RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 ARID5AQ03989 594 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 ASIC2Q16515 512 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 CCDC142Q17RM4 750 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 SFMBT2Q5VUG0 894 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 SDHAF4Q5VUM1 108 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 SPECC1LQ69YQ0 1117 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 SARM1Q6SZW1 724 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 TRIM72Q6ZMU5 477 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 PIGZQ86VD9 579 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 DRC7Q8IY82 874 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 FAM71AQ8IYT1 594 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 TMEM35BQ8NCS4 154 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 GPR152Q8TDT2 470 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 ANP32BQ92688 251 aaKnown RBP6.73□□□□□ -1.33
SF3B1-206ENST00000462613 NXPE3Q969Y0 559 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 E2F7Q96AV8 911 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 HSFY1Q96LI6 401 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 NAP1L5Q96NT1 182 aaPredicted RBP6.73□□□□□ -1.33
SF3B1-206ENST00000462613 KCNK16Q96T55 309 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 GANQ9H2C0 597 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 TASP1Q9H6P5 420 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 CYLDQ9NQC7 956 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 SEPT11Q9NVA2 429 aaKnown RBP6.73□□□□□ -1.33
SF3B1-206ENST00000462613 HCFC1R1Q9NWW0 138 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 CDH7Q9ULB5 785 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 BZW2Q9Y6E2 419 aaKnown RBP6.73□□□□□ -1.33
SF3B1-206ENST00000462613 NCANO14594 1321 aa6.73□□□□□ -1.33
SF3B1-206ENST00000462613 KIF26AQ9ULI4 1882 aaPredicted RBP6.73□□□□□ -1.33
SF3B1-206ENST00000462613 A0A1W2PQJ5 194 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 RNF225M0QZC1 329 aaPredicted RBP6.72□□□□□ -1.33
SF3B1-206ENST00000462613 FBXO21O94952 628 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 SLC34A2O95436 690 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 LSM8O95777 96 aaKnown RBP6.72□□□□□ -1.33
SF3B1-206ENST00000462613 CKMP06732 381 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 USP17L7P0C7H9 530 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 DESP17661 470 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 TNFAIP3P21580 790 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 SP100P23497 879 aaPredicted RBP6.72□□□□□ -1.33
SF3B1-206ENST00000462613 CLCN1P35523 988 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 GPR15P49685 360 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 KLK7P49862 253 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 TKTL1P51854 596 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 NTHL1P78549 312 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 ZBED6P86452 979 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 APBA1Q02410 837 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 PDE4CQ08493 712 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 ADIGQ0VDE8 80 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 TAF10Q12962 218 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 TEAD2Q15562 447 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 TDRD12Q587J7 1177 aaKnown RBP6.72□□□□□ -1.33
SF3B1-206ENST00000462613 PRSS36Q5K4E3 855 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 GPR158Q5T848 1215 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 TOGARAM2Q6ZUX3 1019 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 PAQR9Q6ZVX9 377 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 RSRC2Q7L4I2 434 aaKnown RBP6.72□□□□□ -1.33
SF3B1-206ENST00000462613 SLC47A2Q86VL8 602 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 MON1AQ86VX9 555 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 DDX42Q86XP3 938 aaKnown RBP eCLIP6.72□□□□□ -1.33
SF3B1-206ENST00000462613 CNGA4Q8IV77 575 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 YAF2Q8IY57 180 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 ZDHHC14Q8IZN3 488 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 HS6ST3Q8IZP7 471 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 UBA3Q8TBC4 463 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 EPS8L1Q8TE68 723 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 STK32AQ8WU08 396 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 RNF139Q8WU17 664 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 CPLX3Q8WVH0 158 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 ING5Q8WYH8 240 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 KCTD13Q8WZ19 329 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 TFAP2BQ92481 460 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 FGF13Q92913 245 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 MCRS1Q96EZ8 462 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 SMOQ99835 787 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 TTLL2Q9BWV7 592 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 NAA15Q9BXJ9 866 aaKnown RBP6.72□□□□□ -1.33
SF3B1-206ENST00000462613 RBSNQ9H1K0 784 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 LHX5Q9H2C1 402 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 KIF9Q9HAQ2 790 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 ZFP14Q9HCL3 533 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 TRPC7Q9HCX4 862 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 CNGB3Q9NQW8 809 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 OLA1Q9NTK5 396 aaKnown RBP6.72□□□□□ -1.33
SF3B1-206ENST00000462613 IGSF9Q9P2J2 1179 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 NAGPAQ9UK23 515 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 PCDHGC3Q9UN70 934 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 REV3LO60673 3130 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 SZT2Q5T011 3432 aa6.72□□□□□ -1.33
SF3B1-206ENST00000462613 NCOR1O75376 2440 aa6.71□□□□□ -1.33
SF3B1-206ENST00000462613 CDH23Q9H251 3354 aa6.71□□□□□ -1.33
SF3B1-206ENST00000462613 LRRC53A6NM62 1247 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 CAPN9O14815 690 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 BEST1O76090 585 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 ZBED1O96006 694 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 PNMA6AP0CW24 399 aaPredicted RBP6.71□□□□□ -1.34
SF3B1-206ENST00000462613 LAMP2P13473 410 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 BMP1P13497 986 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 LCP1P13796 627 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 HMGA1P17096 107 aaKnown RBP6.71□□□□□ -1.34
SF3B1-206ENST00000462613 CEBPBP17676 345 aa6.71□□□□□ -1.34
SF3B1-206ENST00000462613 HDCP19113 662 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms