 299 aaKnown RBP3.24□□□□□ -1.89
SEN1YLR430W ARC15P40518 154 aaRIP-Chip data3.24□□□□□ -1.89not detected
SEN1YLR430W YER188C-AP0C0V2 99 aa3.23□□□□□ -1.89
SEN1YLR430W YGL088WP53151 121 aa3.23□□□□□ -1.89
SEN1YLR430W ATP18P81450 59 aa3.23□□□□□ -1.89
SEN1YLR430W RNH203Q12338 110 aa3.23□□□□□ -1.89
SEN1YLR430W HHF1P02309 103 aaKnown RBP3.23□□□□□ -1.89
SEN1YLR430W YIR020CP40575 100 aa3.23□□□□□ -1.89
SEN1YLR430W YOR376W-AQ3E805 51 aa3.23□□□□□ -1.89
SEN1YLR430W NAG1Q8TGN9 163 aa3.23□□□□□ -1.89
SEN1YLR430W REE1P40893 198 aa3.23□□□□□ -1.89
SEN1YLR430W YMR122CQ03879 124 aa3.23□□□□□ -1.89
SEN1YLR430W EDC1P53080 175 aaPredicted RBP3.22□□□□□ -1.89
SEN1YLR430W YLR236CA0A023PZG4 107 aa3.22□□□□□ -1.89
SEN1YLR430W YGL193CP53097 103 aa3.22□□□□□ -1.89
SEN1YLR430W RPL15AP05748 204 aaKnown RBP3.22□□□□□ -1.89
SEN1YLR430W YFL015CP43578 164 aa3.22□□□□□ -1.89
SEN1YLR430W GSC2P40989 1895 aa3.21□□□□□ -1.9
SEN1YLR430W NOP10Q6Q547 58 aaPredicted RBP3.21□□□□□ -1.9
SEN1YLR430W KRE9P39005 276 aa3.21□□□□□ -1.9
SEN1YLR430W RPL38P49167 78 aaKnown RBP3.2□□□□□ -1.9
SEN1YLR430W LEE1Q02799 301 aaKnown RBP3.2□□□□□ -1.9
SEN1YLR430W YJL027CP47063 138 aaPredicted RBP3.2□□□□□ -1.9
SEN1YLR430W YGL034CP53186 121 aa3.2□□□□□ -1.9
SEN1YLR430W YPR153WQ06537 140 aa3.2□□□□□ -1.9
SEN1YLR430W YGR121W-AQ3E816 71 aa3.2□□□□□ -1.9
SEN1YLR430W FPR1P20081 114 aaKnown RBP3.2□□□□□ -1.9
SEN1YLR430W COX17Q12287 69 aa3.19□□□□□ -1.9
SEN1YLR430W YGR035W-AQ45U48 73 aa3.19□□□□□ -1.9
SEN1YLR430W RPS23AP0CX29 145 aaKnown RBP3.19□□□□□ -1.9
SEN1YLR430W RPS23BP0CX30 145 aa3.19□□□□□ -1.9
SEN1YLR430W YEL008WP40001 126 aa3.19□□□□□ -1.9
SEN1YLR430W YEL045CP32616 141 aa3.19□□□□□ -1.9
SEN1YLR430W YBR200W-AQ3E755 54 aa3.19□□□□□ -1.9
SEN1YLR430W SED1Q01589 338 aa3.18□□□□□ -1.9
SEN1YLR430W YAL064WP39711 94 aa3.18□□□□□ -1.9
SEN1YLR430W RPR2P40571 144 aa3.18□□□□□ -1.9
SEN1YLR430W STT4P37297 1900 aa3.18□□□□□ -1.9
SEN1YLR430W RPS30AP0CX33 63 aaKnown RBP3.17□□□□□ -1.9
SEN1YLR430W RPS30BP0CX34 63 aaKnown RBP3.17□□□□□ -1.9
SEN1YLR430W MRPL39P36533 70 aa3.17□□□□□ -1.9
SEN1YLR430W POR2P40478 281 aa3.17□□□□□ -1.9
SEN1YLR430W YOL160WQ08321 113 aa3.17□□□□□ -1.9
SEN1YLR430W LAA1P39526 2014 aa3.17□□□□□ -1.9
SEN1YLR430W FYV5P25585 152 aa3.17□□□□□ -1.9
SEN1YLR430W YPS5P53057 165 aa3.17□□□□□ -1.9
SEN1YLR430W YDR114CQ04597 100 aa3.17□□□□□ -1.9
SEN1YLR430W YHL037CP38733 133 aa3.17□□□□□ -1.9
SEN1YLR430W YER135CP40082 130 aa3.16□□□□□ -1.9
SEN1YLR430W YDR524C-BQ3E6R4 66 aa3.16□□□□□ -1.9
SEN1YLR430W YCR043CP25361 127 aa3.16□□□□□ -1.9
SEN1YLR430W YIL086CP40503 102 aa3.16□□□□□ -1.9
SEN1YLR430W YOR034C-AQ3E735 80 aa3.16□□□□□ -1.9
SEN1YLR430W HUB1Q6Q546 73 aa3.16□□□□□ -1.9
SEN1YLR430W DDR48P18899 430 aaKnown RBP3.16□□□□□ -1.9
SEN1YLR430W COX14P39103 70 aa3.16□□□□□ -1.9
SEN1YLR430W YMR244WQ04018 355 aa3.16□□□□□ -1.9
SEN1YLR430W YOL166W-AQ8TGJ1 51 aa3.16□□□□□ -1.9
SEN1YLR430W YER084WP40057 128 aa3.15□□□□□ -1.9
SEN1YLR430W UTH1P36135 365 aa3.15□□□□□ -1.91
SEN1YLR430W HOT13P36078 116 aa3.14□□□□□ -1.91
SEN1YLR430W YIL102CP40488 101 aa3.14□□□□□ -1.91
SEN1YLR430W YOR032W-AQ8TGS1 66 aa3.14□□□□□ -1.91
SEN1YLR430W SPC1P46965 94 aa3.13□□□□□ -1.91
SEN1YLR430W YFR009W-AP0C5M9 85 aa3.13□□□□□ -1.91
SEN1YLR430W YGL015CP33199 130 aa3.12□□□□□ -1.91
SEN1YLR430W MRPL38P35996 138 aaPredicted RBP3.12□□□□□ -1.91
SEN1YLR430W SIP18P50263 79 aa3.12□□□□□ -1.91
SEN1YLR430W YCR095W-AQ3E787 52 aa3.12□□□□□ -1.91
SEN1YLR430W YLL006W-AQ3E814 58 aa3.12□□□□□ -1.91
SEN1YLR430W CCW12Q12127 133 aa3.11□□□□□ -1.91
SEN1YLR430W YMR105W-AQ8TGS8 64 aa3.11□□□□□ -1.91
SEN1YLR430W QCR10P37299 77 aa3.11□□□□□ -1.91
SEN1YLR430W COX23P38824 151 aa3.11□□□□□ -1.91
SEN1YLR430W LIP1Q03579 150 aa3.1□□□□□ -1.91
SEN1YLR430W YPR010C-AA5Z2X5 72 aa3.1□□□□□ -1.91
SEN1YLR430W PMP3P87284 55 aa3.1□□□□□ -1.91
SEN1YLR430W YGR045CP53229 120 aa3.09□□□□□ -1.91
SEN1YLR430W YOL085CQ99345 113 aa3.09□□□□□ -1.91
SEN1YLR430W TMC1Q08422 150 aaPredicted RBP3.08□□□□□ -1.92
SEN1YLR430W YIL046W-AQ3E7Z4 54 aa3.08□□□□□ -1.92
SEN1YLR430W YCR001WP25347 104 aa3.08□□□□□ -1.92
SEN1YLR430W YBR219CP38317 127 aa3.07□□□□□ -1.92
SEN1YLR430W YMR122W-AQ3E842 84 aa3.07□□□□□ -1.92
SEN1YLR430W SDH6Q3E785 79 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 124.8 ms