RNA–Protein interactions for RNA: YBR160W

CDC28, Transcript of Cyclin-dependent kinase (CDK) catalytic subunit, yeastyeast

Gene CDC28, Length 897 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC28YBR160W TOS8P53147 276 aa3.64□□□□□ -1.83
CDC28YBR160W YMR244WQ04018 355 aa3.64□□□□□ -1.83
CDC28YBR160W PBA1Q05778 276 aa3.64□□□□□ -1.83
CDC28YBR160W YPL278CQ08990 100 aa3.64□□□□□ -1.83
CDC28YBR160W YBL112CQ3E7Y4 105 aa3.64□□□□□ -1.83
CDC28YBR160W BPH1P25356 2167 aa3.63□□□□□ -1.83
CDC28YBR160W YLR236CA0A023PZG4 107 aa3.63□□□□□ -1.83
CDC28YBR160W UBC5P15732 148 aa3.63□□□□□ -1.83
CDC28YBR160W YCR041WP37265 110 aa3.63□□□□□ -1.83
CDC28YBR160W MIG3P39943 394 aa3.63□□□□□ -1.83
CDC28YBR160W ARC15P40518 154 aaRIP-Chip data3.63□□□□□ -1.83not detected
CDC28YBR160W CAX4P53223 239 aa3.63□□□□□ -1.83
CDC28YBR160W MRPS8Q03799 155 aa3.63□□□□□ -1.83
CDC28YBR160W EMC6Q12431 108 aa3.63□□□□□ -1.83
CDC28YBR160W FMP27Q06179 2628 aa3.63□□□□□ -1.83
CDC28YBR160W ECM12O13529 151 aa3.62□□□□□ -1.83
CDC28YBR160W COX14P39103 70 aa3.62□□□□□ -1.83
CDC28YBR160W YIL059CP40520 121 aa3.62□□□□□ -1.83
CDC28YBR160W RPR2P40571 144 aa3.62□□□□□ -1.83
CDC28YBR160W PMP3P87284 55 aa3.62□□□□□ -1.83
CDC28YBR160W HOR7Q05827 59 aa3.62□□□□□ -1.83
CDC28YBR160W YLR281CQ05863 155 aa3.62□□□□□ -1.83
CDC28YBR160W CSF1Q12150 2958 aa3.62□□□□□ -1.83
CDC28YBR160W YPR117WQ06116 2489 aa3.62□□□□□ -1.83
CDC28YBR160W YBR209WP38311 105 aa3.61□□□□□ -1.83
CDC28YBR160W YGL260WP53056 76 aa3.61□□□□□ -1.83
CDC28YBR160W YGL088WP53151 121 aa3.61□□□□□ -1.83
CDC28YBR160W SPG4Q04438 115 aa3.61□□□□□ -1.83
CDC28YBR160W YDR029WQ12111 104 aa3.61□□□□□ -1.83
CDC28YBR160W SPS100P13130 326 aa3.6□□□□□ -1.83
CDC28YBR160W YSY6P38374 65 aa3.6□□□□□ -1.83
CDC28YBR160W YFR035CP43608 114 aa3.6□□□□□ -1.83
CDC28YBR160W KNH1P50112 268 aa3.6□□□□□ -1.83
CDC28YBR160W YMR295CQ03559 197 aa3.6□□□□□ -1.83
CDC28YBR160W SPO24Q3E752 67 aa3.6□□□□□ -1.83
CDC28YBR160W RPL2AP0CX45 254 aaKnown RBP3.59□□□□□ -1.83
CDC28YBR160W RPL2BP0CX46 254 aaKnown RBP3.59□□□□□ -1.83
CDC28YBR160W YHL018WP38744 120 aaPredicted RBP3.59□□□□□ -1.83
CDC28YBR160W KRE9P39005 276 aa3.59□□□□□ -1.83
CDC28YBR160W YJR107C-AP0CT86 78 aa3.58□□□□□ -1.84
CDC28YBR160W RPS11AP0CX47 156 aaKnown RBP3.58□□□□□ -1.84
CDC28YBR160W RPS11BP0CX48 156 aaKnown RBP3.58□□□□□ -1.84
CDC28YBR160W YBR219CP38317 127 aa3.58□□□□□ -1.84
CDC28YBR160W GAT4P40569 121 aa3.58□□□□□ -1.84
CDC28YBR160W IRC21Q04772 201 aa3.58□□□□□ -1.84
CDC28YBR160W TMC1Q08422 150 aaPredicted RBP3.58□□□□□ -1.84
CDC28YBR160W VAM10Q08474 114 aa3.58□□□□□ -1.84
CDC28YBR160W YLL006W-AQ3E814 58 aa3.58□□□□□ -1.84
CDC28YBR160W YER039C-AP0CD97 72 aa3.57□□□□□ -1.84
CDC28YBR160W YPS5P53057 165 aa3.57□□□□□ -1.84
CDC28YBR160W TAR1Q8TGM6 124 aa3.57□□□□□ -1.84
CDC28YBR160W IRA2P19158 3079 aa3.57□□□□□ -1.84
CDC28YBR160W YOR034C-AQ3E735 80 aa3.56□□□□□ -1.84
CDC28YBR160W YMR122W-AQ3E842 84 aa3.56□□□□□ -1.84
CDC28YBR160W RPL29P05747 59 aaPredicted RBP3.55□□□□□ -1.84
CDC28YBR160W ALG13P53178 202 aa3.55□□□□□ -1.84
CDC28YBR160W ATP18P81450 59 aa3.55□□□□□ -1.84
CDC28YBR160W SBH1P52870 82 aa3.54□□□□□ -1.84
CDC28YBR160W RSM19P53733 91 aaPredicted RBP3.54□□□□□ -1.84
CDC28YBR160W ERI1P62651 68 aaKnown RBP3.54□□□□□ -1.84
CDC28YBR160W ICY1Q04329 127 aa3.54□□□□□ -1.84
CDC28YBR160W YDL241WQ07738 123 aa3.54□□□□□ -1.84
CDC28YBR160W YLR285C-AQ3E771 56 aa3.54□□□□□ -1.84
CDC28YBR160W YAL065CO13511 128 aa3.53□□□□□ -1.84
CDC28YBR160W YER187WP40102 141 aa3.53□□□□□ -1.84
CDC28YBR160W YDR246W-AQ3E763 66 aa3.53□□□□□ -1.84
CDC28YBR160W YGR240C-AQ3E786 66 aa3.53□□□□□ -1.84
CDC28YBR160W YLR156WP0CE96 114 aa3.52□□□□□ -1.85
CDC28YBR160W YLR159WP0CE97 114 aa3.52□□□□□ -1.85
CDC28YBR160W YLR161WP0CE98 114 aa3.52□□□□□ -1.85
CDC28YBR160W YCR050CP25630 102 aa3.52□□□□□ -1.85
CDC28YBR160W MPC3P53311 146 aa3.52□□□□□ -1.85
CDC28YBR160W HAL1Q01766 294 aa3.52□□□□□ -1.85
CDC28YBR160W YMR175W-AQ3E766 64 aa3.52□□□□□ -1.85
CDC28YBR160W ERG28P40030 148 aa3.51□□□□□ -1.85
CDC28YBR160W YFL067WP43537 175 aa3.51□□□□□ -1.85
CDC28YBR160W RDS3Q06835 107 aaPredicted RBP3.51□□□□□ -1.85
CDC28YBR160W YKL183C-AQ3E765 70 aa3.51□□□□□ -1.85
CDC28YBR160W Q0297Q9ZZV8 51 aa3.51□□□□□ -1.85
CDC28YBR160W YFR009W-AP0C5M9 85 aa3.5□□□□□ -1.85
CDC28YBR160W EDC1P53080 175 aaPredicted RBP3.49□□□□□ -1.85
CDC28YBR160W TSC3Q3E790 80 aa3.49□□□□□ -1.85
CDC28YBR160W YMR230W-AQ3E7B5 62 aa3.49□□□□□ -1.85
CDC28YBR160W KTI11Q3E840 82 aa3.49□□□□□ -1.85
CDC28YBR160W IRA1P18963 3092 aa3.49□□□□□ -1.85
CDC28YBR160W RPS28BP0C0X0 67 aaKnown RBP3.48□□□□□ -1.85
CDC28YBR160W YBR121C-AP0C5L4 52 aa3.48□□□□□ -1.85
CDC28YBR160W YRA2P36036 203 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
CDC28YBR160W RPC10P40422 70 aa3.48□□□□□ -1.85
CDC28YBR160W MVB12P42939 101 aa3.48□□□□□ -1.85
CDC28YBR160W ATP20Q12233 115 aa3.48□□□□□ -1.85
CDC28YBR160W RPS28AQ3E7X9 67 aaPredicted RBP3.48□□□□□ -1.85
CDC28YBR160W UBC4P15731 148 aa3.47□□□□□ -1.85
CDC28YBR160W AIM4P38305 123 aaPredicted RBP3.47□□□□□ -1.85
CDC28YBR160W YPR010C-AA5Z2X5 72 aa3.46□□□□□ -1.86
CDC28YBR160W RPL26AP05743 127 aaKnown RBP3.46□□□□□ -1.86
CDC28YBR160W YHR212W-AP0CX91 67 aa3.46□□□□□ -1.86
CDC28YBR160W RSM18P40033 138 aa3.46□□□□□ -1.86
CDC28YBR160W TDA2P40045 126 aa3.46□□□□□ -1.86
CDC28YBR160W YFL019CP43576 117 aa3.46□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms