RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W YNL190WP53872 204 aa5.9□□□□□ -1.46
NDE2YDL085W UBC5P15732 148 aa5.89□□□□□ -1.47
NDE2YDL085W YEL008WP40001 126 aa5.89□□□□□ -1.47
NDE2YDL085W YGR039WP53225 103 aa5.89□□□□□ -1.47
NDE2YDL085W YCL021W-AQ96VH3 125 aa5.89□□□□□ -1.47
NDE2YDL085W YCR085WP25650 117 aa5.88□□□□□ -1.47
NDE2YDL085W YIA6P40556 373 aa5.88□□□□□ -1.47
NDE2YDL085W YGL088WP53151 121 aa5.88□□□□□ -1.47
NDE2YDL085W ABF2Q02486 183 aa5.88□□□□□ -1.47
NDE2YDL085W TOR1P35169 2470 aa5.88□□□□□ -1.47
NDE2YDL085W YCL042WP25572 119 aa5.88□□□□□ -1.47
NDE2YDL085W NRG2P38082 220 aa5.88□□□□□ -1.47
NDE2YDL085W YAR029WP39549 74 aa5.88□□□□□ -1.47
NDE2YDL085W YFR035CP43608 114 aa5.88□□□□□ -1.47
NDE2YDL085W YGR035W-AQ45U48 73 aa5.88□□□□□ -1.47
NDE2YDL085W KRE1P17260 313 aa5.87□□□□□ -1.47
NDE2YDL085W DSE2P38844 325 aa5.87□□□□□ -1.47
NDE2YDL085W CWP2P43497 92 aa5.87□□□□□ -1.47
NDE2YDL085W YPS5P53057 165 aa5.87□□□□□ -1.47
NDE2YDL085W CUP1-1P0CX80 61 aa5.86□□□□□ -1.47
NDE2YDL085W CUP1-2P0CX81 61 aa5.86□□□□□ -1.47
NDE2YDL085W YDR274CP87283 123 aa5.86□□□□□ -1.47
NDE2YDL085W YGR240C-AQ3E786 66 aa5.85□□□□□ -1.47
NDE2YDL085W SBH1P52870 82 aa5.85□□□□□ -1.47
NDE2YDL085W PPT2Q12036 173 aa5.85□□□□□ -1.47
NDE2YDL085W UBC11P52492 156 aa5.84□□□□□ -1.47
NDE2YDL085W ERI1P62651 68 aaKnown RBP5.84□□□□□ -1.47
NDE2YDL085W ARC15P40518 154 aaRIP-Chip data5.83□□□□□ -1.48not detected
NDE2YDL085W YAL063C-AQ3E791 96 aa5.83□□□□□ -1.48
NDE2YDL085W KRE9P39005 276 aa5.82□□□□□ -1.48
NDE2YDL085W AIM19P40502 157 aa5.82□□□□□ -1.48
NDE2YDL085W HUR1P45820 110 aa5.82□□□□□ -1.48
NDE2YDL085W SKI6P46948 246 aaPredicted RBP5.82□□□□□ -1.48
NDE2YDL085W COX12Q01519 83 aa5.82□□□□□ -1.48
NDE2YDL085W YDR029WQ12111 104 aa5.82□□□□□ -1.48
NDE2YDL085W YFL041W-AQ3E817 63 aa5.82□□□□□ -1.48
NDE2YDL085W ECM12O13529 151 aa5.81□□□□□ -1.48
NDE2YDL085W ENV10Q99382 181 aa5.81□□□□□ -1.48
NDE2YDL085W MLF3P32047 452 aa5.81□□□□□ -1.48
NDE2YDL085W YMR122W-AQ3E842 84 aa5.81□□□□□ -1.48
NDE2YDL085W RGM1Q00453 211 aa5.8□□□□□ -1.48
NDE2YDL085W YMR295CQ03559 197 aa5.8□□□□□ -1.48
NDE2YDL085W YDR119W-AQ2V2P9 66 aa5.79□□□□□ -1.48
NDE2YDL085W YKL183C-AQ3E765 70 aa5.79□□□□□ -1.48
NDE2YDL085W YOR020W-AQ3E824 90 aa5.79□□□□□ -1.48
NDE2YDL085W KTI11Q3E840 82 aa5.79□□□□□ -1.48
NDE2YDL085W COX14P39103 70 aa5.78□□□□□ -1.48
NDE2YDL085W RPR2P40571 144 aa5.78□□□□□ -1.48
NDE2YDL085W YMR320WQ04897 101 aa5.78□□□□□ -1.48
NDE2YDL085W VAM10Q08474 114 aa5.78□□□□□ -1.48
NDE2YDL085W PBI2P0CT04 75 aaKnown RBP5.77□□□□□ -1.48
NDE2YDL085W KNH1P50112 268 aa5.77□□□□□ -1.48
NDE2YDL085W SVP26P38869 228 aa5.77□□□□□ -1.49
NDE2YDL085W PBA1Q05778 276 aa5.77□□□□□ -1.49
NDE2YDL085W YCR001WP25347 104 aa5.76□□□□□ -1.49
NDE2YDL085W SGF11Q03067 99 aa5.76□□□□□ -1.49
NDE2YDL085W CRC1Q12289 327 aa5.76□□□□□ -1.49
NDE2YDL085W YDR381C-AQ3E6R5 114 aa5.76□□□□□ -1.49
NDE2YDL085W MSA2P36157 363 aa5.75□□□□□ -1.49
NDE2YDL085W YBR219CP38317 127 aa5.75□□□□□ -1.49
NDE2YDL085W YPR010C-AA5Z2X5 72 aa5.74□□□□□ -1.49
NDE2YDL085W YHR139C-AO13536 103 aa5.74□□□□□ -1.49
NDE2YDL085W YLL006W-AQ3E814 58 aa5.74□□□□□ -1.49
NDE2YDL085W YLR412C-AQ3E742 68 aa5.73□□□□□ -1.49
NDE2YDL085W YMR175W-AQ3E766 64 aa5.73□□□□□ -1.49
NDE2YDL085W YLR281CQ05863 155 aa5.72□□□□□ -1.49
NDE2YDL085W COF1Q03048 143 aaKnown RBP5.71□□□□□ -1.5
NDE2YDL085W RDS3Q06835 107 aaPredicted RBP5.71□□□□□ -1.5
NDE2YDL085W YDL241WQ07738 123 aa5.71□□□□□ -1.5
NDE2YDL085W YLR236CA0A023PZG4 107 aa5.7□□□□□ -1.5
NDE2YDL085W EMC6Q12431 108 aa5.7□□□□□ -1.5
NDE2YDL085W YOR034C-AQ3E735 80 aa5.7□□□□□ -1.5
NDE2YDL085W YCR050CP25630 102 aa5.69□□□□□ -1.5
NDE2YDL085W TOM6P33448 61 aa5.69□□□□□ -1.5
NDE2YDL085W SPC1P46965 94 aa5.69□□□□□ -1.5
NDE2YDL085W SMP1P38128 452 aa5.68□□□□□ -1.5
NDE2YDL085W YHL042WP38729 150 aa5.68□□□□□ -1.5
NDE2YDL085W HAL1Q01766 294 aa5.68□□□□□ -1.5
NDE2YDL085W YJR107C-AP0CT86 78 aa5.67□□□□□ -1.5
NDE2YDL085W IRC21Q04772 201 aa5.67□□□□□ -1.5
NDE2YDL085W YAL065CO13511 128 aa5.66□□□□□ -1.5
NDE2YDL085W RPC10P40422 70 aa5.66□□□□□ -1.5
NDE2YDL085W SFT1P43682 97 aa5.66□□□□□ -1.5
NDE2YDL085W SHH4Q06236 168 aa5.66□□□□□ -1.5
NDE2YDL085W YNL277W-AQ3E7Z0 62 aa5.66□□□□□ -1.5
NDE2YDL085W RPL33AP05744 107 aaKnown RBP5.65□□□□□ -1.51
NDE2YDL085W YHL018WP38744 120 aaPredicted RBP5.65□□□□□ -1.51
NDE2YDL085W RPL33BP41056 107 aaKnown RBP5.65□□□□□ -1.51
NDE2YDL085W MMS2P53152 137 aa5.65□□□□□ -1.51
NDE2YDL085W YGR164WP53291 111 aa5.65□□□□□ -1.51
NDE2YDL085W YPL038W-AQ3E7B4 63 aa5.65□□□□□ -1.51
NDE2YDL085W KSH1Q8TGJ3 72 aa5.65□□□□□ -1.51
NDE2YDL085W RPL29P05747 59 aaPredicted RBP5.64□□□□□ -1.51
NDE2YDL085W ICY1Q04329 127 aa5.64□□□□□ -1.51
NDE2YDL085W MPC3P53311 146 aa5.63□□□□□ -1.51
NDE2YDL085W SMD1Q02260 146 aaPredicted RBP5.62□□□□□ -1.51
NDE2YDL085W MVB12P42939 101 aa5.61□□□□□ -1.51
NDE2YDL085W ATP18P81450 59 aa5.61□□□□□ -1.51
NDE2YDL085W YLR122CQ12312 125 aa5.61□□□□□ -1.51
NDE2YDL085W YSY6P38374 65 aa5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms