RNA–Protein interactions for RNA: YGR271C-A

EFG1, Essential protein required for maturation of 18S rRNA, yeastyeast

Gene EFG1, Length 702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
EFG1YGR271C-A FPR2P32472 135 aa1.59□□□□□ -2.15
EFG1YGR271C-A PDX3P38075 228 aaKnown RBP1.59□□□□□ -2.15
EFG1YGR271C-A SWM2P40342 146 aa1.59□□□□□ -2.15
EFG1YGR271C-A PAU23Q07987 124 aa1.59□□□□□ -2.15
EFG1YGR271C-A PAU17Q12370 124 aa1.59□□□□□ -2.15
EFG1YGR271C-A YDR010CQ12426 110 aa1.59□□□□□ -2.15
EFG1YGR271C-A COX19Q3E731 98 aa1.59□□□□□ -2.15
EFG1YGR271C-A XRN1P22147 1528 aaKnown RBP1.59□□□□□ -2.16
EFG1YGR271C-A SHU1P38751 150 aa1.58□□□□□ -2.16
EFG1YGR271C-A MLP1Q02455 1875 aaKnown RBP1.58□□□□□ -2.16
EFG1YGR271C-A TY1B-DR1Q03855 1755 aa1.57□□□□□ -2.16
EFG1YGR271C-A TY1B-DR3Q99231 1755 aa1.57□□□□□ -2.16
EFG1YGR271C-A TCB3Q03640 1545 aaKnown RBP1.57□□□□□ -2.16
EFG1YGR271C-A YJR128WP47162 119 aa1.57□□□□□ -2.16
EFG1YGR271C-A YMR007WQ03675 126 aa1.57□□□□□ -2.16
EFG1YGR271C-A DOP1Q03921 1698 aa1.57□□□□□ -2.16
EFG1YGR271C-A RPO31P04051 1460 aa1.56□□□□□ -2.16
EFG1YGR271C-A LAA1P39526 2014 aa1.56□□□□□ -2.16
EFG1YGR271C-A YAL065CO13511 128 aa1.56□□□□□ -2.16
EFG1YGR271C-A YFL041W-AQ3E817 63 aa1.56□□□□□ -2.16
EFG1YGR271C-A NOP10Q6Q547 58 aaPredicted RBP1.56□□□□□ -2.16
EFG1YGR271C-A YRF1-1P0CX20 1796 aa1.55□□□□□ -2.16
EFG1YGR271C-A YRF1-5P0CX21 1796 aa1.55□□□□□ -2.16
EFG1YGR271C-A YRF1-8P0CX22 1796 aa1.55□□□□□ -2.16
EFG1YGR271C-A QCR9P22289 66 aa1.55□□□□□ -2.16
EFG1YGR271C-A HHY1P39982 102 aa1.55□□□□□ -2.16
EFG1YGR271C-A SLH1P53327 1967 aaKnown RBP1.55□□□□□ -2.16
EFG1YGR271C-A SCC2Q04002 1493 aa1.55□□□□□ -2.16
EFG1YGR271C-A YFR010W-AP0C5N0 62 aa1.54□□□□□ -2.16
EFG1YGR271C-A YIL156W-BQ2V2P4 73 aa1.54□□□□□ -2.16
EFG1YGR271C-A YNL042W-BQ3E7Z2 85 aa1.54□□□□□ -2.16
EFG1YGR271C-A UFD4P33202 1483 aa1.54□□□□□ -2.16
EFG1YGR271C-A TIM12P32830 109 aa1.53□□□□□ -2.16
EFG1YGR271C-A URB1P34241 1764 aaKnown RBP1.53□□□□□ -2.16
EFG1YGR271C-A YHR173CP38864 112 aa1.53□□□□□ -2.16
EFG1YGR271C-A YGR121W-AQ3E816 71 aa1.53□□□□□ -2.16
EFG1YGR271C-A YHR213W-BQ8TGK1 99 aa1.53□□□□□ -2.16
EFG1YGR271C-A SMC4Q12267 1418 aa1.52□□□□□ -2.17
EFG1YGR271C-A SSS1P35179 80 aa1.52□□□□□ -2.17
EFG1YGR271C-A YOL131WQ08270 108 aa1.52□□□□□ -2.17
EFG1YGR271C-A YMR141CP40211 102 aa1.51□□□□□ -2.17
EFG1YGR271C-A HUA1P40325 198 aa1.51□□□□□ -2.17
EFG1YGR271C-A YBR201C-AQ2V2Q3 67 aa1.51□□□□□ -2.17
EFG1YGR271C-A YMR122W-AQ3E842 84 aa1.51□□□□□ -2.17
EFG1YGR271C-A FAS2P19097 1887 aaKnown RBP1.5□□□□□ -2.17
EFG1YGR271C-A Q0032Q9ZZX7 96 aa1.5□□□□□ -2.17
EFG1YGR271C-A YGR035W-AQ45U48 73 aa1.49□□□□□ -2.17
EFG1YGR271C-A MYO4P32492 1471 aa1.48□□□□□ -2.17
EFG1YGR271C-A ECM29P38737 1868 aa1.48□□□□□ -2.17
EFG1YGR271C-A DNF1P32660 1571 aa1.47□□□□□ -2.17
EFG1YGR271C-A COX7P10174 60 aa1.47□□□□□ -2.17
EFG1YGR271C-A YNL198CP40166 100 aa1.47□□□□□ -2.17
EFG1YGR271C-A ATP18P81450 59 aa1.47□□□□□ -2.17
EFG1YGR271C-A SGF11Q03067 99 aa1.47□□□□□ -2.17
EFG1YGR271C-A YOR034C-AQ3E735 80 aa1.47□□□□□ -2.17
EFG1YGR271C-A YBR072C-AQ3E794 53 aa1.47□□□□□ -2.17
EFG1YGR271C-A VPS15P22219 1454 aa1.47□□□□□ -2.17
EFG1YGR271C-A YDL022C-AP0C5L6 82 aa1.46□□□□□ -2.18
EFG1YGR271C-A PAU7P39545 55 aa1.46□□□□□ -2.18
EFG1YGR271C-A SPI1P40092 148 aa1.46□□□□□ -2.18
EFG1YGR271C-A VMA9Q3E7B6 73 aa1.46□□□□□ -2.18
EFG1YGR271C-A TY1B-LR3P0C2I6 1755 aaKnown RBP1.46□□□□□ -2.18
EFG1YGR271C-A TY1B-PR3P0C2J1 1755 aaKnown RBP1.46□□□□□ -2.18
EFG1YGR271C-A BRR2P32639 2163 aaKnown RBP1.45□□□□□ -2.18
EFG1YGR271C-A DNF3Q12674 1656 aa1.45□□□□□ -2.18
EFG1YGR271C-A IQG1Q12280 1495 aa1.44□□□□□ -2.18
EFG1YGR271C-A ERI1P62651 68 aaKnown RBP1.44□□□□□ -2.18
EFG1YGR271C-A YOL097W-AQ3E7Y9 61 aa1.44□□□□□ -2.18
EFG1YGR271C-A TY1B-GR3Q12316 1755 aa1.44□□□□□ -2.18
EFG1YGR271C-A TY1B-ORQ92393 1755 aa1.44□□□□□ -2.18
EFG1YGR271C-A YSY6P38374 65 aa1.43□□□□□ -2.18
EFG1YGR271C-A RPL38P49167 78 aaKnown RBP1.43□□□□□ -2.18
EFG1YGR271C-A YIL102C-AQ2V2P5 75 aa1.43□□□□□ -2.18
EFG1YGR271C-A RRP5Q05022 1729 aaKnown RBP1.43□□□□□ -2.18
EFG1YGR271C-A IML1P47170 1584 aa1.42□□□□□ -2.18
EFG1YGR271C-A TY1B-DR5P0C2I2 1755 aa1.42□□□□□ -2.18
EFG1YGR271C-A TY1B-DR6P0C2I3 1755 aa1.42□□□□□ -2.18
EFG1YGR271C-A TY1B-LR2P0C2I5 1755 aa1.42□□□□□ -2.18
EFG1YGR271C-A TY1B-PR1P0C2I9 1755 aaKnown RBP1.42□□□□□ -2.18
EFG1YGR271C-A TY2B-CP25384 1770 aa1.42□□□□□ -2.18
EFG1YGR271C-A TY1B-JR1P47098 1755 aa1.42□□□□□ -2.18
EFG1YGR271C-A TY1B-ML2Q03434 1755 aaKnown RBP1.42□□□□□ -2.18
EFG1YGR271C-A TY1B-ER1Q03612 1755 aa1.42□□□□□ -2.18
EFG1YGR271C-A TY1B-ML1Q04711 1755 aaKnown RBP1.42□□□□□ -2.18
EFG1YGR271C-A TY1B-GR2Q12269 1755 aa1.42□□□□□ -2.18
EFG1YGR271C-A TY1B-OLQ12273 1755 aa1.42□□□□□ -2.18
EFG1YGR271C-A TY1B-PLQ12414 1755 aaKnown RBP1.42□□□□□ -2.18
EFG1YGR271C-A TY2B-DR1Q12472 1770 aa1.42□□□□□ -2.18
EFG1YGR271C-A ATP17Q06405 101 aa1.42□□□□□ -2.18
EFG1YGR271C-A SDH6Q3E785 79 aa1.42□□□□□ -2.18
EFG1YGR271C-A YKL018C-AQ3E7A7 99 aa1.42□□□□□ -2.18
EFG1YGR271C-A SEC16P48415 2195 aaKnown RBP1.42□□□□□ -2.18
EFG1YGR271C-A UTP10P42945 1769 aaKnown RBP1.42□□□□□ -2.18
EFG1YGR271C-A RPL43AP0CX25 92 aaKnown RBP1.41□□□□□ -2.18
EFG1YGR271C-A RPL43BP0CX26 92 aa1.41□□□□□ -2.18
EFG1YGR271C-A RPC10P40422 70 aa1.41□□□□□ -2.18
EFG1YGR271C-A YIL134C-AQ45U18 67 aa1.41□□□□□ -2.18
EFG1YGR271C-A YOR032W-AQ8TGS1 66 aa1.41□□□□□ -2.18
EFG1YGR271C-A PMD1P32634 1753 aa1.41□□□□□ -2.18
EFG1YGR271C-A MOT1P32333 1867 aa1.41□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 27.1 ms