RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W TY1B-PLQ12414 1755 aaKnown RBP0.4□□□□□ -2.35
SMD1YGR074W TY1B-ORQ92393 1755 aa0.4□□□□□ -2.35
SMD1YGR074W ATX1P38636 73 aa0.4□□□□□ -2.35
SMD1YGR074W SNU13P39990 126 aaKnown RBP0.4□□□□□ -2.35
SMD1YGR074W DNF3Q12674 1656 aa0.4□□□□□ -2.35
SMD1YGR074W RPA12P32529 125 aaKnown RBP0.39□□□□□ -2.35
SMD1YGR074W MSL1P40567 111 aaPredicted RBP0.39□□□□□ -2.35
SMD1YGR074W PAU4P53427 120 aa0.39□□□□□ -2.35
SMD1YGR074W YPL225WQ08971 146 aaKnown RBP0.39□□□□□ -2.35
SMD1YGR074W YNL198CP40166 100 aa0.38□□□□□ -2.35
SMD1YGR074W NHP10Q03435 203 aa0.38□□□□□ -2.35
SMD1YGR074W YDR029WQ12111 104 aa0.38□□□□□ -2.35
SMD1YGR074W SUS1Q6WNK7 96 aa0.38□□□□□ -2.35
SMD1YGR074W ECM29P38737 1868 aa0.37□□□□□ -2.35
SMD1YGR074W TY1B-LR3P0C2I6 1755 aaKnown RBP0.37□□□□□ -2.35
SMD1YGR074W SPC1P46965 94 aa0.37□□□□□ -2.35
SMD1YGR074W RPL38P49167 78 aaKnown RBP0.36□□□□□ -2.35
SMD1YGR074W TAO3P40468 2376 aa0.35□□□□□ -2.35
SMD1YGR074W COX7P10174 60 aa0.35□□□□□ -2.35
SMD1YGR074W YNL042W-BQ3E7Z2 85 aa0.35□□□□□ -2.35
SMD1YGR074W RRT15Q3E811 62 aa0.35□□□□□ -2.35
SMD1YGR074W PDR10P51533 1564 aa0.35□□□□□ -2.35
SMD1YGR074W RPC10P40422 70 aa0.34□□□□□ -2.36
SMD1YGR074W BSC4P53841 131 aa0.34□□□□□ -2.36
SMD1YGR074W YDR042CQ03205 200 aa0.34□□□□□ -2.36
SMD1YGR074W STT4P37297 1900 aa0.33□□□□□ -2.36
SMD1YGR074W SWR1Q05471 1514 aa0.33□□□□□ -2.36
SMD1YGR074W GDB1Q06625 1536 aa0.33□□□□□ -2.36
SMD1YGR074W TY1B-DR5P0C2I2 1755 aa0.32□□□□□ -2.36
SMD1YGR074W TY1B-PR1P0C2I9 1755 aaKnown RBP0.32□□□□□ -2.36
SMD1YGR074W TY1B-JR1P47098 1755 aa0.32□□□□□ -2.36
SMD1YGR074W TY1B-ML2Q03434 1755 aaKnown RBP0.32□□□□□ -2.36
SMD1YGR074W TY1B-ER1Q03612 1755 aa0.32□□□□□ -2.36
SMD1YGR074W TY1B-ER2Q03619 1755 aa0.32□□□□□ -2.36
SMD1YGR074W TY1B-DR1Q03855 1755 aa0.32□□□□□ -2.36
SMD1YGR074W TY1B-ML1Q04711 1755 aaKnown RBP0.32□□□□□ -2.36
SMD1YGR074W TY1B-LR1Q12088 1755 aaKnown RBP0.32□□□□□ -2.36
SMD1YGR074W TY1B-GR2Q12269 1755 aa0.32□□□□□ -2.36
SMD1YGR074W TY1B-OLQ12273 1755 aa0.32□□□□□ -2.36
SMD1YGR074W TY1B-DR3Q99231 1755 aa0.32□□□□□ -2.36
SMD1YGR074W HKR1P41809 1802 aa0.32□□□□□ -2.36
SMD1YGR074W YBR016WP38216 128 aa0.32□□□□□ -2.36
SMD1YGR074W YKL068W-AQ3E826 78 aa0.32□□□□□ -2.36
SMD1YGR074W Q0032Q9ZZX7 96 aa0.32□□□□□ -2.36
SMD1YGR074W TOM6P33448 61 aa0.31□□□□□ -2.36
SMD1YGR074W MHF2Q3E829 80 aa0.31□□□□□ -2.36
SMD1YGR074W YFR009W-AP0C5M9 85 aa0.3□□□□□ -2.36
SMD1YGR074W YJR107C-AP0CT86 78 aa0.3□□□□□ -2.36
SMD1YGR074W NHP2P32495 156 aaPredicted RBP0.3□□□□□ -2.36
SMD1YGR074W YCL001W-BQ96VH2 84 aa0.3□□□□□ -2.36
SMD1YGR074W POL1P13382 1468 aa0.29□□□□□ -2.36
SMD1YGR074W YBR056W-AI2HB52 66 aa0.29□□□□□ -2.36
SMD1YGR074W YMR082CQ04276 118 aa0.29□□□□□ -2.36
SMD1YGR074W YCR075W-AQ3E830 75 aa0.29□□□□□ -2.36
SMD1YGR074W UTP10P42945 1769 aaKnown RBP0.28□□□□□ -2.36
SMD1YGR074W YAL065CO13511 128 aa0.28□□□□□ -2.36
SMD1YGR074W SCP1Q08873 200 aa0.28□□□□□ -2.36
SMD1YGR074W YBR201C-AQ2V2Q3 67 aa0.28□□□□□ -2.36
SMD1YGR074W ECM12O13529 151 aa0.27□□□□□ -2.37
SMD1YGR074W YHR214C-DP0CX93 97 aa0.27□□□□□ -2.37
SMD1YGR074W BPH1P25356 2167 aa0.26□□□□□ -2.37
SMD1YGR074W ATP18P81450 59 aa0.26□□□□□ -2.37
SMD1YGR074W YMR122W-AQ3E842 84 aa0.26□□□□□ -2.37
SMD1YGR074W ESC1Q03661 1658 aaKnown RBP0.26□□□□□ -2.37
SMD1YGR074W PMD1P32634 1753 aa0.25□□□□□ -2.37
SMD1YGR074W MLP1Q02455 1875 aaKnown RBP0.24□□□□□ -2.37
SMD1YGR074W YMR175W-AQ3E766 64 aa0.24□□□□□ -2.37
SMD1YGR074W SDH6Q3E785 79 aa0.24□□□□□ -2.37
SMD1YGR074W YOL097W-AQ3E7Y9 61 aa0.24□□□□□ -2.37
SMD1YGR074W FPR2P32472 135 aa0.23□□□□□ -2.37
SMD1YGR074W YGR025WP53216 100 aa0.23□□□□□ -2.37
SMD1YGR074W SGF11Q03067 99 aa0.23□□□□□ -2.37
SMD1YGR074W YOR343CQ12484 108 aa0.23□□□□□ -2.37
SMD1YGR074W YIL134C-AQ45U18 67 aa0.23□□□□□ -2.37
SMD1YGR074W XRN1P22147 1528 aaKnown RBP0.23□□□□□ -2.37
SMD1YGR074W LTE1P07866 1435 aa0.22□□□□□ -2.37
SMD1YGR074W EDC1P53080 175 aaPredicted RBP0.22□□□□□ -2.37
SMD1YGR074W YCR085WP25650 117 aa0.21□□□□□ -2.38
SMD1YGR074W YBR032WP38223 100 aa0.2□□□□□ -2.38
SMD1YGR074W PAU23Q07987 124 aa0.2□□□□□ -2.38
SMD1YGR074W PAU17Q12370 124 aa0.2□□□□□ -2.38
SMD1YGR074W ESP1Q03018 1630 aa0.2□□□□□ -2.38
SMD1YGR074W APC1P53886 1748 aa0.19□□□□□ -2.38
SMD1YGR074W YKL065W-AQ2V2P2 73 aa0.19□□□□□ -2.38
SMD1YGR074W YDR381C-AQ3E6R5 114 aa0.18□□□□□ -2.38
SMD1YGR074W NOP10Q6Q547 58 aaPredicted RBP0.18□□□□□ -2.38
SMD1YGR074W YPR108W-AQ3E7B3 70 aa0.17□□□□□ -2.38
SMD1YGR074W YSP2Q06681 1438 aa0.16□□□□□ -2.38
SMD1YGR074W YGL194C-AQ2V2P6 80 aa0.16□□□□□ -2.38
SMD1YGR074W YOR105WQ08504 108 aa0.15□□□□□ -2.39
SMD1YGR074W SEN1Q00416 2231 aaKnown RBP0.14□□□□□ -2.39
SMD1YGR074W YOR314WQ12506 109 aa0.14□□□□□ -2.39
SMD1YGR074W POC4Q12245 148 aaPredicted RBP0.13□□□□□ -2.39
SMD1YGR074W YIL156W-BQ2V2P4 73 aa0.13□□□□□ -2.39
SMD1YGR074W MMS22Q06164 1454 aa0.13□□□□□ -2.39
SMD1YGR074W SKI3P17883 1432 aaKnown RBP0.13□□□□□ -2.39
SMD1YGR074W MMS1Q06211 1407 aa0.12□□□□□ -2.39
SMD1YGR074W TY2B-CP25384 1770 aa0.11□□□□□ -2.39
SMD1YGR074W TY2B-DR1Q12472 1770 aa0.11□□□□□ -2.39
SMD1YGR074W YCR108CQ3E819 63 aa0.11□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms