RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A RPL36AP05745 100 aaPredicted RBP1.76□□□□□ -2.13
VMA9YCL005W-A YKR032WP36127 104 aa1.76□□□□□ -2.13
VMA9YCL005W-A YHL005CP38752 130 aa1.76□□□□□ -2.13
VMA9YCL005W-A HUA1P40325 198 aa1.76□□□□□ -2.13
VMA9YCL005W-A REE1P40893 198 aa1.76□□□□□ -2.13
VMA9YCL005W-A YFL067WP43537 175 aa1.76□□□□□ -2.13
VMA9YCL005W-A PIR5P46999 287 aa1.76□□□□□ -2.13
VMA9YCL005W-A ICS3P47034 131 aa1.76□□□□□ -2.13
VMA9YCL005W-A RPL26BP53221 127 aaKnown RBP1.76□□□□□ -2.13
VMA9YCL005W-A OST5Q92316 86 aa1.76□□□□□ -2.13
VMA9YCL005W-A YLR156WP0CE96 114 aa1.75□□□□□ -2.13
VMA9YCL005W-A YLR159WP0CE97 114 aa1.75□□□□□ -2.13
VMA9YCL005W-A YLR161WP0CE98 114 aa1.75□□□□□ -2.13
VMA9YCL005W-A HSP150P32478 413 aa1.75□□□□□ -2.13
VMA9YCL005W-A YIR020CP40575 100 aa1.75□□□□□ -2.13
VMA9YCL005W-A IMP2P46972 177 aa1.75□□□□□ -2.13
VMA9YCL005W-A RPL38P49167 78 aaKnown RBP1.75□□□□□ -2.13
VMA9YCL005W-A YGL034CP53186 121 aa1.75□□□□□ -2.13
VMA9YCL005W-A YMR175W-AQ3E766 64 aa1.75□□□□□ -2.13
VMA9YCL005W-A YOR032W-AQ8TGS1 66 aa1.75□□□□□ -2.13
VMA9YCL005W-A YAL065CO13511 128 aa1.74□□□□□ -2.13
VMA9YCL005W-A YMR141CP40211 102 aa1.74□□□□□ -2.13
VMA9YCL005W-A BLM10P43583 2143 aa1.74□□□□□ -2.13
VMA9YCL005W-A RGM1Q00453 211 aa1.74□□□□□ -2.13
VMA9YCL005W-A SMD1Q02260 146 aaPredicted RBP1.74□□□□□ -2.13
VMA9YCL005W-A SPG4Q04438 115 aa1.74□□□□□ -2.13
VMA9YCL005W-A YKR045CP36138 183 aa1.73□□□□□ -2.13
VMA9YCL005W-A MRPL39P36533 70 aa1.73□□□□□ -2.13
VMA9YCL005W-A TVP23P38962 199 aa1.73□□□□□ -2.13
VMA9YCL005W-A YEL067CP39978 195 aa1.73□□□□□ -2.13
VMA9YCL005W-A VTC1P40046 129 aaRIP-Chip data1.73□□□□□ -2.13not detected
VMA9YCL005W-A ARC15P40518 154 aaRIP-Chip data1.73□□□□□ -2.13not detected
VMA9YCL005W-A GAT4P40569 121 aa1.73□□□□□ -2.13
VMA9YCL005W-A SPC1P46965 94 aa1.73□□□□□ -2.13
VMA9YCL005W-A YGR018CP53211 109 aa1.73□□□□□ -2.13
VMA9YCL005W-A API2Q04413 109 aa1.73□□□□□ -2.13
VMA9YCL005W-A YML100W-AQ8TGT0 57 aa1.73□□□□□ -2.13
VMA9YCL005W-A HHF1P02309 103 aaKnown RBP1.72□□□□□ -2.13
VMA9YCL005W-A YDL022C-AP0C5L6 82 aa1.72□□□□□ -2.13
VMA9YCL005W-A YHR213WP0CI67 198 aa1.72□□□□□ -2.13
VMA9YCL005W-A DDR48P18899 430 aaKnown RBP1.72□□□□□ -2.13
VMA9YCL005W-A RPS27AP35997 82 aaKnown RBP1.72□□□□□ -2.13
VMA9YCL005W-A UTH1P36135 365 aa1.72□□□□□ -2.13
VMA9YCL005W-A RPS27BP38711 82 aa1.72□□□□□ -2.13
VMA9YCL005W-A YNL208WP40159 199 aaKnown RBP1.72□□□□□ -2.13
VMA9YCL005W-A POR2P40478 281 aa1.72□□□□□ -2.13
VMA9YCL005W-A PGU1P47180 361 aa1.72□□□□□ -2.13
VMA9YCL005W-A TOS8P53147 276 aa1.72□□□□□ -2.13
VMA9YCL005W-A YNL190WP53872 204 aa1.72□□□□□ -2.13
VMA9YCL005W-A SNA2P56508 79 aa1.72□□□□□ -2.13
VMA9YCL005W-A ERI1P62651 68 aaKnown RBP1.72□□□□□ -2.13
VMA9YCL005W-A ATP18P81450 59 aa1.72□□□□□ -2.13
VMA9YCL005W-A YDR274CP87283 123 aa1.72□□□□□ -2.13
VMA9YCL005W-A PMP3P87284 55 aa1.72□□□□□ -2.13
VMA9YCL005W-A MRPS8Q03799 155 aa1.72□□□□□ -2.13
VMA9YCL005W-A YMR244WQ04018 355 aa1.72□□□□□ -2.13
VMA9YCL005W-A YLR162WQ06235 118 aa1.72□□□□□ -2.13
VMA9YCL005W-A RNH203Q12338 110 aa1.72□□□□□ -2.13
VMA9YCL005W-A SPO24Q3E752 67 aa1.72□□□□□ -2.13
VMA9YCL005W-A YCR095W-AQ3E787 52 aa1.72□□□□□ -2.13
VMA9YCL005W-A YER188C-AP0C0V2 99 aa1.71□□□□□ -2.14
VMA9YCL005W-A RPS23AP0CX29 145 aaKnown RBP1.71□□□□□ -2.14
VMA9YCL005W-A RPS23BP0CX30 145 aa1.71□□□□□ -2.14
VMA9YCL005W-A FPR1P20081 114 aaKnown RBP1.71□□□□□ -2.14
VMA9YCL005W-A RPB9P27999 122 aa1.71□□□□□ -2.14
VMA9YCL005W-A MRPL38P35996 138 aaPredicted RBP1.71□□□□□ -2.14
VMA9YCL005W-A YBL081WP38180 368 aaKnown RBP1.71□□□□□ -2.14
VMA9YCL005W-A YAL064WP39711 94 aa1.71□□□□□ -2.14
VMA9YCL005W-A MIG3P39943 394 aa1.71□□□□□ -2.14
VMA9YCL005W-A YER135CP40082 130 aa1.71□□□□□ -2.14
VMA9YCL005W-A YIL102CP40488 101 aa1.71□□□□□ -2.14
VMA9YCL005W-A YFR035CP43608 114 aa1.71□□□□□ -2.14
VMA9YCL005W-A YJR085CP47131 105 aaKnown RBP1.71□□□□□ -2.14
VMA9YCL005W-A YJR146WP47174 117 aa1.71□□□□□ -2.14
VMA9YCL005W-A MRPS12P53732 153 aa1.71□□□□□ -2.14
VMA9YCL005W-A YMR122CQ03879 124 aa1.71□□□□□ -2.14
VMA9YCL005W-A YDR114CQ04597 100 aa1.71□□□□□ -2.14
VMA9YCL005W-A TMC1Q08422 150 aaPredicted RBP1.71□□□□□ -2.14
VMA9YCL005W-A YOR268CQ08734 132 aa1.71□□□□□ -2.14
VMA9YCL005W-A RRT15Q3E811 62 aa1.71□□□□□ -2.14
VMA9YCL005W-A TDA8Q6B2U8 126 aa1.71□□□□□ -2.14
VMA9YCL005W-A BEM2P39960 2167 aaKnown RBP1.71□□□□□ -2.14
VMA9YCL005W-A YLR236CA0A023PZG4 107 aa1.7□□□□□ -2.14
VMA9YCL005W-A RPS30AP0CX33 63 aaKnown RBP1.7□□□□□ -2.14
VMA9YCL005W-A RPS30BP0CX34 63 aaKnown RBP1.7□□□□□ -2.14
VMA9YCL005W-A YEL045CP32616 141 aa1.7□□□□□ -2.14
VMA9YCL005W-A YHL037CP38733 133 aa1.7□□□□□ -2.14
VMA9YCL005W-A YEL008WP40001 126 aa1.7□□□□□ -2.14
VMA9YCL005W-A SIP18P50263 79 aa1.7□□□□□ -2.14
VMA9YCL005W-A YPS5P53057 165 aa1.7□□□□□ -2.14
VMA9YCL005W-A YGL193CP53097 103 aa1.7□□□□□ -2.14
VMA9YCL005W-A YDR524C-BQ3E6R4 66 aa1.7□□□□□ -2.14
VMA9YCL005W-A SDH6Q3E785 79 aa1.7□□□□□ -2.14
VMA9YCL005W-A NOP10Q6Q547 58 aaPredicted RBP1.7□□□□□ -2.14
VMA9YCL005W-A FAS1P07149 2051 aaKnown RBP1.7□□□□□ -2.14
VMA9YCL005W-A BRR2P32639 2163 aaKnown RBP1.69□□□□□ -2.14
VMA9YCL005W-A YPR153WQ06537 140 aa1.69□□□□□ -2.14
VMA9YCL005W-A YOL160WQ08321 113 aa1.69□□□□□ -2.14
VMA9YCL005W-A YBR200W-AQ3E755 54 aa1.69□□□□□ -2.14
VMA9YCL005W-A YOR376W-AQ3E805 51 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 52 ms