RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C YER039C-AP0CD97 72 aa1.88□□□□□ -2.11
RPN4YDL020C SFT2P38166 215 aa1.88□□□□□ -2.11
RPN4YDL020C YBL071CP38185 102 aa1.88□□□□□ -2.11
RPN4YDL020C SNF11P38956 169 aa1.88□□□□□ -2.11
RPN4YDL020C YIL014C-AQ02598 104 aa1.88□□□□□ -2.11
RPN4YDL020C COF1Q03048 143 aaKnown RBP1.88□□□□□ -2.11
RPN4YDL020C YLR042CQ07990 161 aa1.88□□□□□ -2.11
RPN4YDL020C PRM3Q08931 133 aa1.88□□□□□ -2.11
RPN4YDL020C BLM10P43583 2143 aa1.87□□□□□ -2.11
RPN4YDL020C SEC16P48415 2195 aaKnown RBP1.87□□□□□ -2.11
RPN4YDL020C YHR130CP38834 111 aa1.87□□□□□ -2.11
RPN4YDL020C HUA1P40325 198 aa1.87□□□□□ -2.11
RPN4YDL020C MGR2Q02889 113 aa1.87□□□□□ -2.11
RPN4YDL020C BRR2P32639 2163 aaKnown RBP1.87□□□□□ -2.11
RPN4YDL020C ACC1Q00955 2233 aaKnown RBP1.86□□□□□ -2.11
RPN4YDL020C YMR141CP40211 102 aa1.86□□□□□ -2.11
RPN4YDL020C YMR103CQ04436 120 aa1.86□□□□□ -2.11
RPN4YDL020C YOS1Q3E834 85 aa1.86□□□□□ -2.11
RPN4YDL020C TAO3P40468 2376 aa1.86□□□□□ -2.11
RPN4YDL020C NHP2P32495 156 aaPredicted RBP1.85□□□□□ -2.11
RPN4YDL020C RRT1P38192 103 aa1.85□□□□□ -2.11
RPN4YDL020C ATX1P38636 73 aa1.85□□□□□ -2.11
RPN4YDL020C YER181CP40097 107 aa1.85□□□□□ -2.11
RPN4YDL020C LST8P41318 303 aa1.85□□□□□ -2.11
RPN4YDL020C IMP2P46972 177 aa1.85□□□□□ -2.11
RPN4YDL020C SIP18P50263 79 aa1.85□□□□□ -2.11
RPN4YDL020C GPI19Q04082 140 aa1.85□□□□□ -2.11
RPN4YDL020C DAD1Q12248 94 aa1.85□□□□□ -2.11
RPN4YDL020C PBI2P0CT04 75 aaKnown RBP1.85□□□□□ -2.11
RPN4YDL020C INO4P13902 151 aa1.85□□□□□ -2.11
RPN4YDL020C YEL067CP39978 195 aa1.85□□□□□ -2.11
RPN4YDL020C YFL065CP43539 102 aa1.85□□□□□ -2.11
RPN4YDL020C TOS6P48560 102 aa1.85□□□□□ -2.11
RPN4YDL020C YPR203WQ08994 102 aa1.85□□□□□ -2.11
RPN4YDL020C YLR342W-AQ3E810 57 aa1.85□□□□□ -2.11
RPN4YDL020C PFY1P07274 126 aa1.84□□□□□ -2.12
RPN4YDL020C YHR213WP0CI67 198 aa1.84□□□□□ -2.12
RPN4YDL020C YRA2P36036 203 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
RPN4YDL020C YHL042WP38729 150 aa1.84□□□□□ -2.12
RPN4YDL020C SFT1P43682 97 aa1.84□□□□□ -2.12
RPN4YDL020C YGR039WP53225 103 aa1.84□□□□□ -2.12
RPN4YDL020C YOR097CQ12274 175 aaPredicted RBP1.84□□□□□ -2.12
RPN4YDL020C COA3Q3E7B2 85 aa1.84□□□□□ -2.12
RPN4YDL020C YDL022C-AP0C5L6 82 aa1.83□□□□□ -2.12
RPN4YDL020C HMRA2P0CY13 119 aa1.83□□□□□ -2.12
RPN4YDL020C YHR140WP38842 239 aa1.83□□□□□ -2.12
RPN4YDL020C SPI1P40092 148 aa1.83□□□□□ -2.12
RPN4YDL020C AIM11P87275 137 aa1.83□□□□□ -2.12
RPN4YDL020C LSM6Q06406 86 aaKnown RBP1.83□□□□□ -2.12
RPN4YDL020C HPA2Q06592 156 aa1.83□□□□□ -2.12
RPN4YDL020C YMR105W-AQ8TGS8 64 aa1.83□□□□□ -2.12
RPN4YDL020C RPA12P32529 125 aaKnown RBP1.82□□□□□ -2.12
RPN4YDL020C YPL261CQ08976 102 aa1.82□□□□□ -2.12
RPN4YDL020C RPL39P04650 51 aa1.81□□□□□ -2.12
RPN4YDL020C YDR034W-BQ6Q5X2 51 aa1.81□□□□□ -2.12
RPN4YDL020C CCW14O13547 238 aa1.81□□□□□ -2.12
RPN4YDL020C YCR085WP25650 117 aa1.81□□□□□ -2.12
RPN4YDL020C YAR029WP39549 74 aa1.81□□□□□ -2.12
RPN4YDL020C FIP1P45976 327 aa1.81□□□□□ -2.12
RPN4YDL020C YNL277W-AQ3E7Z0 62 aa1.81□□□□□ -2.12
RPN4YDL020C YFL041W-AQ3E817 63 aa1.81□□□□□ -2.12
RPN4YDL020C SEN1Q00416 2231 aaKnown RBP1.8□□□□□ -2.12
RPN4YDL020C UBC5P15732 148 aa1.8□□□□□ -2.12
RPN4YDL020C YEL008WP40001 126 aa1.8□□□□□ -2.12
RPN4YDL020C POR2P40478 281 aa1.8□□□□□ -2.12
RPN4YDL020C CWP2P43497 92 aa1.8□□□□□ -2.12
RPN4YDL020C YFL051CP43552 160 aa1.8□□□□□ -2.12
RPN4YDL020C COX12Q01519 83 aa1.8□□□□□ -2.12
RPN4YDL020C YLR194CQ05777 254 aa1.8□□□□□ -2.12
RPN4YDL020C FCY1Q12178 158 aa1.8□□□□□ -2.12
RPN4YDL020C YOR008C-AQ3E7B9 74 aa1.8□□□□□ -2.12
RPN4YDL020C YOR381W-AQ3E804 55 aa1.8□□□□□ -2.12
RPN4YDL020C KTI11Q3E840 82 aa1.8□□□□□ -2.12
RPN4YDL020C HFA1P32874 2273 aa1.79□□□□□ -2.12
RPN4YDL020C AQY2P0CD90 149 aa1.79□□□□□ -2.12
RPN4YDL020C MRPL38P35996 138 aaPredicted RBP1.79□□□□□ -2.12
RPN4YDL020C YHL037CP38733 133 aa1.79□□□□□ -2.12
RPN4YDL020C SED1Q01589 338 aa1.79□□□□□ -2.12
RPN4YDL020C YDR029WQ12111 104 aa1.79□□□□□ -2.12
RPN4YDL020C ENV10Q99382 181 aa1.79□□□□□ -2.12
RPN4YDL020C RAD6P06104 172 aa1.78□□□□□ -2.12
RPN4YDL020C MRPS12P53732 153 aa1.78□□□□□ -2.12
RPN4YDL020C YDR119W-AQ2V2P9 66 aa1.78□□□□□ -2.12
RPN4YDL020C YBR200W-AQ3E755 54 aa1.78□□□□□ -2.12
RPN4YDL020C YCL042WP25572 119 aa1.77□□□□□ -2.13
RPN4YDL020C DCV1P43595 202 aa1.77□□□□□ -2.13
RPN4YDL020C VPS55P47111 140 aa1.77□□□□□ -2.13
RPN4YDL020C CCW12Q12127 133 aa1.77□□□□□ -2.13
RPN4YDL020C YDR381C-AQ3E6R5 114 aa1.77□□□□□ -2.13
RPN4YDL020C YOR376W-AQ3E805 51 aa1.77□□□□□ -2.13
RPN4YDL020C AIM19P40502 157 aa1.76□□□□□ -2.13
RPN4YDL020C YGR025WP53216 100 aa1.76□□□□□ -2.13
RPN4YDL020C YNL190WP53872 204 aa1.76□□□□□ -2.13
RPN4YDL020C YCL048W-AQ2V2Q2 79 aa1.76□□□□□ -2.13
RPN4YDL020C YPL038W-AQ3E7B4 63 aa1.76□□□□□ -2.13
RPN4YDL020C ECM12O13529 151 aa1.75□□□□□ -2.13
RPN4YDL020C YHR212W-AP0CX91 67 aa1.75□□□□□ -2.13
RPN4YDL020C YCR050CP25630 102 aa1.75□□□□□ -2.13
RPN4YDL020C SHU1P38751 150 aa1.75□□□□□ -2.13
RPN4YDL020C HUR1P45820 110 aa1.75□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 69.4 ms