RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C EDC1P53080 175 aaPredicted RBP3.42□□□□□ -1.86
PRP28YDR243C RPL26BP53221 127 aaKnown RBP3.42□□□□□ -1.86
PRP28YDR243C DAD4P69851 72 aa3.42□□□□□ -1.86
PRP28YDR243C SPG4Q04438 115 aa3.42□□□□□ -1.86
PRP28YDR243C SRL1Q08673 210 aa3.42□□□□□ -1.86
PRP28YDR243C YKL065W-AQ2V2P2 73 aa3.42□□□□□ -1.86
PRP28YDR243C YGL258W-AQ3E740 77 aa3.42□□□□□ -1.86
PRP28YDR243C YPS5P53057 165 aa3.41□□□□□ -1.86
PRP28YDR243C YNL190WP53872 204 aa3.41□□□□□ -1.86
PRP28YDR243C SED1Q01589 338 aa3.41□□□□□ -1.86
PRP28YDR243C YER188C-AP0C0V2 99 aa3.4□□□□□ -1.86
PRP28YDR243C DDR48P18899 430 aaKnown RBP3.4□□□□□ -1.86
PRP28YDR243C YMR141CP40211 102 aa3.4□□□□□ -1.86
PRP28YDR243C MPC3P53311 146 aa3.4□□□□□ -1.86
PRP28YDR243C YMR122CQ03879 124 aa3.4□□□□□ -1.86
PRP28YDR243C YMR321CQ04898 105 aa3.4□□□□□ -1.86
PRP28YDR243C YAL064W-BO13512 126 aa3.4□□□□□ -1.87
PRP28YDR243C MRPS12P53732 153 aa3.4□□□□□ -1.87
PRP28YDR243C YDR182W-AQ3E796 67 aa3.4□□□□□ -1.87
PRP28YDR243C YGR035W-AQ45U48 73 aa3.4□□□□□ -1.87
PRP28YDR243C OST5Q92316 86 aa3.4□□□□□ -1.87
PRP28YDR243C CCW14O13547 238 aa3.39□□□□□ -1.87
PRP28YDR243C YER135CP40082 130 aa3.39□□□□□ -1.87
PRP28YDR243C IRC21Q04772 201 aa3.39□□□□□ -1.87
PRP28YDR243C IRC19Q07843 230 aa3.39□□□□□ -1.87
PRP28YDR243C NOP10Q6Q547 58 aaPredicted RBP3.39□□□□□ -1.87
PRP28YDR243C YGR018CP53211 109 aa3.38□□□□□ -1.87
PRP28YDR243C RPL36BO14455 100 aaKnown RBP3.38□□□□□ -1.87
PRP28YDR243C RPL36AP05745 100 aaPredicted RBP3.38□□□□□ -1.87
PRP28YDR243C SHU1P38751 150 aa3.38□□□□□ -1.87
PRP28YDR243C ATP15P21306 62 aa3.37□□□□□ -1.87
PRP28YDR243C FYV5P25585 152 aa3.37□□□□□ -1.87
PRP28YDR243C MRPL39P36533 70 aa3.37□□□□□ -1.87
PRP28YDR243C YFL015CP43578 164 aa3.37□□□□□ -1.87
PRP28YDR243C FHN1P53279 174 aa3.37□□□□□ -1.87
PRP28YDR243C YBL071CP38185 102 aa3.36□□□□□ -1.87
PRP28YDR243C NCE101Q02820 53 aa3.36□□□□□ -1.87
PRP28YDR243C YOR008C-AQ3E7B9 74 aa3.36□□□□□ -1.87
PRP28YDR243C YOL166W-AQ8TGJ1 51 aa3.36□□□□□ -1.87
PRP28YDR243C YHL037CP38733 133 aa3.35□□□□□ -1.87
PRP28YDR243C YMR254CQ04838 102 aa3.35□□□□□ -1.87
PRP28YDR243C YPR153WQ06537 140 aa3.35□□□□□ -1.87
PRP28YDR243C YCR022CP25620 114 aa3.35□□□□□ -1.87
PRP28YDR243C YOR020W-AQ3E824 90 aa3.35□□□□□ -1.87
PRP28YDR243C RPS23AP0CX29 145 aaKnown RBP3.34□□□□□ -1.87
PRP28YDR243C RPS23BP0CX30 145 aa3.34□□□□□ -1.87
PRP28YDR243C UTH1P36135 365 aa3.34□□□□□ -1.87
PRP28YDR243C KRE9P39005 276 aa3.34□□□□□ -1.87
PRP28YDR243C ARC15P40518 154 aaRIP-Chip data3.34□□□□□ -1.87not detected
PRP28YDR243C RGM1Q00453 211 aa3.34□□□□□ -1.87
PRP28YDR243C YLR342W-AQ3E810 57 aa3.34□□□□□ -1.87
PRP28YDR243C YFR032C-BQ8TGU2 87 aa3.34□□□□□ -1.87
PRP28YDR243C YCR043CP25361 127 aa3.33□□□□□ -1.88
PRP28YDR243C BPH1P25356 2167 aa3.33□□□□□ -1.88
PRP28YDR243C YJR107C-AP0CT86 78 aa3.33□□□□□ -1.88
PRP28YDR243C RPS30AP0CX33 63 aaKnown RBP3.33□□□□□ -1.88
PRP28YDR243C RPS30BP0CX34 63 aaKnown RBP3.33□□□□□ -1.88
PRP28YDR243C HSP150P32478 413 aa3.33□□□□□ -1.88
PRP28YDR243C WWM1P43582 211 aaKnown RBP3.33□□□□□ -1.88
PRP28YDR243C BLM10P43583 2143 aa3.32□□□□□ -1.88
PRP28YDR243C YIR020CP40575 100 aa3.32□□□□□ -1.88
PRP28YDR243C TRS23Q03784 219 aa3.32□□□□□ -1.88
PRP28YDR243C YOL014WQ08110 124 aa3.32□□□□□ -1.88
PRP28YDR243C YLR111WQ12528 110 aa3.32□□□□□ -1.88
PRP28YDR243C QCR10P37299 77 aa3.31□□□□□ -1.88
PRP28YDR243C RPR2P40571 144 aa3.31□□□□□ -1.88
PRP28YDR243C LEE1Q02799 301 aaKnown RBP3.31□□□□□ -1.88
PRP28YDR243C YOR034C-AQ3E735 80 aa3.31□□□□□ -1.88
PRP28YDR243C YLR236CA0A023PZG4 107 aa3.3□□□□□ -1.88
PRP28YDR243C YKL097CP34245 136 aa3.3□□□□□ -1.88
PRP28YDR243C HOT13P36078 116 aa3.3□□□□□ -1.88
PRP28YDR243C REE1P40893 198 aa3.3□□□□□ -1.88
PRP28YDR243C QCR8P08525 94 aa3.3□□□□□ -1.88
PRP28YDR243C YMR244WQ04018 355 aa3.29□□□□□ -1.88
PRP28YDR243C RRT1P38192 103 aa3.28□□□□□ -1.88
PRP28YDR243C FYV12Q08559 129 aa3.28□□□□□ -1.88
PRP28YDR243C YJR146WP47174 117 aa3.28□□□□□ -1.89
PRP28YDR243C LIP1Q03579 150 aa3.28□□□□□ -1.89
PRP28YDR243C FAS1P07149 2051 aaKnown RBP3.27□□□□□ -1.89
PRP28YDR243C YER145C-AA0A023PYF4 145 aa3.27□□□□□ -1.89
PRP28YDR243C RPL38P49167 78 aaKnown RBP3.27□□□□□ -1.89
PRP28YDR243C ATP18P81450 59 aa3.27□□□□□ -1.89
PRP28YDR243C SOM1Q05676 74 aa3.27□□□□□ -1.89
PRP28YDR243C MRPL38P35996 138 aaPredicted RBP3.26□□□□□ -1.89
PRP28YDR243C SPC1P46965 94 aa3.26□□□□□ -1.89
PRP28YDR243C YIL156W-BQ2V2P4 73 aa3.26□□□□□ -1.89
PRP28YDR243C YOR032W-AQ8TGS1 66 aa3.26□□□□□ -1.89
PRP28YDR243C YFR009W-AP0C5M9 85 aa3.25□□□□□ -1.89
PRP28YDR243C YJL027CP47063 138 aaPredicted RBP3.25□□□□□ -1.89
PRP28YDR243C TMC1Q08422 150 aaPredicted RBP3.25□□□□□ -1.89
PRP28YDR243C TVP23P38962 199 aa3.24□□□□□ -1.89
PRP28YDR243C EDC2P40023 145 aaPredicted RBP3.24□□□□□ -1.89
PRP28YDR243C YCR095W-AQ3E787 52 aa3.24□□□□□ -1.89
PRP28YDR243C BRR2P32639 2163 aaKnown RBP3.23□□□□□ -1.89
PRP28YDR243C RPS11AP0CX47 156 aaKnown RBP3.23□□□□□ -1.89
PRP28YDR243C RPS11BP0CX48 156 aaKnown RBP3.23□□□□□ -1.89
PRP28YDR243C YSF3P0C074 85 aaPredicted RBP3.23□□□□□ -1.89
PRP28YDR243C YBL008W-AQ3E821 79 aa3.23□□□□□ -1.89
PRP28YDR243C HUB1Q6Q546 73 aa3.23□□□□□ -1.89
PRP28YDR243C SEN1Q00416 2231 aaKnown RBP3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 79.4 ms