RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeast

Gene SRD1, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRD1	YCR018C	CNL1	Q06333	122 aa		1	□□□□□ -2.25
SRD1	YCR018C	UTP20	P35194	2493 aa	Known RBP	0.99	□□□□□ -2.25
SRD1	YCR018C	YCR101C	P25607	182 aa		0.99	□□□□□ -2.25
SRD1	YCR018C	GNA1	P43577	159 aa	Predicted RBP	0.99	□□□□□ -2.25
SRD1	YCR018C	YOS1	Q3E834	85 aa		0.99	□□□□□ -2.25
SRD1	YCR018C	HUG1	Q6Q5K6	68 aa		0.99	□□□□□ -2.25
SRD1	YCR018C	SUS1	Q6WNK7	96 aa		0.99	□□□□□ -2.25
SRD1	YCR018C	SFT1	P43682	97 aa		0.98	□□□□□ -2.25
SRD1	YCR018C	YPR108W-A	Q3E7B3	70 aa		0.98	□□□□□ -2.25
SRD1	YCR018C	YGR035W-A	Q45U48	73 aa		0.98	□□□□□ -2.25
SRD1	YCR018C	YLR365W	Q7LIF2	110 aa		0.98	□□□□□ -2.25
SRD1	YCR018C	ROX3	P25046	220 aa		0.97	□□□□□ -2.25
SRD1	YCR018C	HYM1	P32464	399 aa		0.97	□□□□□ -2.25
SRD1	YCR018C	GSP1	P32835	219 aa	Known RBP	0.97	□□□□□ -2.25
SRD1	YCR018C	TRS20	P38334	175 aa		0.97	□□□□□ -2.25
SRD1	YCR018C	YMR141C	P40211	102 aa		0.97	□□□□□ -2.25
SRD1	YCR018C	VPS55	P47111	140 aa		0.97	□□□□□ -2.25
SRD1	YCR018C	DYN2	Q02647	92 aa		0.97	□□□□□ -2.25
SRD1	YCR018C	HOR7	Q05827	59 aa		0.97	□□□□□ -2.25
SRD1	YCR018C	SCP1	Q08873	200 aa		0.97	□□□□□ -2.25
SRD1	YCR018C	RTC6	O14464	93 aa		0.96	□□□□□ -2.26
SRD1	YCR018C	ACP1	P32463	125 aa		0.96	□□□□□ -2.26
SRD1	YCR018C	MRPL38	P35996	138 aa	Predicted RBP	0.96	□□□□□ -2.26
SRD1	YCR018C	SNU13	P39990	126 aa	Known RBP	0.96	□□□□□ -2.26
SRD1	YCR018C	SEC16	P48415	2195 aa	Known RBP	0.96	□□□□□ -2.26
SRD1	YCR018C	RPL36B	O14455	100 aa	Known RBP	0.95	□□□□□ -2.26
SRD1	YCR018C	RPL36A	P05745	100 aa	Predicted RBP	0.95	□□□□□ -2.26
SRD1	YCR018C	MRP17	P28778	131 aa		0.95	□□□□□ -2.26
SRD1	YCR018C	AUA1	P32450	94 aa		0.95	□□□□□ -2.26
SRD1	YCR018C	AIM4	P38305	123 aa	Predicted RBP	0.95	□□□□□ -2.26
SRD1	YCR018C	YHR138C	P38841	114 aa	Predicted RBP	0.95	□□□□□ -2.26
SRD1	YCR018C	YER137C	P40083	148 aa	Known RBP	0.95	□□□□□ -2.26
SRD1	YCR018C	GAT4	P40569	121 aa		0.95	□□□□□ -2.26
SRD1	YCR018C	YGR025W	P53216	100 aa		0.95	□□□□□ -2.26
SRD1	YCR018C	POC4	Q12245	148 aa	Predicted RBP	0.95	□□□□□ -2.26
SRD1	YCR018C	YGL258W-A	Q3E740	77 aa		0.95	□□□□□ -2.26
SRD1	YCR018C	COA2	Q3E823	68 aa		0.95	□□□□□ -2.26
SRD1	YCR018C	MVB12	P42939	101 aa		0.94	□□□□□ -2.26
SRD1	YCR018C	FRQ1	Q06389	190 aa		0.94	□□□□□ -2.26
SRD1	YCR018C	YLR146W-A	Q2V2P1	62 aa		0.94	□□□□□ -2.26
SRD1	YCR018C	YOR011W-A	Q3E807	68 aa		0.94	□□□□□ -2.26
SRD1	YCR018C	YBL071C	P38185	102 aa		0.93	□□□□□ -2.26
SRD1	YCR018C	LSM2	P38203	95 aa	Known RBP	0.93	□□□□□ -2.26
SRD1	YCR018C	YBR013C	P38215	129 aa		0.93	□□□□□ -2.26
SRD1	YCR018C	YEA6	P39953	335 aa		0.93	□□□□□ -2.26
SRD1	YCR018C	YFR035C	P43608	114 aa		0.93	□□□□□ -2.26
SRD1	YCR018C	MIC27	P50945	234 aa		0.93	□□□□□ -2.26
SRD1	YCR018C	YMR082C	Q04276	118 aa		0.93	□□□□□ -2.26
SRD1	YCR018C	YMR090W	Q04304	227 aa	Known RBP	0.93	□□□□□ -2.26
SRD1	YCR018C	YGL194C-A	Q2V2P6	80 aa		0.93	□□□□□ -2.26
SRD1	YCR018C	SEC59	P20048	519 aa		0.92	□□□□□ -2.26
SRD1	YCR018C	MPC2	P38857	129 aa		0.92	□□□□□ -2.26
SRD1	YCR018C	SNF11	P38956	169 aa		0.92	□□□□□ -2.26
SRD1	YCR018C	SWM2	P40342	146 aa		0.92	□□□□□ -2.26
SRD1	YCR018C	POR2	P40478	281 aa		0.92	□□□□□ -2.26
SRD1	YCR018C	IMP2	P46972	177 aa		0.92	□□□□□ -2.26
SRD1	YCR018C	ERV14	P53173	138 aa		0.92	□□□□□ -2.26
SRD1	YCR018C	SLO1	Q3E784	85 aa		0.92	□□□□□ -2.26
SRD1	YCR018C	BLM10	P43583	2143 aa		0.92	□□□□□ -2.26
SRD1	YCR018C	FPR2	P32472	135 aa		0.91	□□□□□ -2.26
SRD1	YCR018C	EMP24	P32803	203 aa	Known RBP	0.91	□□□□□ -2.26
SRD1	YCR018C	TOM7	P53507	60 aa		0.91	□□□□□ -2.26
SRD1	YCR018C	SAE3	P89114	91 aa		0.91	□□□□□ -2.26
SRD1	YCR018C	COX12	Q01519	83 aa		0.91	□□□□□ -2.26
SRD1	YCR018C	FCF2	Q12035	217 aa	Predicted RBP	0.91	□□□□□ -2.26
SRD1	YCR018C	YHR213W-A	Q8TGT4	77 aa		0.91	□□□□□ -2.26
SRD1	YCR018C	BPH1	P25356	2167 aa		0.91	□□□□□ -2.26
SRD1	YCR018C	URA2	P07259	2214 aa	Known RBP	0.91	□□□□□ -2.26
SRD1	YCR018C	QCR9	P22289	66 aa		0.9	□□□□□ -2.27
SRD1	YCR018C	YBR090C	P38253	122 aa		0.9	□□□□□ -2.27
SRD1	YCR018C	GCV3	P39726	170 aa	Predicted RBP	0.9	□□□□□ -2.27
SRD1	YCR018C	YIL163C	P40448	117 aa		0.9	□□□□□ -2.27
SRD1	YCR018C	EMC5	P40540	141 aa		0.9	□□□□□ -2.27
SRD1	YCR018C	RPS11A	P0CX47	156 aa	Known RBP	0.89	□□□□□ -2.27
SRD1	YCR018C	RPS11B	P0CX48	156 aa	Known RBP	0.89	□□□□□ -2.27
SRD1	YCR018C	MRPL31	P14063	131 aa	Predicted RBP	0.89	□□□□□ -2.27
SRD1	YCR018C	MRP49	P32388	137 aa		0.89	□□□□□ -2.27
SRD1	YCR018C	YKL044W	P36092	106 aa		0.89	□□□□□ -2.27
SRD1	YCR018C	SPI1	P40092	148 aa		0.89	□□□□□ -2.27
SRD1	YCR018C	HPA2	Q06592	156 aa		0.89	□□□□□ -2.27
SRD1	YCR018C	YPR145C-A	Q2V2P0	78 aa		0.89	□□□□□ -2.27
SRD1	YCR018C	COX19	Q3E731	98 aa		0.89	□□□□□ -2.27
SRD1	YCR018C	YJL197C-A	P0C5P0	93 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	PAU1	P0CE88	120 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	PAU14	P0CE89	120 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	PAU6	P0CE90	120 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	PAU18	P0CE91	120 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	PAU8	P0CE92	120 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	PAU11	P0CE93	120 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	YBR292C	P38357	123 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	PAU13	P38725	120 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	YHR173C	P38864	112 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	VMA7	P39111	118 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	SNN1	P48232	102 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	PAU4	P53427	120 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	AIM11	P87275	137 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	PAU10	Q03050	120 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	SGF11	Q03067	99 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	PAU20	Q08322	120 aa		0.88	□□□□□ -2.27
SRD1	YCR018C	DAD1	Q12248	94 aa		0.88	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 62.4 ms