RNA–Protein interactions for RNA: YCR067C

SED4, Transcript of Integral ER membrane protein that stimulates Sar1p GTPase activity, yeastyeast

Gene SED4, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED4YCR067C PBA1Q05778 276 aa3.72□□□□□ -1.81
SED4YCR067C YLR412C-AQ3E742 68 aa3.72□□□□□ -1.81
SED4YCR067C YMR244WQ04018 355 aa3.72□□□□□ -1.81
SED4YCR067C EMC6Q12431 108 aa3.72□□□□□ -1.81
SED4YCR067C YBR121C-AP0C5L4 52 aa3.71□□□□□ -1.81
SED4YCR067C MRPS8Q03799 155 aa3.71□□□□□ -1.81
SED4YCR067C YFR035CP43608 114 aa3.71□□□□□ -1.82
SED4YCR067C YER121WP40076 114 aa3.71□□□□□ -1.82
SED4YCR067C RPL15AP05748 204 aaKnown RBP3.7□□□□□ -1.82
SED4YCR067C YCR050CP25630 102 aa3.7□□□□□ -1.82
SED4YCR067C YBR219CP38317 127 aa3.7□□□□□ -1.82
SED4YCR067C YMR295CQ03559 197 aa3.7□□□□□ -1.82
SED4YCR067C IRC21Q04772 201 aa3.7□□□□□ -1.82
SED4YCR067C RPL29P05747 59 aaPredicted RBP3.69□□□□□ -1.82
SED4YCR067C YAL065CO13511 128 aa3.69□□□□□ -1.82
SED4YCR067C UBC4P15731 148 aa3.69□□□□□ -1.82
SED4YCR067C ALG13P53178 202 aa3.69□□□□□ -1.82
SED4YCR067C SRL1Q08673 210 aa3.69□□□□□ -1.82
SED4YCR067C YER135CP40082 130 aa3.69□□□□□ -1.82
SED4YCR067C KTI11Q3E840 82 aa3.69□□□□□ -1.82
SED4YCR067C YER187WP40102 141 aa3.68□□□□□ -1.82
SED4YCR067C ATP18P81450 59 aa3.68□□□□□ -1.82
SED4YCR067C YJR107C-AP0CT86 78 aa3.67□□□□□ -1.82
SED4YCR067C RSM19P53733 91 aaPredicted RBP3.67□□□□□ -1.82
SED4YCR067C YLL006W-AQ3E814 58 aa3.67□□□□□ -1.82
SED4YCR067C VAM10Q08474 114 aa3.67□□□□□ -1.82
SED4YCR067C YIR020CP40575 100 aa3.67□□□□□ -1.82
SED4YCR067C ICY1Q04329 127 aa3.67□□□□□ -1.82
SED4YCR067C RDS3Q06835 107 aaPredicted RBP3.66□□□□□ -1.82
SED4YCR067C SPG4Q04438 115 aa3.66□□□□□ -1.82
SED4YCR067C HOR7Q05827 59 aa3.66□□□□□ -1.82
SED4YCR067C COX17Q12287 69 aa3.66□□□□□ -1.82
SED4YCR067C TDA8Q6B2U8 126 aa3.66□□□□□ -1.82
SED4YCR067C HAL1Q01766 294 aa3.65□□□□□ -1.82
SED4YCR067C YDL241WQ07738 123 aa3.65□□□□□ -1.82
SED4YCR067C YLR156WP0CE96 114 aa3.65□□□□□ -1.83
SED4YCR067C YLR159WP0CE97 114 aa3.65□□□□□ -1.83
SED4YCR067C YLR161WP0CE98 114 aa3.65□□□□□ -1.83
SED4YCR067C YOR034C-AQ3E735 80 aa3.65□□□□□ -1.83
SED4YCR067C TAR1Q8TGM6 124 aa3.65□□□□□ -1.83
SED4YCR067C YFR009W-AP0C5M9 85 aa3.65□□□□□ -1.83
SED4YCR067C RPS11AP0CX47 156 aaKnown RBP3.65□□□□□ -1.83
SED4YCR067C RPS11BP0CX48 156 aaKnown RBP3.65□□□□□ -1.83
SED4YCR067C YDR182W-AQ3E796 67 aa3.65□□□□□ -1.83
SED4YCR067C YOR011W-AQ3E807 68 aa3.65□□□□□ -1.83
SED4YCR067C BPH1P25356 2167 aa3.64□□□□□ -1.83
SED4YCR067C YPS5P53057 165 aa3.64□□□□□ -1.83
SED4YCR067C KSH1Q8TGJ3 72 aa3.64□□□□□ -1.83
SED4YCR067C PMP3P87284 55 aa3.64□□□□□ -1.83
SED4YCR067C SPS100P13130 326 aa3.63□□□□□ -1.83
SED4YCR067C EDC1P53080 175 aaPredicted RBP3.63□□□□□ -1.83
SED4YCR067C MPC3P53311 146 aa3.63□□□□□ -1.83
SED4YCR067C YLR285C-AQ3E771 56 aa3.63□□□□□ -1.83
SED4YCR067C YMR122W-AQ3E842 84 aa3.63□□□□□ -1.83
SED4YCR067C TOS8P53147 276 aa3.62□□□□□ -1.83
SED4YCR067C YGL088WP53151 121 aa3.62□□□□□ -1.83
SED4YCR067C YPL278CQ08990 100 aa3.62□□□□□ -1.83
SED4YCR067C ATP20Q12233 115 aa3.62□□□□□ -1.83
SED4YCR067C YBR209WP38311 105 aa3.62□□□□□ -1.83
SED4YCR067C YOL166W-AQ8TGJ1 51 aa3.62□□□□□ -1.83
SED4YCR067C TAO3P40468 2376 aa3.62□□□□□ -1.83
SED4YCR067C IRA1P18963 3092 aa3.61□□□□□ -1.83
SED4YCR067C AIM4P38305 123 aaPredicted RBP3.61□□□□□ -1.83
SED4YCR067C YLR162WQ06235 118 aa3.61□□□□□ -1.83
SED4YCR067C YKL183C-AQ3E765 70 aa3.6□□□□□ -1.83
SED4YCR067C ERI1P62651 68 aaKnown RBP3.59□□□□□ -1.83
SED4YCR067C YNL162W-AQ3E7A8 72 aa3.59□□□□□ -1.83
SED4YCR067C YGR121W-AQ3E816 71 aa3.59□□□□□ -1.83
SED4YCR067C HHF1P02309 103 aaKnown RBP3.59□□□□□ -1.83
SED4YCR067C YRA2P36036 203 aaKnown RBP RIP-Chip data3.59□□□□□ -1.83not detected
SED4YCR067C AIR2Q12476 344 aaKnown RBP3.59□□□□□ -1.83
SED4YCR067C YGR240C-AQ3E786 66 aa3.59□□□□□ -1.83
SED4YCR067C CRC1Q12289 327 aa3.59□□□□□ -1.84
SED4YCR067C RPL36BO14455 100 aaKnown RBP3.58□□□□□ -1.84
SED4YCR067C RPL36AP05745 100 aaPredicted RBP3.58□□□□□ -1.84
SED4YCR067C ERG28P40030 148 aa3.58□□□□□ -1.84
SED4YCR067C YLR307C-AQ3E825 87 aa3.58□□□□□ -1.84
SED4YCR067C YBR126W-AQ8TGU7 68 aa3.57□□□□□ -1.84
SED4YCR067C BET1P22804 142 aa3.57□□□□□ -1.84
SED4YCR067C COX23P38824 151 aa3.57□□□□□ -1.84
SED4YCR067C YER145C-AA0A023PYF4 145 aa3.56□□□□□ -1.84
SED4YCR067C RPC10P40422 70 aa3.56□□□□□ -1.84
SED4YCR067C YOR314WQ12506 109 aa3.56□□□□□ -1.84
SED4YCR067C NOP10Q6Q547 58 aaPredicted RBP3.56□□□□□ -1.84
SED4YCR067C RPL11AP0C0W9 174 aaKnown RBP3.56□□□□□ -1.84
SED4YCR067C RSM18P40033 138 aa3.56□□□□□ -1.84
SED4YCR067C YLR281CQ05863 155 aa3.56□□□□□ -1.84
SED4YCR067C TMC1Q08422 150 aaPredicted RBP3.56□□□□□ -1.84
SED4YCR067C RPL11BQ3E757 174 aaPredicted RBP3.55□□□□□ -1.84
SED4YCR067C FMP27Q06179 2628 aa3.54□□□□□ -1.84
SED4YCR067C SFT1P43682 97 aa3.54□□□□□ -1.84
SED4YCR067C YGL260WP53056 76 aa3.54□□□□□ -1.84
SED4YCR067C MVB12P42939 101 aa3.54□□□□□ -1.84
SED4YCR067C YOL014WQ08110 124 aa3.54□□□□□ -1.84
SED4YCR067C YGR035W-AQ45U48 73 aa3.54□□□□□ -1.84
SED4YCR067C YBR056W-AI2HB52 66 aa3.53□□□□□ -1.84
SED4YCR067C Q0297Q9ZZV8 51 aa3.53□□□□□ -1.84
SED4YCR067C YMR320WQ04897 101 aa3.53□□□□□ -1.85
SED4YCR067C SPO24Q3E752 67 aa3.53□□□□□ -1.85
SED4YCR067C YFL019CP43576 117 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 32.3 ms