RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W ENV10Q99382 181 aa0.84□□□□□ -2.27
SEC28YIL076W FMP49A0A023PZB3 126 aa0.83□□□□□ -2.28
SEC28YIL076W PAU19P0CE85 124 aa0.83□□□□□ -2.28
SEC28YIL076W PAU21P0CE86 164 aa0.83□□□□□ -2.28
SEC28YIL076W PAU22P0CE87 164 aa0.83□□□□□ -2.28
SEC28YIL076W HMRA1P0CY11 126 aa0.83□□□□□ -2.28
SEC28YIL076W PAU3P25610 124 aa0.83□□□□□ -2.28
SEC28YIL076W SHG1P38337 142 aa0.83□□□□□ -2.28
SEC28YIL076W RPB11P38902 120 aa0.83□□□□□ -2.28
SEC28YIL076W YEL008WP40001 126 aa0.83□□□□□ -2.28
SEC28YIL076W PAU15P40585 124 aa0.83□□□□□ -2.28
SEC28YIL076W YGL193CP53097 103 aa0.83□□□□□ -2.28
SEC28YIL076W THG1P53215 237 aaKnown RBP0.83□□□□□ -2.28
SEC28YIL076W MGR2Q02889 113 aa0.83□□□□□ -2.28
SEC28YIL076W YDL241WQ07738 123 aa0.83□□□□□ -2.28
SEC28YIL076W CMC4Q3E7A9 73 aa0.83□□□□□ -2.28
SEC28YIL076W ECM12O13529 151 aa0.82□□□□□ -2.28
SEC28YIL076W PFY1P07274 126 aa0.82□□□□□ -2.28
SEC28YIL076W HYP2P23301 157 aaKnown RBP0.82□□□□□ -2.28
SEC28YIL076W PAU7P39545 55 aa0.82□□□□□ -2.28
SEC28YIL076W PAU5P43575 122 aa0.82□□□□□ -2.28
SEC28YIL076W TOS6P48560 102 aa0.82□□□□□ -2.28
SEC28YIL076W YGL149WP53116 101 aa0.82□□□□□ -2.28
SEC28YIL076W YMR295CQ03559 197 aa0.82□□□□□ -2.28
SEC28YIL076W NAT3Q06504 195 aa0.82□□□□□ -2.28
SEC28YIL076W YFR032C-BQ8TGU2 87 aa0.82□□□□□ -2.28
SEC28YIL076W NHP6AP11632 93 aaKnown RBP0.81□□□□□ -2.28
SEC28YIL076W ATP15P21306 62 aa0.81□□□□□ -2.28
SEC28YIL076W PRE1P22141 198 aaKnown RBP0.81□□□□□ -2.28
SEC28YIL076W PAU16P35994 123 aa0.81□□□□□ -2.28
SEC28YIL076W PAM17P36147 197 aa0.81□□□□□ -2.28
SEC28YIL076W YAR029WP39549 74 aa0.81□□□□□ -2.28
SEC28YIL076W YER085CP40058 173 aa0.81□□□□□ -2.28
SEC28YIL076W SNN1P48232 102 aa0.81□□□□□ -2.28
SEC28YIL076W JAC1P53193 184 aa0.81□□□□□ -2.28
SEC28YIL076W YIL014C-AQ02598 104 aa0.81□□□□□ -2.28
SEC28YIL076W YGL041C-BQ3E750 60 aa0.81□□□□□ -2.28
SEC28YIL076W YOR008C-AQ3E7B9 74 aa0.81□□□□□ -2.28
SEC28YIL076W POR1P04840 283 aaKnown RBP0.8□□□□□ -2.28
SEC28YIL076W UBC4P15731 148 aa0.8□□□□□ -2.28
SEC28YIL076W CNB1P25296 175 aa0.8□□□□□ -2.28
SEC28YIL076W VMA7P39111 118 aa0.8□□□□□ -2.28
SEC28YIL076W YPL073CP40323 161 aa0.8□□□□□ -2.28
SEC28YIL076W UBC12P52491 188 aa0.8□□□□□ -2.28
SEC28YIL076W YDR042CQ03205 200 aa0.8□□□□□ -2.28
SEC28YIL076W PLP1Q04004 230 aa0.8□□□□□ -2.28
SEC28YIL076W ATP14Q12349 124 aa0.8□□□□□ -2.28
SEC28YIL076W VMA9Q3E7B6 73 aa0.8□□□□□ -2.28
SEC28YIL076W YNR034W-AQ3E841 98 aa0.8□□□□□ -2.28
SEC28YIL076W MBF1O14467 151 aaKnown RBP0.79□□□□□ -2.28
SEC28YIL076W SEC4P07560 215 aaKnown RBP0.79□□□□□ -2.28
SEC28YIL076W HSP10P38910 106 aa0.79□□□□□ -2.28
SEC28YIL076W MVB12P42939 101 aa0.79□□□□□ -2.28
SEC28YIL076W CWP2P43497 92 aa0.79□□□□□ -2.28
SEC28YIL076W PKR1Q03880 122 aaKnown RBP0.79□□□□□ -2.28
SEC28YIL076W YKL023C-AQ2V2P3 75 aa0.79□□□□□ -2.28
SEC28YIL076W COA3Q3E7B2 85 aa0.79□□□□□ -2.28
SEC28YIL076W YGR121W-AQ3E816 71 aa0.79□□□□□ -2.28
SEC28YIL076W KTI11Q3E840 82 aa0.79□□□□□ -2.28
SEC28YIL076W RPL29P05747 59 aaPredicted RBP0.78□□□□□ -2.28
SEC28YIL076W YBL039W-BP0C268 59 aa0.78□□□□□ -2.28
SEC28YIL076W YDL022C-AP0C5L6 82 aa0.78□□□□□ -2.28
SEC28YIL076W GSP1P32835 219 aaKnown RBP0.78□□□□□ -2.28
SEC28YIL076W YFL019CP43576 117 aa0.78□□□□□ -2.28
SEC28YIL076W SPG1P50088 95 aa0.78□□□□□ -2.28
SEC28YIL076W APS2Q00381 147 aa0.78□□□□□ -2.28
SEC28YIL076W CMC2Q3E7A4 109 aa0.78□□□□□ -2.28
SEC28YIL076W YPR014CQ6B0W2 109 aa0.78□□□□□ -2.28
SEC28YIL076W KSH1Q8TGJ3 72 aa0.78□□□□□ -2.28
SEC28YIL076W Q0032Q9ZZX7 96 aa0.78□□□□□ -2.28
SEC28YIL076W RPL28P02406 149 aaKnown RBP0.77□□□□□ -2.29
SEC28YIL076W YER039C-AP0CD97 72 aa0.77□□□□□ -2.29
SEC28YIL076W HMRA2P0CY13 119 aa0.77□□□□□ -2.29
SEC28YIL076W SHU1P38751 150 aa0.77□□□□□ -2.29
SEC28YIL076W MPC3P53311 146 aa0.77□□□□□ -2.29
SEC28YIL076W MRPS12P53732 153 aa0.77□□□□□ -2.29
SEC28YIL076W YNL190WP53872 204 aa0.77□□□□□ -2.29
SEC28YIL076W RPS22BQ3E7Y3 130 aaKnown RBP0.77□□□□□ -2.29
SEC28YIL076W SRB6P32570 121 aa0.76□□□□□ -2.29
SEC28YIL076W ATG8P38182 117 aaRIP-Chip data0.76□□□□□ -2.29not detected
SEC28YIL076W ERV14P53173 138 aa0.76□□□□□ -2.29
SEC28YIL076W HPA2Q06592 156 aa0.76□□□□□ -2.29
SEC28YIL076W WIP1Q2V2P8 89 aa0.76□□□□□ -2.29
SEC28YIL076W GSP2P32836 220 aaKnown RBP0.75□□□□□ -2.29
SEC28YIL076W YBR027CP38220 110 aa0.75□□□□□ -2.29
SEC28YIL076W VMA21P41806 77 aa0.75□□□□□ -2.29
SEC28YIL076W AIM11P87275 137 aa0.75□□□□□ -2.29
SEC28YIL076W DDR2P89113 61 aa0.75□□□□□ -2.29
SEC28YIL076W YMR103CQ04436 120 aa0.75□□□□□ -2.29
SEC28YIL076W YNL042W-BQ3E7Z2 85 aa0.75□□□□□ -2.29
SEC28YIL076W YLL006W-AQ3E814 58 aa0.75□□□□□ -2.29
SEC28YIL076W HAP3P13434 144 aa0.74□□□□□ -2.29
SEC28YIL076W YKR041WP36134 250 aa0.74□□□□□ -2.29
SEC28YIL076W MRPL24P36525 258 aaPredicted RBP0.74□□□□□ -2.29
SEC28YIL076W YNL122CP53921 115 aaPredicted RBP0.74□□□□□ -2.29
SEC28YIL076W ICY1Q04329 127 aa0.74□□□□□ -2.29
SEC28YIL076W FYV5P25585 152 aa0.73□□□□□ -2.29
SEC28YIL076W MRPL11P36521 249 aaPredicted RBP0.73□□□□□ -2.29
SEC28YIL076W YHL018WP38744 120 aaPredicted RBP0.73□□□□□ -2.29
SEC28YIL076W YHL005CP38752 130 aa0.73□□□□□ -2.29
Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms