RNA–Protein interactions for RNA: YLR228C

ECM22, Transcript of Sterol regulatory element binding protein, yeast

Gene ECM22, Length 2,445 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ECM22	YLR228C	CTR2	P38865	189 aa		3.11	□□□□□ -1.91
ECM22	YLR228C	REE1	P40893	198 aa		3.11	□□□□□ -1.91
ECM22	YLR228C	IRA2	P19158	3079 aa		3.11	□□□□□ -1.91
ECM22	YLR228C	YHR213W	P0CI67	198 aa		3.1	□□□□□ -1.91
ECM22	YLR228C	SPS100	P13130	326 aa		3.1	□□□□□ -1.91
ECM22	YLR228C	SPT4	P32914	102 aa	Predicted RBP	3.1	□□□□□ -1.91
ECM22	YLR228C	YKR073C	P36153	106 aa		3.1	□□□□□ -1.91
ECM22	YLR228C	KRE9	P39005	276 aa		3.1	□□□□□ -1.91
ECM22	YLR228C	ATP20	Q12233	115 aa		3.1	□□□□□ -1.91
ECM22	YLR228C	YOR034C-A	Q3E735	80 aa		3.1	□□□□□ -1.91
ECM22	YLR228C	RPL16A	P26784	199 aa	Known RBP	3.1	□□□□□ -1.91
ECM22	YLR228C	ICS3	P47034	131 aa		3.1	□□□□□ -1.91
ECM22	YLR228C	YNL046W	P53956	172 aa		3.1	□□□□□ -1.91
ECM22	YLR228C	YMR295C	Q03559	197 aa		3.1	□□□□□ -1.91
ECM22	YLR228C	GAT4	P40569	121 aa		3.09	□□□□□ -1.91
ECM22	YLR228C	YFL015C	P43578	164 aa		3.09	□□□□□ -1.91
ECM22	YLR228C	IMP2	P46972	177 aa		3.09	□□□□□ -1.91
ECM22	YLR228C	EDC1	P53080	175 aa	Predicted RBP	3.09	□□□□□ -1.91
ECM22	YLR228C	YNL234W	P53857	426 aa		3.09	□□□□□ -1.91
ECM22	YLR228C	IRC21	Q04772	201 aa		3.09	□□□□□ -1.92
ECM22	YLR228C	YOR376W-A	Q3E805	51 aa		3.09	□□□□□ -1.92
ECM22	YLR228C	VPS13	Q07878	3144 aa		3.08	□□□□□ -1.92
ECM22	YLR228C	SHU1	P38751	150 aa		3.08	□□□□□ -1.92
ECM22	YLR228C	PEX17	P40155	199 aa		3.08	□□□□□ -1.92
ECM22	YLR228C	YDL009C	Q12210	107 aa		3.08	□□□□□ -1.92
ECM22	YLR228C	RRT1	P38192	103 aa		3.08	□□□□□ -1.92
ECM22	YLR228C	YOR381W-A	Q3E804	55 aa		3.08	□□□□□ -1.92
ECM22	YLR228C	FMP27	Q06179	2628 aa		3.07	□□□□□ -1.92
ECM22	YLR228C	SMD1	Q02260	146 aa	Predicted RBP	3.07	□□□□□ -1.92
ECM22	YLR228C	FAS1	P07149	2051 aa	Known RBP	3.07	□□□□□ -1.92
ECM22	YLR228C	RPL26A	P05743	127 aa	Known RBP	3.07	□□□□□ -1.92
ECM22	YLR228C	YKR045C	P36138	183 aa		3.07	□□□□□ -1.92
ECM22	YLR228C	MIG3	P39943	394 aa		3.07	□□□□□ -1.92
ECM22	YLR228C	RSM18	P40033	138 aa		3.07	□□□□□ -1.92
ECM22	YLR228C	PGU1	P47180	361 aa		3.07	□□□□□ -1.92
ECM22	YLR228C	RPL26B	P53221	127 aa	Known RBP	3.07	□□□□□ -1.92
ECM22	YLR228C	DIF1	O13577	133 aa		3.06	□□□□□ -1.92
ECM22	YLR228C	YJR107C-A	P0CT86	78 aa		3.06	□□□□□ -1.92
ECM22	YLR228C	ARC15	P40518	154 aa	RIP-Chip data	3.06	□□□□□ -1.92	not detected
ECM22	YLR228C	YGL034C	P53186	121 aa		3.06	□□□□□ -1.92
ECM22	YLR228C	YDR274C	P87283	123 aa		3.06	□□□□□ -1.92
ECM22	YLR228C	RGM1	Q00453	211 aa		3.06	□□□□□ -1.92
ECM22	YLR228C	YOL160W	Q08321	113 aa		3.06	□□□□□ -1.92
ECM22	YLR228C	NOP10	Q6Q547	58 aa	Predicted RBP	3.06	□□□□□ -1.92
ECM22	YLR228C	FPR1	P20081	114 aa	Known RBP	3.05	□□□□□ -1.92
ECM22	YLR228C	YJL027C	P47063	138 aa	Predicted RBP	3.05	□□□□□ -1.92
ECM22	YLR228C	YJR146W	P47174	117 aa		3.05	□□□□□ -1.92
ECM22	YLR228C	SRL1	Q08673	210 aa		3.05	□□□□□ -1.92
ECM22	YLR228C	YAL065C	O13511	128 aa		3.05	□□□□□ -1.92
ECM22	YLR228C	YER084W	P40057	128 aa		3.05	□□□□□ -1.92
ECM22	YLR228C	RPL38	P49167	78 aa	Known RBP	3.05	□□□□□ -1.92
ECM22	YLR228C	QCR8	P08525	94 aa		3.04	□□□□□ -1.92
ECM22	YLR228C	YGL088W	P53151	121 aa		3.04	□□□□□ -1.92
ECM22	YLR228C	RNH203	Q12338	110 aa		3.04	□□□□□ -1.92
ECM22	YLR228C	RPB9	P27999	122 aa		3.03	□□□□□ -1.92
ECM22	YLR228C	YIL086C	P40503	102 aa		3.03	□□□□□ -1.92
ECM22	YLR228C	LEE1	Q02799	301 aa	Known RBP	3.03	□□□□□ -1.92
ECM22	YLR228C	YLR162W	Q06235	118 aa		3.03	□□□□□ -1.92
ECM22	YLR228C	YOL085C	Q99345	113 aa		3.03	□□□□□ -1.92
ECM22	YLR228C	YHL005C	P38752	130 aa		3.03	□□□□□ -1.92
ECM22	YLR228C	YGR025W	P53216	100 aa		3.03	□□□□□ -1.92
ECM22	YLR228C	SPG4	Q04438	115 aa		3.03	□□□□□ -1.92
ECM22	YLR228C	CRC1	Q12289	327 aa		3.03	□□□□□ -1.92
ECM22	YLR228C	YOR314W	Q12506	109 aa		3.03	□□□□□ -1.92
ECM22	YLR228C	YGR121W-A	Q3E816	71 aa		3.03	□□□□□ -1.92
ECM22	YLR228C	YBR144C	P34215	104 aa		3.02	□□□□□ -1.93
ECM22	YLR228C	TDA2	P40045	126 aa		3.01	□□□□□ -1.93
ECM22	YLR228C	YIR020C	P40575	100 aa		3.01	□□□□□ -1.93
ECM22	YLR228C	YFR035C	P43608	114 aa		3.01	□□□□□ -1.93
ECM22	YLR228C	YMR122C	Q03879	124 aa		3.01	□□□□□ -1.93
ECM22	YLR228C	YBR200W-A	Q3E755	54 aa		3.01	□□□□□ -1.93
ECM22	YLR228C	YMR105W-A	Q8TGS8	64 aa		3.01	□□□□□ -1.93
ECM22	YLR228C	YLR236C	A0A023PZG4	107 aa		3.01	□□□□□ -1.93
ECM22	YLR228C	HHF1	P02309	103 aa	Known RBP	3.01	□□□□□ -1.93
ECM22	YLR228C	YEL008W	P40001	126 aa		3.01	□□□□□ -1.93
ECM22	YLR228C	MPC3	P53311	146 aa		3.01	□□□□□ -1.93
ECM22	YLR228C	SED1	Q01589	338 aa		3.01	□□□□□ -1.93
ECM22	YLR228C	OST5	Q92316	86 aa		3.01	□□□□□ -1.93
ECM22	YLR228C	RPL36B	O14455	100 aa	Known RBP	3	□□□□□ -1.93
ECM22	YLR228C	RPL36A	P05745	100 aa	Predicted RBP	3	□□□□□ -1.93
ECM22	YLR228C	RPS23A	P0CX29	145 aa	Known RBP	3	□□□□□ -1.93
ECM22	YLR228C	RPS23B	P0CX30	145 aa		3	□□□□□ -1.93
ECM22	YLR228C	YIL046W-A	Q3E7Z4	54 aa		3	□□□□□ -1.93
ECM22	YLR228C	RPL39	P04650	51 aa		3	□□□□□ -1.93
ECM22	YLR228C	RPS30A	P0CX33	63 aa	Known RBP	3	□□□□□ -1.93
ECM22	YLR228C	RPS30B	P0CX34	63 aa	Known RBP	3	□□□□□ -1.93
ECM22	YLR228C	SIP18	P50263	79 aa		3	□□□□□ -1.93
ECM22	YLR228C	YBR126W-A	Q8TGU7	68 aa		3	□□□□□ -1.93
ECM22	YLR228C	MRPL39	P36533	70 aa		2.99	□□□□□ -1.93
ECM22	YLR228C	YDR182W-A	Q3E796	67 aa		2.99	□□□□□ -1.93
ECM22	YLR228C	YOL166W-A	Q8TGJ1	51 aa		2.99	□□□□□ -1.93
ECM22	YLR228C	YER188C-A	P0C0V2	99 aa		2.99	□□□□□ -1.93
ECM22	YLR228C	MRPL38	P35996	138 aa	Predicted RBP	2.99	□□□□□ -1.93
ECM22	YLR228C	HOT13	P36078	116 aa		2.99	□□□□□ -1.93
ECM22	YLR228C	ATP18	P81450	59 aa		2.99	□□□□□ -1.93
ECM22	YLR228C	SPO24	Q3E752	67 aa		2.99	□□□□□ -1.93
ECM22	YLR228C	YOR020W-A	Q3E824	90 aa		2.99	□□□□□ -1.93
ECM22	YLR228C	YGR035W-A	Q45U48	73 aa		2.99	□□□□□ -1.93
ECM22	YLR228C	YML100W-A	Q8TGT0	57 aa		2.99	□□□□□ -1.93
ECM22	YLR228C	YEL045C	P32616	141 aa		2.98	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 49 ms