RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeastyeast

Gene PEX4, Length 552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX4YGR133W VPS55P47111 140 aa1.81□□□□□ -2.12
PEX4YGR133W YGR219WP53307 113 aa1.81□□□□□ -2.12
PEX4YGR133W COX12Q01519 83 aa1.81□□□□□ -2.12
PEX4YGR133W SED1Q01589 338 aa1.81□□□□□ -2.12
PEX4YGR133W YOL160WQ08321 113 aa1.81□□□□□ -2.12
PEX4YGR133W IRC23Q08416 157 aa1.81□□□□□ -2.12
PEX4YGR133W YDL009CQ12210 107 aa1.81□□□□□ -2.12
PEX4YGR133W YDR119W-AQ2V2P9 66 aa1.81□□□□□ -2.12
PEX4YGR133W YHR139C-AO13536 103 aa1.8□□□□□ -2.12
PEX4YGR133W RPL2AP0CX45 254 aaKnown RBP1.8□□□□□ -2.12
PEX4YGR133W RPL2BP0CX46 254 aaKnown RBP1.8□□□□□ -2.12
PEX4YGR133W YHL042WP38729 150 aa1.8□□□□□ -2.12
PEX4YGR133W CTR2P38865 189 aa1.8□□□□□ -2.12
PEX4YGR133W POR2P40478 281 aa1.8□□□□□ -2.12
PEX4YGR133W AIM19P40502 157 aa1.8□□□□□ -2.12
PEX4YGR133W KEG1P43614 200 aa1.8□□□□□ -2.12
PEX4YGR133W YNL190WP53872 204 aa1.8□□□□□ -2.12
PEX4YGR133W YNL046WP53956 172 aa1.8□□□□□ -2.12
PEX4YGR133W PRM7Q12459 698 aa1.8□□□□□ -2.12
PEX4YGR133W KSH1Q8TGJ3 72 aa1.8□□□□□ -2.12
PEX4YGR133W YCL021W-AQ96VH3 125 aa1.8□□□□□ -2.12
PEX4YGR133W RPL16AP26784 199 aaKnown RBP1.79□□□□□ -2.12
PEX4YGR133W SMP1P38128 452 aa1.79□□□□□ -2.12
PEX4YGR133W SVP26P38869 228 aa1.79□□□□□ -2.12
PEX4YGR133W YAR029WP39549 74 aa1.79□□□□□ -2.12
PEX4YGR133W HUR1P45820 110 aa1.79□□□□□ -2.12
PEX4YGR133W YJR146WP47174 117 aa1.79□□□□□ -2.12
PEX4YGR133W MRPS12P53732 153 aa1.79□□□□□ -2.12
PEX4YGR133W PBA1Q05778 276 aa1.79□□□□□ -2.12
PEX4YGR133W PBP4Q07362 185 aaKnown RBP1.79□□□□□ -2.12
PEX4YGR133W EMC6Q12431 108 aa1.79□□□□□ -2.12
PEX4YGR133W YDL012CQ12489 107 aa1.79□□□□□ -2.12
PEX4YGR133W YBR200W-AQ3E755 54 aa1.79□□□□□ -2.12
PEX4YGR133W YPL038W-AQ3E7B4 63 aa1.79□□□□□ -2.12
PEX4YGR133W QCR8P08525 94 aa1.78□□□□□ -2.12
PEX4YGR133W SPS100P13130 326 aa1.78□□□□□ -2.12
PEX4YGR133W BET1P22804 142 aa1.78□□□□□ -2.12
PEX4YGR133W YHL037CP38733 133 aa1.78□□□□□ -2.12
PEX4YGR133W SHU1P38751 150 aa1.78□□□□□ -2.12
PEX4YGR133W YHR022CP38763 256 aa1.78□□□□□ -2.12
PEX4YGR133W MPC2P38857 129 aa1.78□□□□□ -2.12
PEX4YGR133W SHH4Q06236 168 aa1.78□□□□□ -2.12
PEX4YGR133W TMC1Q08422 150 aaPredicted RBP1.78□□□□□ -2.12
PEX4YGR133W YCL048W-AQ2V2Q2 79 aa1.78□□□□□ -2.12
PEX4YGR133W YDR381C-AQ3E6R5 114 aa1.78□□□□□ -2.12
PEX4YGR133W YOL085CQ99345 113 aa1.78□□□□□ -2.12
PEX4YGR133W Q0297Q9ZZV8 51 aa1.78□□□□□ -2.12
PEX4YGR133W URA2P07259 2214 aaKnown RBP1.78□□□□□ -2.13
PEX4YGR133W CDC39P25655 2108 aaKnown RBP1.78□□□□□ -2.13
PEX4YGR133W BLM10P43583 2143 aa1.78□□□□□ -2.13
PEX4YGR133W DYN1P36022 4092 aa1.77□□□□□ -2.13
PEX4YGR133W UBC4P15731 148 aa1.77□□□□□ -2.13
PEX4YGR133W RPL16BP26785 198 aaKnown RBP1.77□□□□□ -2.13
PEX4YGR133W RPB9P27999 122 aa1.77□□□□□ -2.13
PEX4YGR133W YRA2P36036 203 aaKnown RBP RIP-Chip data1.77□□□□□ -2.13not detected
PEX4YGR133W YBR209WP38311 105 aa1.77□□□□□ -2.13
PEX4YGR133W YSY6P38374 65 aa1.77□□□□□ -2.13
PEX4YGR133W RRT13P40042 185 aa1.77□□□□□ -2.13
PEX4YGR133W WWM1P43582 211 aaKnown RBP1.77□□□□□ -2.13
PEX4YGR133W YGR025WP53216 100 aa1.77□□□□□ -2.13
PEX4YGR133W RSM19P53733 91 aaPredicted RBP1.77□□□□□ -2.13
PEX4YGR133W HAL1Q01766 294 aa1.77□□□□□ -2.13
PEX4YGR133W CCW12Q12127 133 aa1.77□□□□□ -2.13
PEX4YGR133W FAS1P07149 2051 aaKnown RBP1.76□□□□□ -2.13
PEX4YGR133W MSA2P36157 363 aa1.76□□□□□ -2.13
PEX4YGR133W YEL008WP40001 126 aa1.76□□□□□ -2.13
PEX4YGR133W YGL088WP53151 121 aa1.76□□□□□ -2.13
PEX4YGR133W YMR175W-AQ3E766 64 aa1.76□□□□□ -2.13
PEX4YGR133W CYR1P08678 2026 aaKnown RBP1.75□□□□□ -2.13
PEX4YGR133W YER135CP40082 130 aa1.75□□□□□ -2.13
PEX4YGR133W YER187WP40102 141 aa1.75□□□□□ -2.13
PEX4YGR133W ARC15P40518 154 aaRIP-Chip data1.75□□□□□ -2.13not detected
PEX4YGR133W GAT4P40569 121 aa1.75□□□□□ -2.13
PEX4YGR133W RGM1Q00453 211 aa1.75□□□□□ -2.13
PEX4YGR133W YNL146C-AQ3E7Z1 64 aa1.75□□□□□ -2.13
PEX4YGR133W YOR011W-AQ3E807 68 aa1.75□□□□□ -2.13
PEX4YGR133W YOR020W-AQ3E824 90 aa1.75□□□□□ -2.13
PEX4YGR133W YLR236CA0A023PZG4 107 aa1.74□□□□□ -2.13
PEX4YGR133W YJR107C-AP0CT86 78 aa1.74□□□□□ -2.13
PEX4YGR133W SPT4P32914 102 aaPredicted RBP1.74□□□□□ -2.13
PEX4YGR133W YBL081WP38180 368 aaKnown RBP1.74□□□□□ -2.13
PEX4YGR133W RPR2P40571 144 aa1.74□□□□□ -2.13
PEX4YGR133W TOS8P53147 276 aa1.74□□□□□ -2.13
PEX4YGR133W PMP3P87284 55 aa1.74□□□□□ -2.13
PEX4YGR133W IRC21Q04772 201 aa1.74□□□□□ -2.13
PEX4YGR133W YPR013CQ12145 317 aa1.74□□□□□ -2.13
PEX4YGR133W YOR034C-AQ3E735 80 aa1.74□□□□□ -2.13
PEX4YGR133W YLR285C-AQ3E771 56 aa1.74□□□□□ -2.13
PEX4YGR133W MIC10Q96VH5 97 aa1.74□□□□□ -2.13
PEX4YGR133W YLR156WP0CE96 114 aa1.73□□□□□ -2.13
PEX4YGR133W YLR159WP0CE97 114 aa1.73□□□□□ -2.13
PEX4YGR133W YLR161WP0CE98 114 aa1.73□□□□□ -2.13
PEX4YGR133W COX14P39103 70 aa1.73□□□□□ -2.13
PEX4YGR133W MIG3P39943 394 aa1.73□□□□□ -2.13
PEX4YGR133W YFL019CP43576 117 aa1.73□□□□□ -2.13
PEX4YGR133W SMD1Q02260 146 aaPredicted RBP1.73□□□□□ -2.13
PEX4YGR133W YMR295CQ03559 197 aa1.73□□□□□ -2.13
PEX4YGR133W MRPS8Q03799 155 aa1.73□□□□□ -2.13
PEX4YGR133W YMR244WQ04018 355 aa1.73□□□□□ -2.13
PEX4YGR133W YLL006W-AQ3E814 58 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms