RNA–Protein interactions for RNA: YCR020W-B

HTL1, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene HTL1, Length 237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HTL1YCR020W-B SPC1P46965 94 aa-2.67□□□□□ -2.84
HTL1YCR020W-B NHP10Q03435 203 aa-2.68□□□□□ -2.84
HTL1YCR020W-B YMR122W-AQ3E842 84 aa-2.69□□□□□ -2.84
HTL1YCR020W-B TY1B-DR6P0C2I3 1755 aa-2.69□□□□□ -2.84
HTL1YCR020W-B TY1B-LR2P0C2I5 1755 aa-2.69□□□□□ -2.84
HTL1YCR020W-B TY1B-JR2P47100 1755 aaKnown RBP-2.69□□□□□ -2.84
HTL1YCR020W-B TY1B-MR1Q04214 1755 aa-2.69□□□□□ -2.84
HTL1YCR020W-B TY1B-MR2Q04670 1755 aaKnown RBP-2.69□□□□□ -2.84
HTL1YCR020W-B TY1B-NL1Q12112 1755 aa-2.69□□□□□ -2.84
HTL1YCR020W-B TY1B-GR1Q12141 1755 aa-2.69□□□□□ -2.84
HTL1YCR020W-B TY1B-GR3Q12316 1755 aa-2.69□□□□□ -2.84
HTL1YCR020W-B TY1B-PLQ12414 1755 aaKnown RBP-2.69□□□□□ -2.84
HTL1YCR020W-B TY1B-ORQ92393 1755 aa-2.69□□□□□ -2.84
HTL1YCR020W-B TY1B-DR5P0C2I2 1755 aa-2.71□□□□□ -2.84
HTL1YCR020W-B TY1B-PR1P0C2I9 1755 aaKnown RBP-2.71□□□□□ -2.84
HTL1YCR020W-B TY1B-JR1P47098 1755 aa-2.71□□□□□ -2.84
HTL1YCR020W-B TY1B-ML2Q03434 1755 aaKnown RBP-2.71□□□□□ -2.84
HTL1YCR020W-B TY1B-ER1Q03612 1755 aa-2.71□□□□□ -2.84
HTL1YCR020W-B TY1B-DR1Q03855 1755 aa-2.71□□□□□ -2.84
HTL1YCR020W-B TY1B-ML1Q04711 1755 aaKnown RBP-2.71□□□□□ -2.84
HTL1YCR020W-B TY1B-GR2Q12269 1755 aa-2.71□□□□□ -2.84
HTL1YCR020W-B TY1B-OLQ12273 1755 aa-2.71□□□□□ -2.84
HTL1YCR020W-B TY1B-DR3Q99231 1755 aa-2.71□□□□□ -2.84
HTL1YCR020W-B ATP18P81450 59 aa-2.71□□□□□ -2.84
HTL1YCR020W-B YPR117WQ06116 2489 aa-2.71□□□□□ -2.84
HTL1YCR020W-B UBC5P15732 148 aa-2.72□□□□□ -2.84
HTL1YCR020W-B TOR2P32600 2474 aaKnown RBP-2.72□□□□□ -2.84
HTL1YCR020W-B UBC4P15731 148 aa-2.73□□□□□ -2.85
HTL1YCR020W-B TY2B-LR1P0C2J3 1770 aa-2.74□□□□□ -2.85
HTL1YCR020W-B TY2B-FP0CX63 1770 aa-2.74□□□□□ -2.85
HTL1YCR020W-B TY2B-GR2P0CX64 1770 aa-2.74□□□□□ -2.85
HTL1YCR020W-B TY2B-CP25384 1770 aa-2.74□□□□□ -2.85
HTL1YCR020W-B TY2B-DR2Q03494 1770 aa-2.74□□□□□ -2.85
HTL1YCR020W-B TY2B-DR3Q07791 1770 aaKnown RBP-2.74□□□□□ -2.85
HTL1YCR020W-B TY2B-OR1Q12113 1770 aa-2.74□□□□□ -2.85
HTL1YCR020W-B TY2B-DR1Q12472 1770 aa-2.74□□□□□ -2.85
HTL1YCR020W-B TY2B-BQ12491 1770 aa-2.74□□□□□ -2.85
HTL1YCR020W-B TY2B-OR2Q12501 1770 aa-2.74□□□□□ -2.85
HTL1YCR020W-B STT4P37297 1900 aa-2.75□□□□□ -2.85
HTL1YCR020W-B YBR032WP38223 100 aa-2.75□□□□□ -2.85
HTL1YCR020W-B YHL005CP38752 130 aa-2.75□□□□□ -2.85
HTL1YCR020W-B YAL065CO13511 128 aa-2.76□□□□□ -2.85
HTL1YCR020W-B YHR214C-DP0CX93 97 aa-2.76□□□□□ -2.85
HTL1YCR020W-B GNA1P43577 159 aaPredicted RBP-2.76□□□□□ -2.85
HTL1YCR020W-B YCR085WP25650 117 aa-2.78□□□□□ -2.85
HTL1YCR020W-B RSM19P53733 91 aaPredicted RBP-2.79□□□□□ -2.86
HTL1YCR020W-B YPR108W-AQ3E7B3 70 aa-2.79□□□□□ -2.86
HTL1YCR020W-B BSC4P53841 131 aa-2.8□□□□□ -2.86
HTL1YCR020W-B TY3B-IQ7LHG5 1498 aaKnown RBP-2.81□□□□□ -2.86
HTL1YCR020W-B YDR182W-AQ3E796 67 aa-2.81□□□□□ -2.86
HTL1YCR020W-B YER039C-AP0CD97 72 aa-2.82□□□□□ -2.86
HTL1YCR020W-B EMC5P40540 141 aa-2.82□□□□□ -2.86
HTL1YCR020W-B TY1B-ER2Q03619 1755 aa-2.82□□□□□ -2.86
HTL1YCR020W-B TY1B-LR1Q12088 1755 aaKnown RBP-2.82□□□□□ -2.86
HTL1YCR020W-B TEL1P38110 2787 aa-2.83□□□□□ -2.86
HTL1YCR020W-B YMR103CQ04436 120 aa-2.83□□□□□ -2.86
HTL1YCR020W-B YMR090WQ04304 227 aaKnown RBP-2.85□□□□□ -2.87
HTL1YCR020W-B YOR289WQ12012 251 aaPredicted RBP-2.85□□□□□ -2.87
HTL1YCR020W-B YHR050W-AQ05451 56 aa-2.86□□□□□ -2.87
HTL1YCR020W-B SPP41P38904 1435 aa-2.87□□□□□ -2.87
HTL1YCR020W-B HMRA1P0CY11 126 aa-2.89□□□□□ -2.87
HTL1YCR020W-B YKL018C-AQ3E7A7 99 aa-2.89□□□□□ -2.87
HTL1YCR020W-B SNU13P39990 126 aaKnown RBP-2.91□□□□□ -2.88
HTL1YCR020W-B YOR008C-AQ3E7B9 74 aa-2.92□□□□□ -2.88
HTL1YCR020W-B QCR6P00127 147 aa-2.93□□□□□ -2.88
HTL1YCR020W-B YOL097W-AQ3E7Y9 61 aa-2.93□□□□□ -2.88
HTL1YCR020W-B WIP1Q2V2P8 89 aa-2.95□□□□□ -2.88
HTL1YCR020W-B ECM29P38737 1868 aa-2.95□□□□□ -2.88
HTL1YCR020W-B MEC1P38111 2368 aa-2.95□□□□□ -2.88
HTL1YCR020W-B KSH1Q8TGJ3 72 aa-2.96□□□□□ -2.88
HTL1YCR020W-B VTH1P40438 1549 aa-2.97□□□□□ -2.88
HTL1YCR020W-B VTH2P40890 1549 aa-2.97□□□□□ -2.88
HTL1YCR020W-B RRT15Q3E811 62 aa-2.97□□□□□ -2.88
HTL1YCR020W-B MOT1P32333 1867 aa-2.97□□□□□ -2.89
HTL1YCR020W-B FPR2P32472 135 aa-2.98□□□□□ -2.89
HTL1YCR020W-B YDR029WQ12111 104 aa-2.98□□□□□ -2.89
HTL1YCR020W-B DYN1P36022 4092 aa-2.99□□□□□ -2.89
HTL1YCR020W-B GEA1P47102 1408 aaPredicted RBP-2.99□□□□□ -2.89
HTL1YCR020W-B NHP2P32495 156 aaPredicted RBP-3□□□□□ -2.89
HTL1YCR020W-B YKL068W-AQ3E826 78 aa-3□□□□□ -2.89
HTL1YCR020W-B TY1B-NL2Q99337 1749 aaKnown RBP-3.01□□□□□ -2.89
HTL1YCR020W-B SPO14P36126 1683 aa-3.02□□□□□ -2.89
HTL1YCR020W-B PAU23Q07987 124 aa-3.03□□□□□ -2.89
HTL1YCR020W-B PAU17Q12370 124 aa-3.03□□□□□ -2.89
HTL1YCR020W-B TOS6P48560 102 aa-3.04□□□□□ -2.9
HTL1YCR020W-B POL1P13382 1468 aa-3.06□□□□□ -2.9
HTL1YCR020W-B MDN1Q12019 4910 aaKnown RBP-3.07□□□□□ -2.9
HTL1YCR020W-B RPS27AP35997 82 aaKnown RBP-3.07□□□□□ -2.9
HTL1YCR020W-B XRN1P22147 1528 aaKnown RBP-3.08□□□□□ -2.9
HTL1YCR020W-B YOR304C-AO14468 76 aa-3.09□□□□□ -2.9
HTL1YCR020W-B PDR11P40550 1411 aa-3.1□□□□□ -2.91
HTL1YCR020W-B LHP1P33399 275 aaKnown RBP-3.11□□□□□ -2.91
HTL1YCR020W-B SIP18P50263 79 aa-3.11□□□□□ -2.91
HTL1YCR020W-B NOP10Q6Q547 58 aaPredicted RBP-3.12□□□□□ -2.91
HTL1YCR020W-B TSC11P40061 1430 aa-3.12□□□□□ -2.91
HTL1YCR020W-B GCN1P33892 2672 aaKnown RBP-3.13□□□□□ -2.91
HTL1YCR020W-B FYV7Q12247 151 aa-3.14□□□□□ -2.91
HTL1YCR020W-B POC4Q12245 148 aaPredicted RBP-3.15□□□□□ -2.91
HTL1YCR020W-B MHF2Q3E829 80 aa-3.15□□□□□ -2.91
HTL1YCR020W-B REV3P14284 1504 aa-3.17□□□□□ -2.92
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms