RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	FIT2	Q08906	153 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	WIP1	Q2V2P8	89 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	VPS55	P47111	140 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	SED1	Q01589	338 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	RAV2	Q03956	351 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	YMR253C	Q04835	414 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	YMR320W	Q04897	101 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	HPA2	Q06592	156 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	YGL194C-A	Q2V2P6	80 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	YIL046W-A	Q3E7Z4	54 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	AHT1	P29589	182 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	CSH1	P38287	376 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	SPI1	P40092	148 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	YIR020C	P40575	100 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	CWP2	P43497	92 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	YNL190W	P53872	204 aa		0.92	□□□□□ -2.26
SMC4	YLR086W	VAR1	P02381	398 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	UGX2	P32772	223 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	HUG1	Q6Q5K6	68 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	YML100W-A	Q8TGT0	57 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	YCL001W-B	Q96VH2	84 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	RPL43A	P0CX25	92 aa	Known RBP	0.91	□□□□□ -2.26
SMC4	YLR086W	RPL43B	P0CX26	92 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	YHP1	Q04116	353 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	YLR296W	Q05898	108 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	YLR307C-A	Q3E825	87 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	YMR122W-A	Q3E842	84 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	RTC6	O14464	93 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	RPL29	P05747	59 aa	Predicted RBP	0.91	□□□□□ -2.26
SMC4	YLR086W	PRE1	P22141	198 aa	Known RBP	0.91	□□□□□ -2.26
SMC4	YLR086W	YPL073C	P40323	161 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	MGR2	Q02889	113 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	YMR252C	Q04814	134 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	YOS1	Q3E834	85 aa		0.91	□□□□□ -2.26
SMC4	YLR086W	YGR269W	P40326	108 aa		0.9	□□□□□ -2.26
SMC4	YLR086W	SPG1	P50088	95 aa		0.9	□□□□□ -2.26
SMC4	YLR086W	YLR194C	Q05777	254 aa		0.9	□□□□□ -2.26
SMC4	YLR086W	RRT7	Q07829	113 aa		0.9	□□□□□ -2.26
SMC4	YLR086W	VAM10	Q08474	114 aa		0.9	□□□□□ -2.26
SMC4	YLR086W	UBR1	P19812	1950 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	ECM12	O13529	151 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	YCL042W	P25572	119 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	AIM19	P40502	157 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	YFL065C	P43539	102 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	YGL230C	P53074	147 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	RSM19	P53733	91 aa	Predicted RBP	0.9	□□□□□ -2.27
SMC4	YLR086W	YHR007C-A	Q07074	71 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	YIL102C-A	Q2V2P5	75 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	YFL041W-A	Q3E817	63 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	YLR157W-D	P0CE99	70 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	PBI2	P0CT04	75 aa	Known RBP	0.9	□□□□□ -2.27
SMC4	YLR086W	FIP1	P45976	327 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	COX12	Q01519	83 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	YOL014W	Q08110	124 aa		0.9	□□□□□ -2.27
SMC4	YLR086W	POC4	Q12245	148 aa	Predicted RBP	0.9	□□□□□ -2.27
SMC4	YLR086W	ATX1	P38636	73 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	YHL018W	P38744	120 aa	Predicted RBP	0.89	□□□□□ -2.27
SMC4	YLR086W	SHU1	P38751	150 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	DCV1	P43595	202 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	YMR007W	Q03675	126 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	YDR278C	Q05612	105 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	LSM6	Q06406	86 aa	Known RBP	0.89	□□□□□ -2.27
SMC4	YLR086W	INO4	P13902	151 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	YKR045C	P36138	183 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	RPC10	P40422	70 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	DYN2	Q02647	92 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	YPR013C	Q12145	317 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	Q0032	Q9ZZX7	96 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	FYV5	P25585	152 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	LCL1	Q02786	101 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	YSY6	P38374	65 aa		0.89	□□□□□ -2.27
SMC4	YLR086W	YHR213W	P0CI67	198 aa		0.88	□□□□□ -2.27
SMC4	YLR086W	COX7	P10174	60 aa		0.88	□□□□□ -2.27
SMC4	YLR086W	RPL14A	P36105	138 aa	Known RBP	0.88	□□□□□ -2.27
SMC4	YLR086W	YBR219C	P38317	127 aa		0.88	□□□□□ -2.27
SMC4	YLR086W	RPL14B	P38754	138 aa	Known RBP	0.88	□□□□□ -2.27
SMC4	YLR086W	SNU13	P39990	126 aa	Known RBP	0.88	□□□□□ -2.27
SMC4	YLR086W	ICY1	Q04329	127 aa		0.88	□□□□□ -2.27
SMC4	YLR086W	YCL048W-A	Q2V2Q2	79 aa		0.88	□□□□□ -2.27
SMC4	YLR086W	Q0297	Q9ZZV8	51 aa		0.88	□□□□□ -2.27
SMC4	YLR086W	AQY2	P0CD90	149 aa		0.88	□□□□□ -2.27
SMC4	YLR086W	NAT5	Q08689	176 aa		0.88	□□□□□ -2.27
SMC4	YLR086W	YPL261C	Q08976	102 aa		0.88	□□□□□ -2.27
SMC4	YLR086W	COX8	P04039	78 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	UBC5	P15732	148 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	HUR1	P45820	110 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	YHR086W-A	Q3E746	53 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	YBR200W-A	Q3E755	54 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	YMR105W-A	Q8TGS8	64 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	RPL39	P04650	51 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	UBC4	P15731	148 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	YEL067C	P39978	195 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	IMP2	P46972	177 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	AIM11	P87275	137 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	YDR029W	Q12111	104 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	YNL042W-B	Q3E7Z2	85 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	HUB1	Q6Q546	73 aa		0.87	□□□□□ -2.27
SMC4	YLR086W	FAS1	P07149	2051 aa	Known RBP	0.87	□□□□□ -2.27
SMC4	YLR086W	BRR2	P32639	2163 aa	Known RBP	0.87	□□□□□ -2.27
SMC4	YLR086W	DDR2	P89113	61 aa		0.87	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 85.5 ms