RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeastyeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTA1YAL043C TRP1P00912 224 aa3.07□□□□□ -1.92
PTA1YAL043C NRG2P38082 220 aa3.07□□□□□ -1.92
PTA1YAL043C RRT13P40042 185 aa3.07□□□□□ -1.92
PTA1YAL043C SPI1P40092 148 aa3.07□□□□□ -1.92
PTA1YAL043C YJR146WP47174 117 aa3.07□□□□□ -1.92
PTA1YAL043C ECM12O13529 151 aa3.07□□□□□ -1.92
PTA1YAL043C YIA6P40556 373 aa3.07□□□□□ -1.92
PTA1YAL043C FIP1P45976 327 aa3.07□□□□□ -1.92
PTA1YAL043C YMR244WQ04018 355 aa3.07□□□□□ -1.92
PTA1YAL043C SPG4Q04438 115 aa3.07□□□□□ -1.92
PTA1YAL043C KRE1P17260 313 aa3.06□□□□□ -1.92
PTA1YAL043C YEL008WP40001 126 aa3.06□□□□□ -1.92
PTA1YAL043C UTP20P35194 2493 aaKnown RBP3.06□□□□□ -1.92
PTA1YAL043C YCR001WP25347 104 aa3.05□□□□□ -1.92
PTA1YAL043C YBL081WP38180 368 aaKnown RBP3.05□□□□□ -1.92
PTA1YAL043C YNL217WP40152 326 aa3.05□□□□□ -1.92
PTA1YAL043C YGR164WP53291 111 aa3.05□□□□□ -1.92
PTA1YAL043C MRPS12P53732 153 aa3.05□□□□□ -1.92
PTA1YAL043C YNL146C-AQ3E7Z1 64 aa3.05□□□□□ -1.92
PTA1YAL043C RPS11AP0CX47 156 aaKnown RBP3.04□□□□□ -1.92
PTA1YAL043C RPS11BP0CX48 156 aaKnown RBP3.04□□□□□ -1.92
PTA1YAL043C YCR085WP25650 117 aa3.04□□□□□ -1.92
PTA1YAL043C KRE9P39005 276 aa3.04□□□□□ -1.92
PTA1YAL043C YAR029WP39549 74 aa3.04□□□□□ -1.92
PTA1YAL043C MRPS8Q03799 155 aa3.04□□□□□ -1.92
PTA1YAL043C CCW12Q12127 133 aa3.04□□□□□ -1.92
PTA1YAL043C YKL023C-AQ2V2P3 75 aa3.04□□□□□ -1.92
PTA1YAL043C SHU1P38751 150 aa3.04□□□□□ -1.92
PTA1YAL043C HAL1Q01766 294 aa3.04□□□□□ -1.92
PTA1YAL043C KSH1Q8TGJ3 72 aa3.04□□□□□ -1.92
PTA1YAL043C DIF1O13577 133 aa3.03□□□□□ -1.92
PTA1YAL043C YMR295CQ03559 197 aa3.03□□□□□ -1.92
PTA1YAL043C SHH4Q06236 168 aa3.03□□□□□ -1.92
PTA1YAL043C YDR119W-AQ2V2P9 66 aa3.03□□□□□ -1.92
PTA1YAL043C NUM1Q00402 2748 aa3.03□□□□□ -1.92
PTA1YAL043C ENV10Q99382 181 aa3.03□□□□□ -1.92
PTA1YAL043C YHR212W-AP0CX91 67 aa3.02□□□□□ -1.93
PTA1YAL043C PBA1Q05778 276 aa3.02□□□□□ -1.93
PTA1YAL043C AIM19P40502 157 aa3.02□□□□□ -1.93
PTA1YAL043C GAT4P40569 121 aa3.02□□□□□ -1.93
PTA1YAL043C YBR182C-AQ8TGU6 64 aa3.02□□□□□ -1.93
PTA1YAL043C YCR050CP25630 102 aa3.01□□□□□ -1.93
PTA1YAL043C YBR219CP38317 127 aa3.01□□□□□ -1.93
PTA1YAL043C RPB9P27999 122 aa3.01□□□□□ -1.93
PTA1YAL043C SMP1P38128 452 aa3.01□□□□□ -1.93
PTA1YAL043C PEX17P40155 199 aa3.01□□□□□ -1.93
PTA1YAL043C HUR1P45820 110 aa3.01□□□□□ -1.93
PTA1YAL043C KNH1P50112 268 aa3.01□□□□□ -1.93
PTA1YAL043C PMP3P87284 55 aa3.01□□□□□ -1.93
PTA1YAL043C YLR281CQ05863 155 aa3.01□□□□□ -1.93
PTA1YAL043C YAL063C-AQ3E791 96 aa3□□□□□ -1.93
PTA1YAL043C SVP26P38869 228 aa3□□□□□ -1.93
PTA1YAL043C ARC15P40518 154 aaRIP-Chip data3□□□□□ -1.93not detected
PTA1YAL043C YBR144CP34215 104 aa2.99□□□□□ -1.93
PTA1YAL043C YPS5P53057 165 aa2.99□□□□□ -1.93
PTA1YAL043C RPL11AP0C0W9 174 aaKnown RBP2.98□□□□□ -1.93
PTA1YAL043C YHL018WP38744 120 aaPredicted RBP2.98□□□□□ -1.93
PTA1YAL043C RPL11BQ3E757 174 aaPredicted RBP2.98□□□□□ -1.93
PTA1YAL043C YMR175W-AQ3E766 64 aa2.98□□□□□ -1.93
PTA1YAL043C CCW14O13547 238 aa2.98□□□□□ -1.93
PTA1YAL043C RPL43AP0CX25 92 aaKnown RBP2.98□□□□□ -1.93
PTA1YAL043C RPL43BP0CX26 92 aa2.98□□□□□ -1.93
PTA1YAL043C UBC4P15731 148 aa2.98□□□□□ -1.93
PTA1YAL043C SMD1Q02260 146 aaPredicted RBP2.98□□□□□ -1.93
PTA1YAL043C YHR139C-AO13536 103 aa2.97□□□□□ -1.93
PTA1YAL043C YRA2P36036 203 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
PTA1YAL043C EDC1P53080 175 aaPredicted RBP2.97□□□□□ -1.93
PTA1YAL043C VAM10Q08474 114 aa2.97□□□□□ -1.93
PTA1YAL043C YLL006W-AQ3E814 58 aa2.97□□□□□ -1.93
PTA1YAL043C YFL041W-AQ3E817 63 aa2.97□□□□□ -1.93
PTA1YAL043C SKI6P46948 246 aaPredicted RBP2.96□□□□□ -1.94
PTA1YAL043C PPT2Q12036 173 aa2.96□□□□□ -1.94
PTA1YAL043C TSC3Q3E790 80 aa2.96□□□□□ -1.94
PTA1YAL043C TOM6P33448 61 aa2.96□□□□□ -1.94
PTA1YAL043C MPC3P53311 146 aa2.96□□□□□ -1.94
PTA1YAL043C YOR376W-AQ3E805 51 aa2.96□□□□□ -1.94
PTA1YAL043C QCR8P08525 94 aa2.95□□□□□ -1.94
PTA1YAL043C RGM1Q00453 211 aa2.95□□□□□ -1.94
PTA1YAL043C RRT15Q3E811 62 aa2.95□□□□□ -1.94
PTA1YAL043C COX14P39103 70 aa2.95□□□□□ -1.94
PTA1YAL043C YAL064WP39711 94 aa2.95□□□□□ -1.94
PTA1YAL043C RPL38P49167 78 aaKnown RBP2.95□□□□□ -1.94
PTA1YAL043C YGL034CP53186 121 aa2.95□□□□□ -1.94
PTA1YAL043C SPT4P32914 102 aaPredicted RBP2.94□□□□□ -1.94
PTA1YAL043C MIC10Q96VH5 97 aa2.94□□□□□ -1.94
PTA1YAL043C YGL193CP53097 103 aa2.94□□□□□ -1.94
PTA1YAL043C YCL042WP25572 119 aa2.93□□□□□ -1.94
PTA1YAL043C MPC2P38857 129 aa2.93□□□□□ -1.94
PTA1YAL043C CRC1Q12289 327 aa2.93□□□□□ -1.94
PTA1YAL043C RPR2P40571 144 aa2.92□□□□□ -1.94
PTA1YAL043C YJR107C-AP0CT86 78 aa2.92□□□□□ -1.94
PTA1YAL043C COX12Q01519 83 aa2.92□□□□□ -1.94
PTA1YAL043C IRC21Q04772 201 aa2.92□□□□□ -1.94
PTA1YAL043C YDR381C-AQ3E6R5 114 aa2.92□□□□□ -1.94
PTA1YAL043C YLR285C-AQ3E771 56 aa2.92□□□□□ -1.94
PTA1YAL043C YPL038W-AQ3E7B4 63 aa2.92□□□□□ -1.94
PTA1YAL043C YER145C-AA0A023PYF4 145 aa2.91□□□□□ -1.94
PTA1YAL043C RSM19P53733 91 aaPredicted RBP2.91□□□□□ -1.94
PTA1YAL043C YDR274CP87283 123 aa2.91□□□□□ -1.94
PTA1YAL043C YMR122W-AQ3E842 84 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms